Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000406-TA|BGIBMGA000406-PA|IPR001452|Src homology-3
(294 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 51 1e-06
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23) 49 5e-06
SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20) 47 2e-05
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 46 3e-05
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_54348| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 43 3e-04
SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40) 43 3e-04
SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17) 42 5e-04
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 42 5e-04
SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 42 8e-04
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 40 0.002
SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20) 40 0.002
SB_2813| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 40 0.002
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16) 38 0.010
SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 37 0.022
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_40386| Best HMM Match : BAR (HMM E-Value=0) 36 0.039
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 36 0.052
SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24) 36 0.052
SB_50533| Best HMM Match : SH3_2 (HMM E-Value=2.3e-05) 35 0.069
SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_42698| Best HMM Match : SH3_1 (HMM E-Value=5.2e-16) 34 0.12
SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038) 33 0.21
SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_15896| Best HMM Match : SH3_1 (HMM E-Value=0.00055) 33 0.28
SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 32 0.48
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.64
SB_54055| Best HMM Match : SH3_1 (HMM E-Value=0.018) 32 0.64
SB_29076| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) 31 1.1
SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12) 31 1.1
SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 31 1.1
SB_10886| Best HMM Match : SH3_1 (HMM E-Value=2.8e-19) 31 1.1
SB_8979| Best HMM Match : SH3_1 (HMM E-Value=3.6e-05) 31 1.1
SB_25705| Best HMM Match : PH (HMM E-Value=2e-17) 31 1.5
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 30 1.9
SB_8922| Best HMM Match : SH3_1 (HMM E-Value=0.19) 30 1.9
SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10) 30 2.6
SB_38378| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 3.4
SB_39254| Best HMM Match : GRP (HMM E-Value=3.3) 29 4.5
SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9) 29 4.5
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_4546| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_34642| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14) 29 6.0
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17) 29 6.0
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 37 PTNLYVILYNFKSRHADELDLKAGYKVTVID---TSDPDWWKGKCLGKIGYFPSKYCTKL 93
P Y +LY F+ R+ DE+++ VTV T+ P W +GKC GK G FP+ Y K+
Sbjct: 12 PLEYYRVLYAFEPRNPDEIEVNEDDIVTVDHDNCTAPPGWLRGKCHGKTGLFPANYAEKI 71
Query: 94 QAGE 97
E
Sbjct: 72 SEEE 75
Score = 34.7 bits (76), Expect = 0.091
