GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000410-TA|BGIBMGA000410-PA|undefined
         (519 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1754|AAF54984.1| 1481|Drosophila melanogaster CG14365-P...    33   1.3  
AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-P...    32   2.2  

>AE014297-1754|AAF54984.1| 1481|Drosophila melanogaster CG14365-PA
            protein.
          Length = 1481

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 361  ATNDVTKVGDDCSTSFKRVDSGFNENTFYASTSYYESAIKPSELTVTNISKSNVTNNALK 420
            +T+ + ++G+  +T+ + + S  N N    S  YY S + P+   + N    +     + 
Sbjct: 1115 STDSIQQLGEAGATALRIIHSRNNSNISTQSAPYYYSEL-PAPPPLNNQRDIHAHGLNIA 1173

Query: 421  EISNV---HWMRVDSGFKDENSADSIQFYPGNENSVKKFSN 458
             I N    H   VD+    + + DS   Y G +++ +K SN
Sbjct: 1174 HIHNPIDRHQFNVDALVDKDQAIDSKNIYCGQKDNNEKLSN 1214


>AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-PA
           protein.
          Length = 2291

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 222 SMDISFEESAHDQSQADSESSSHPDAQATWSIVEETNAQQAVRDGCIKLQTNE 274
           S D    ES+ D S+ D E     D     S + E N  ++ +  C KL T +
Sbjct: 445 SSDSDSSESSSDTSEWDDEYDEEEDYDTDRSTIREKNVFESGKQSCAKLSTGD 497


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.312    0.126    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,957,318
Number of Sequences: 52641
Number of extensions: 892299
Number of successful extensions: 2307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2306
Number of HSP's gapped (non-prelim): 2
length of query: 519
length of database: 24,830,863
effective HSP length: 88
effective length of query: 431
effective length of database: 20,198,455
effective search space: 8705534105
effective search space used: 8705534105
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)