Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000408-TA|BGIBMGA000408-PA|IPR000719|Protein kinase,
IPR013543|Calcium/calmodulin dependent protein kinase II,
association-domain, IPR011009|Protein kinase-like,
IPR008271|Serine/threonine protein kinase, active site,
IPR002290|Serine/threonine protein kinase
         (510 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    45   1e-06

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 44.8 bits (101), Expect = 1e-06
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 6/115 (5%)

Query: 121 QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDQQAWFGFAG- 179
           +Q+   + H     VVHRDL   N+L+    +   VK++DFGL+ +V  D        G 
Sbjct: 599 RQVALGMEHLAKTRVVHRDLAARNVLV---CENHTVKVSDFGLSRDVYQDNVYCKNGGGK 655

Query: 180 -TPGYLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQYRLYAQIKAG 232
               +++ E L  + Y    D+W+ GV+L+ I+ +G  P+       L   +K+G
Sbjct: 656 LPVRWMALESLTHQRYTTYSDVWSFGVLLWEIVTLGGTPYVGVHSSELLDFLKSG 710



 Score = 32.3 bits (70), Expect = 0.008
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 23  LGKGAFSIVRRA---VQKSTGYEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVR 78
           +G+GAF IVRRA   +++    + A K++     S  + ++  +E  I + + QHP IV 
Sbjct: 457 IGEGAFGIVRRAFLDLKEDNKTQVAVKMLKESPTS-EEIRQFTQEINIMKSVRQHPYIVS 515

Query: 79  LHDSIQEEHCH--YLVFDLVTGGEL 101
           L   + E       LV +  + G+L
Sbjct: 516 LIGCVTEGRAEGPLLVVEYCSRGDL 540


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.134    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,266
Number of Sequences: 317
Number of extensions: 4877
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 2
length of query: 510
length of database: 114,650
effective HSP length: 60
effective length of query: 450
effective length of database: 95,630
effective search space: 43033500
effective search space used: 43033500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)