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 35 LLPTNLYVI-LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
L P L I LY ++ + D L + + + D WW G+ GK G+FP Y
Sbjct: 131 LAPQGLTAIALYPYRGKKDDMLSFNKNDIIAIKEQQDT-WWSGELNGKKGWFPKTY 185
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 66 IDTSDPDWWKGKCLGKIGYFPSKYCTKLQA 95
I + +WW+G+ G FP+ Y K +A
Sbjct: 206 ITKDEGEWWEGRLRENYGLFPANYVKKKEA 235
>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 38 TNLYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLG--KIGYFPSKY 89
TN+++ LY++ +R ++L K G ++ ++D +D DWW K L + GY PS Y
Sbjct: 77 TNIFMALYDYDARTNEDLSFKKGERLQLLDNTDGDWWLAKSLSTDQEGYIPSNY 130
>SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23)
Length = 936
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 42 VILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKC--LGKIGYFPSKYCTK 92
V LY+F ++ A EL+ K G + V+D D +WWKG+ G+ G FP Y T+
Sbjct: 4 VALYDFVAQEAGELNFKKGNHIEVLDKEDDNWWKGRVAETGEEGLFPRNYETR 56
>SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)
Length = 524
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 33 QRLLPTNLYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCL-GKIGYFPSKY 89
Q P +++Y +++ ADEL + G +TV+ + +WW G+ G+ GYFPS Y
Sbjct: 304 QAAQPKKQVLVMYPYEANRADELTITPGDVITVLYQDNENWWMGELADGRQGYFPSNY 361
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 43 ILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTKLQAGERP 99
+L+++++ +ADEL L G ++ VI + WW+G G+ G FPS + E P
Sbjct: 10 VLFDYEAENADELSLVTGIEINVIREVEDGWWEGTVDGRKGVFPSNFVKLKPIDETP 66
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 43 ILYNFKSRHADELDLKAGYKVTVIDT---SDPDWWKGKCLGKIGYFPSKY 89
+ Y+++ ++ DEL+LK G +T++ P W +G+ GK G FP +
Sbjct: 221 VTYDYEQQNEDELELKVGDIITIVKKEVFDTPGWMEGELDGKTGLFPDNF 270
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 46.4 bits (105), Expect = 3e-05
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 40 LYVILYNFKSRHADELDLKAGYKVTVI-DTSDPDWWKGKCL--GKIGYFPSKYC---TKL 93
L+V LY++++R ++L K G K+ V+ D DWW+ + L ++GY PS Y + L
Sbjct: 63 LFVALYDYEARTDEDLSFKKGEKLEVVNDLDGGDWWQARSLVSNQVGYIPSNYVAPQSSL 122
Query: 94 QAGE------RPLQVTHNLQVSDGDNGLMLLRDQIVIQVGDEVDGMVMIRSGDN 141
Q+ E R + L + G++G L+R+ D + +R GDN
Sbjct: 123 QSEEWFFGAIRRVD-AEKLLIMHGESGSFLIRE----SESKPGDYSLSLRDGDN 171
>SB_54348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 41 YVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCL--GKIGYFPSKYCTKLQAGER 98
+V + F RH DE++L G + V T + W +G L G+ G FPS+Y + +R
Sbjct: 184 HVATHKFIMRHNDEINLDEGDPMMVYQTCEDLWCEGTNLRTGQCGVFPSRYVASILNSQR 243
Query: 99 PLQVTHNLQVSDG 111
Q H+L G
Sbjct: 244 KRQAIHSLTSRSG 256
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
LY F++R+ DEL G ++ V D DW++G G G FP Y
Sbjct: 210 LYGFEARNKDELSFPMGAEIVVTKDVDNDWYEGTFEGDTGLFPKSY 255
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKC-LGKIGYFPSKYCTKL 93
LY+F + H+ +L+L G +TV+ D +W +G+ G G P Y L
Sbjct: 362 LYHFSALHSGDLELSEGDVITVLKIVDDNWLEGRLQSGVSGTCPIAYLEPL 412
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 42 VILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFP 86
V + ++ ++ E+ LK G V V++ +W +G G IG FP
Sbjct: 129 VAIQSYSAQRPGEISLKKGDFVKVLEEIGNNWLRGDINGTIGIFP 173
