GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000407-TA|BGIBMGA000407-PA|IPR006627|Protein of unknown
function TDU
         (333 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   1.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   1.3  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   3.9  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   3.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   5.2  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    24   6.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.1  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 200 LGDDYMNLFKKNSENAQPGPKP 221
           L  +++N  KK SE A PG KP
Sbjct: 880 LSINHVNSLKKESETAAPGEKP 901


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 246 AMEIDDPSLSVDDHFAKALGDTWRQLQTSKSKENEKTQLNHKGGVDDHFSKALGETWQKI 305
           A E DD S S     + +  D+     +S S   E+ + N K    + + K   E  ++ 
Sbjct: 359 ANETDDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAE-NFKISTAEQYKKQAKEVERRG 417

Query: 306 QSSKHNLNSDNEKK 319
             ++ +LN+  EK+
Sbjct: 418 NRNRRDLNAFKEKQ 431



 Score = 25.4 bits (53), Expect = 2.2
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 41  SPEKETPSTASSGESEGDRTLSPETPRSQSKEATGKWRRERRSI 84
           S   ++ S++S  E+E  +  + E  + Q+KE   +  R RR +
Sbjct: 381 SSSSDSSSSSSEEEAENFKISTAEQYKKQAKEVERRGNRNRRDL 424


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)

Query: 3    LPHHLLLLAQTSLRLHLLSMEPPQSP 28
            LPH  L L    L+LH +  EPPQ P
Sbjct: 1028 LPHWQLQLKP--LKLHEIPEEPPQEP 1051


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 41  SPEKETPSTASSGESEGDRTLSPETPRSQSKEATGKWRRERRSI 84
           S   ++ S++S  E+E  +    E  + Q+KE   +  R RR +
Sbjct: 381 SSSSDSSSSSSEEEAENFKISPAEQYKKQAKEVERRGNRNRRDL 424


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 249 IDDPSLSVDDHFAKALGDTWRQL--QTSKSKENEK 281
           + +P+ S D +   ALG+ W Q   Q ++ KE EK
Sbjct: 591 LKNPATSSDAYSLIALGNFWLQSLHQPNRDKEKEK 625


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 66  PRSQSKEATGKWRRERRSIRLPEYRPKENGKMALRSQSFNERRTVVPFTRAQPHSDGDLS 125
           PR    ++   +R++ R    PEY     G +A + + +++ RT+V     QP       
Sbjct: 116 PRRTGMDSFVYYRKQHR----PEYFKGYGGLLAEQGEDWHKMRTIVNPIMMQPKVIRQYV 171

Query: 126 DETD 129
           D+ D
Sbjct: 172 DKVD 175


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 288  GGVDDHFSKALGETWQKIQSSKHNLNSDNEK 318
            G +++HF  ALG +   +QS + + N ++ K
Sbjct: 2440 GVLNNHFMTALGRSAGDVQSYEIDANGNHRK 2470


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.128    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,598
Number of Sequences: 2123
Number of extensions: 14700
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 36
Number of HSP's gapped (non-prelim): 9
length of query: 333
length of database: 516,269
effective HSP length: 64
effective length of query: 269
effective length of database: 380,397
effective search space: 102326793
effective search space used: 102326793
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 48 (23.4 bits)