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTKL 93
LY F + + EL K G + V+ D W+ + K G FP Y K+
Sbjct: 69 LYPFTATSSAELTAKEGDILKVLSHFDEHWYNCELNSKKGLFPISYTEKI 118
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
+Y F + + EL K G + + + + W G+ GK G FP+ +
Sbjct: 279 IYPFVAENDSELTFKEGEIIQLRERAGSQWLIGELGGKTGRFPASF 324
>SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40)
Length = 313
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 42 VILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
+ LY+F DEL + AG + +++ + DW KG G G FPS Y
Sbjct: 190 IALYSFTGESEDELTMWAGDTIQLLEIVNDDWLKGSLNGNTGIFPSSY 237
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 42 VILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTKLQAGERPLQ 101
+ L++++S +L +AG ++ ++ D DW+ G+ K G P + ++ + P
Sbjct: 36 IALFDYESGADGDLTFQAGDEIALLQRVDKDWYVGRRGDKEGMMPVSFVEIIE--DLPPD 93
Query: 102 VTHNLQVSDGD----NGLMLLRDQIVIQVGD 128
QVS G N L+ L D + + V D
Sbjct: 94 SKPVKQVSTGIKRSLNVLVCLADGLNVTVRD 124
>SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17)
Length = 288
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 40 LYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCL--GKIGYFPSKY 89
LY LYN+K + DEL+LK G V++ W+KG L K G FP Y
Sbjct: 72 LYTALYNYKPQKEDELELKQGECYYVLEKCKDGWFKGVSLHSQKRGVFPGNY 123
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 42.3 bits (95), Expect = 5e-04
Identities = 15/54 (27%), Positives = 35/54 (64%)
Query: 42 VILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTKLQA 95
V LY+++ + A E+ +K G +T++++++ DWWK + + G+ P+ Y ++ +
Sbjct: 854 VALYDYQEKTAREVSMKKGDILTLLNSTNKDWWKVETNDRQGFVPAAYVKRIDS 907
>SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 40 LYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCL--GKIGYFPSKY 89
LY LYN+K + DEL+LK G V++ W+KG L K G FP Y
Sbjct: 72 LYTALYNYKPQKEDELELKQGECYYVLEKCKDGWFKGVSLHSQKRGVFPGNY 123
>SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 893
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 38 TNLYVILYNFKSRHADELDLKAGYKVTVID-----TSDPDWWKGKCLG--KIGYFPSKYC 90
++L + LY++++ DEL KA + ++ + D DWW G+ G KIG FP+ Y
Sbjct: 19 SDLCIALYDYEAAEEDELSFKANECIELLSKDPEISGDEDWWVGRVDGQEKIGLFPANYV 78
Query: 91 T 91
T
Sbjct: 79 T 79
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 41 YVILYNFKSRHADELDLKAGYKVTVIDTSDPDW-WKGKCLGKIGYFPSKY 89
YV L++F + D++ G VTV++ DPDW W K G G+ P ++
Sbjct: 1893 YVALWDFNATAEDDITASKGDVVTVLNKDDPDWYWVVKRSGDEGFIPKEF 1942
>SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 793
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 40 LYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGK-CLGKIGYFPSKYCTK 92
L V+LY+F++ DEL + ++ +++ W KG+ GK+G+FP Y K
Sbjct: 435 LCVVLYSFEATTEDELSITEHEELELLEIDGEGWCKGRNKAGKVGFFPEAYVEK 488
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 37 PTNLYVI--LYNFKSRHADELDLKAGYKVTVIDTSD----PDWWKGKCLGKIGYFPSKYC 90
PT L ++ LY++++ +EL G + V D +W+G G G FPS
Sbjct: 558 PTYLCMVRALYDYEAMSDEELSFNEGDTIYVTKQDDHGVDDGFWEGYIDGHKGVFPSLVV 617
Query: 91 TKLQAGERPLQVT 103
+++ P VT
Sbjct: 618 EEIEGSASPPPVT 630
>SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20)
Length = 300
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTKL 93
++ + ++ DEL G V+ + D +WWKG+ G++G FPS Y L
Sbjct: 240 MFPYTAQKGDELTFYKGSVFNVM-SKDGEWWKGELNGQVGMFPSNYVQSL 288
>SB_2813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1362
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
L++ + +EL +AG +TVI ++ DWW G+ ++G+FP+ +
Sbjct: 869 LWDHVTMDPEELTFRAGDVITVISMTNVDWWFGQVRDQVGWFPAPF 914
>SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 41 YVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
YV++ ++K +L+L+AG V VI ++ WW G++G+ P+ Y
Sbjct: 138 YVVITDYKKTQQKDLNLRAGNVVDVIQKNEHGWWFVDLDGELGWVPASY 186
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 45 YNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
++++ H DEL L G + V++ WWKG + G+FPS Y
Sbjct: 211 FSYQPIHVDELQLTKGDLIHVLEKEGDGWWKGFIGTRQGWFPSNY 255
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 39 NLYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKI-GYFPSKYCTKLQA 95
++ + LY++K+ +EL +K K+ ++D S WWK + + GY PS Y + A
Sbjct: 104 SIAIALYDYKAHEKEELSIKKNDKLVIVDDSQ-TWWKVRNDQNVEGYVPSNYVGRKDA 160
Score = 37.5 bits (83), Expect = 0.013
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 36 LPTNLYVILYNFKSRHADELDLKAGYKVTVI--DTSDPDWWKGKCL-GKIGYFPSKYCTK 92
+P + LY F+S +++EL+ + G + VI DPDWW K G G P Y K
Sbjct: 266 VPLLKVITLYQFQSPNSEELNFEKGEVLDVIKQPDGDPDWWFAKKQDGSKGLVPKNY-VK 324
Query: 93 LQAGERPLQVT 103
+ E+P T
Sbjct: 325 PVSDEQPTTPT 335
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTKL 93
+Y++++ +DEL + G +TV D WW+G + G FP+ Y ++
Sbjct: 568 IYDYQATQSDELTIHPGDIITVTARLDNGWWQGDLNNQQGIFPASYVEEI 617
>SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)
Length = 299
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 44 LYNFKSRHADELDLKAGYKVTVI-DTSDPDWWKGKCLGKIGYFPSKYCTKL 93
LY++++ DEL KAG VT + + D W +G+ + G FP++Y L
Sbjct: 249 LYDYEAAEDDELSFKAGEIVTKLSERDDQGWCRGRINHRTGLFPAEYVEAL 299
>SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 41 YVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKG-KCLG-KIGYFPSKY 89
Y+ ++ F++ DE+DL+ G V V+ W++G +C G ++G FP +
Sbjct: 8 YIAIHEFQTTRDDEIDLQKGDVVLVVKKYQDGWFRGVRCRGYQVGCFPGNF 58
>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 40 LYVILYNFKSRHADELDLKAGYKVTV-IDTSDPDWWKGKC--LGKIGYFPSKYCTKLQAG 96
LY+ LY++ +R ++L K G + V D DWW+ K G GY P Y ++
Sbjct: 72 LYLALYDYDARTQEDLSFKKGEVLEVNPDDLANDWWRAKSRDTGAEGYIPMNYVAPMETL 131
Query: 97 E 97
E
Sbjct: 132 E 132
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 42 VILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTKLQAGERPL 100
V + ++ + +L + G K+ V+ DWW + G GY P Y T + R L
Sbjct: 51 VAIGDYTANDKSQLSFEKGQKLVVLSKETKDWWWVELEGSCGYIPVSYVTSEEVHRRNL 109
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 36.7 bits (81), Expect = 0.022
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 55 LDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTK 92
LD G V V+D + WW GK G G+ PS Y K
Sbjct: 217 LDFSKGASVEVLDKNPNGWWYGKIDGNEGWIPSSYLGK 254
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 39 NLYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTKL 93
++YV L ++ D + G ++ V+ D WW K K G+ PS + +L
Sbjct: 650 HVYVALASYHDEDDDAISFDEGDEMEVVQQDDSGWWLVKIADKSGWAPSNFLKQL 704
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
LY++ +R + EL K G + V + DWW G G+ P+ Y
Sbjct: 723 LYDYSARSSKELSFKKGDIIRVFKRFNDDWWDGTLGDSDGFVPASY 768
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 36.3 bits (80), Expect = 0.030
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 41 YVILYNFKSRHADELDLKAGYKVTVIDTSDPDWW--KGKCLGKIGYFPSKYCTKLQAGER 98
+V + NF R+ EL ++ G + V+D +D + W + G +G+ P+ Y G+
Sbjct: 5326 FVSVCNFTPRNPGELGIREGDVIDVLDDNDTETWLVASETTGAVGWVPAFYLEPETRGKE 5385
Query: 99 PL 100
P+
Sbjct: 5386 PI 5387
>SB_40386| Best HMM Match : BAR (HMM E-Value=0)
Length = 369
Score = 35.9 bits (79), Expect = 0.039
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 45 YNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPS 87
+++K++ EL G +T+ D +W++G GK G FPS
Sbjct: 311 FDYKAKKEGELSFTEGQIITLSGKRDDEWYEGTLDGKFGIFPS 353
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 53 DELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKYCTKLQ 94
DE+ +T I+ D WW G C G+ G FP+ Y + Q
Sbjct: 686 DEITFDPDDIITDIEKIDDGWWMGTCNGQRGLFPANYVEENQ 727
>SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24)
Length = 581
Score = 35.5 bits (78), Expect = 0.052
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 36 LPTNLYVILYNFKSRHADELDLKAGYKVTVIDTSDPD-WWKGKCLGKIGYFPSKYCTK 92
LP ++LY+F++ D++ + G V V++ D D WW G G+ P Y +K
Sbjct: 306 LPHFKAMVLYDFEACAEDDVSVTKGDVVNVLNRDDDDWWWVTTPRGGEGFVPCSYLSK 363
>SB_50533| Best HMM Match : SH3_2 (HMM E-Value=2.3e-05)
Length = 156
Score = 35.1 bits (77), Expect = 0.069
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 43 ILYNFKSRHADELDLKAGYKVTVIDTSDPD--WWKGKCLGKIGYFPSKYCTKL 93
++ + K+ DELDL AG +T + SD +W G GK G+FP K C ++
Sbjct: 10 VITDHKTLMDDELDLNAGDIITNVRMSDLSISYWMGTLKGKRGFFP-KDCVEV 61
>SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 43 ILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPS 87
+LY+F++R++ EL +K ++ V+D S W G IG+ P+
Sbjct: 342 VLYDFQARNSRELSVKQNEELVVLDDSRQWWCVRNSEGAIGFIPN 386
>SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 35.1 bits (77), Expect = 0.069
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 43 ILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
+LY+F+ R +L L G V ++ D +W++G+ G G+ PS Y
Sbjct: 210 VLYDFEPREQGDLALCKGDFVYLLRQVDENWFEGQVNGCQGFLPSNY 256
>SB_42698| Best HMM Match : SH3_1 (HMM E-Value=5.2e-16)
Length = 505
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
L +F+ DEL + +T+I D W G+ G G+FP+K+
Sbjct: 125 LLDFERHDDDELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKF 170
>SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038)
Length = 274
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 70 DPDWWKGKCLGKIGYFPSKYCTKLQAG-ERPLQVT 103
D WW+G GK G+FPS Y ++ A E P+ T
Sbjct: 3 DGGWWEGTLNGKNGWFPSNYVKEISASPEIPVTPT 37
>SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 41 YVILYNFKSRHADELDLKAGYKVTV---IDTS-DPDWWKGKCLGKIGYFPSKY 89
Y+ L F+ ++A E+ + G VTV DTS + +WW G+ GY P +
Sbjct: 311 YIALCTFEGQNAGEISVNEGDLVTVQRRCDTSGNTEWWLVSYHGRKGYIPGDF 363
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 40 LYVILYNFKSRHADELDLKAGYKVTVIDTSD----PDWWKGKCLGKIGYFPSKYCTKLQ 94
+Y ++F+ E+ + AG VTV+ D P+WW + GK GY + + +
Sbjct: 401 VYFAQFDFEGTSEAEVSIDAGQLVTVLQKHDLEGNPEWWLVEAEGKRGYVAADFLASFE 459
>SB_15896| Best HMM Match : SH3_1 (HMM E-Value=0.00055)
Length = 300
Score = 33.1 bits (72), Expect = 0.28
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 42 VILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGK 77
V LY++ + ++ L+AG ++ + T+D WW+ K
Sbjct: 70 VALYDYAGENDGDMPLRAGDRIEIKSTADDSWWEWK 105
>SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 789
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 139 GDNRQGVCPIKFLQEKRGSLTDESKFYHPPKMIQSAPVTPCDSESTWSERNWSKYNNGSS 198
G +Q P + ++++ P Q +P T D S + YN G++
Sbjct: 184 GSYQQNASPNSYGSNTAAGSERNNQYWSSPNSNQYSPNTGSDQYG--SNTGVNSYNRGNA 241
Query: 199 PTYVRSGYDKYDSYIGNDSTGLDEDGHRVY 228
+ S Y + SY D++ + G+ Y
Sbjct: 242 ASSTNSNYGQTSSYPNGDNSTVSNSGYSSY 271
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 31.9 bits (69), Expect = 0.64
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPD--WWKGKCLGKIGYFPSKYCTKLQ 94
+Y++ ++ + L K G + +ID D + W G GYFP++Y T ++
Sbjct: 1519 MYDYVTQEPNLLSFKKGDVIQIIDKPDIEEGWLFGVFASNNGYFPAEYVTHIK 1571
>SB_54055| Best HMM Match : SH3_1 (HMM E-Value=0.018)
Length = 103
Score = 31.9 bits (69), Expect = 0.64
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 42 VILYNFKSRHADELDLKAGYKVTVIDTSDPDWWK 75
V LY++ + ++ L+AG ++ + T+D WW+
Sbjct: 70 VALYDYAGENDGDMPLRAGDRIEIKSTADDSWWE 103
>SB_29076| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 38 TNLYVILYNFKSRHADELDLKAGYKVTVIDTSDPD----WWKGKCLGKIGYFPSKYCTKL 93
T L LY+ + ADEL + G +TV++ D D WW G+ G P T++
Sbjct: 1 TVLAKALYDNIADSADELTFRKGDVITVLE-KDIDGLFGWWLCSLHGRQGIAPGNRLTEI 59
Query: 94 QAGER 98
AG R
Sbjct: 60 GAGPR 64
>SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13)
Length = 803
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
LY ++++ EL KA + + D W G+ GK G FP ++
Sbjct: 369 LYEYEAQGDQELSFKASDIIRFLYEEDDTWCCGELNGKKGMFPKEF 414
>SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12)
Length = 132
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 51 HADE-LDLKAGYKVTVIDTSDPDWWKGK-CLGKIGYFPSKY 89
H DE L K G +TVI + +WWK + G+ G P Y
Sbjct: 48 HDDEDLPFKKGDILTVISKEEDNWWKARDSAGREGMIPKPY 88
>SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 526
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 41 YVILYNFKSRHADELDLKAGYKVTVI--DTSDPDWWKGK-CLGKIGYFPSKYCTKLQAG 96
Y I+ + KSR +L K G +V VI DT DP+W++ + G IG P Y L+ G
Sbjct: 140 YQIMAHQKSR---DLPFKKG-EVLVIERDTRDPNWYRARNKTGVIGLIPVNYVQVLERG 194
>SB_10886| Best HMM Match : SH3_1 (HMM E-Value=2.8e-19)
Length = 152
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 54 ELDLKAGYKVTVIDTSDPDWWKGKCLGKIGYFPSKY 89
EL K G + V D +W +G+ G+IG FP+ Y
Sbjct: 2 ELSFKKGDYIIVKRQIDRNWIEGEVNGRIGIFPTNY 37
>SB_8979| Best HMM Match : SH3_1 (HMM E-Value=3.6e-05)
Length = 169
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 32 HQRLLPTNLYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKG 76
H + + +Y + ++ DEL L+ G +V V++ D W+ G
Sbjct: 50 HMSFMEGERFKAMYGYSPQNEDELPLEEGEEVFVLEKCDDGWFVG 94
>SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)
Length = 409
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 39 NLYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGKCLGKIGY 84
++Y ++ K+ DEL+ G + + + ++ DWW G GY
Sbjct: 348 SIYQAKWDVKADDEDELEFSRGDLIYIYEKANSDWWVGSKYKPQGY 393
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 44 LYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGK--CLGKIGYFPSKYCTKLQ 94
++N+ + DEL L G + V+ W+ G+ C G G+FP+ + ++
Sbjct: 939 IHNYTPQQPDELALHEGDVINVLRKLPDGWYHGERLCDGVQGWFPANHTENIR 991
>SB_8922| Best HMM Match : SH3_1 (HMM E-Value=0.19)
Length = 40
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 41 YVILYNFKSRHADELDLKAGYKVTVIDTSDPDWW 74
Y+ + ++++ DELDL+ G V ++ WW
Sbjct: 4 YIATHEYRAQEEDELDLEKGTVVELLTEYQDGWW 37
>SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10)
Length = 637
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 67 DTSDPDWWKGKCLGKIG 83
DT+ PDW K KC+ KIG
Sbjct: 613 DTAKPDWCKKKCVKKIG 629
>SB_38378| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 478
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 40 LYVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGK 77
+ V +Y F+S +L L G VI+ S WW K
Sbjct: 16 IVVAMYEFQSTEPGDLSLIKGELFAVIEKSGEHWWLAK 53
>SB_39254| Best HMM Match : GRP (HMM E-Value=3.3)
Length = 88
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 193 YNNG--SSPTYVRSGYDKYDSYIGNDSTGLDEDGHRVYADG 231
Y NG S TY R+GY+ +Y N + D H Y +G
Sbjct: 43 YRNGYNDSHTYYRNGYNGSHTYYRNGLLIVRHDSHTCYGNG 83
>SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9)
Length = 483
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 185 WSERNWSKYNNGSSPTYVRSGYDKYDSY 212
WS NWS YNN S + S Y+ + +Y
Sbjct: 42 WSHNNWSTYNNWSHNNW--STYNNWSTY 67
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 183 STWSERNWSKYNNGSSPTYVR-SGYDKYDSY 212
+ WS NWS YNN S TY S Y+ + +Y
Sbjct: 51 NNWSHNNWSTYNNWS--TYNNWSTYNNWSTY 79
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 55 LDLKAGYKVTVIDTSDPDWWKGKC-LGK---IGYFPS 87
L K G + +I+ ++ WKGK +GK IGYFP+
Sbjct: 289 LSFKTGDVIEIIEQNESGRWKGKIFVGKKETIGYFPA 325
>SB_4546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 43 ILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKGK 77
++ F++ A +LDL G +VT++ T P++ K +
Sbjct: 28 VVTTFRANAASDLDLTVGDEVTILKTGVPEYRKAQ 62
>SB_34642| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14)
Length = 237
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 41 YVILYNFKSRHADELDLKAGYKVTVIDTSDPDWWKG--KCLGKIGYFPSKY 89
Y+++Y++ + DE+ + G + + D W G K G+ G P+ Y
Sbjct: 182 YLVMYDYNAADDDEVSMVEGDIIVDAEIIDEGWMVGRVKRTGQSGMLPANY 232
>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
Length = 289
Score = 28.7 bits (61), Expect = 6.0
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 234 WWQRPLGVRRDHCQRCG 250
W ++ +GVR+ HC++CG
Sbjct: 190 WSKKTVGVRQHHCRKCG 206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.135 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,116,190
Number of Sequences: 59808
Number of extensions: 440331
Number of successful extensions: 943
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 855
Number of HSP's gapped (non-prelim): 92
length of query: 294
length of database: 16,821,457
effective HSP length: 82
effective length of query: 212
effective length of database: 11,917,201
effective search space: 2526446612
effective search space used: 2526446612
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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