GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000405-TA|BGIBMGA000405-PA|undefined
         (183 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q176R8 Cluster: Putative uncharacterized protein; n=1; ...    53   5e-06
UniRef50_Q1EC92 Cluster: IP12350p; n=8; Sophophora|Rep: IP12350p...    48   1e-04
UniRef50_Q2SER6 Cluster: Uncharacterized protein with SCP/PR1 do...    32   6.9  
UniRef50_Q9K5U9 Cluster: BH3989 protein; n=2; Bacillus haloduran...    32   9.2  

>UniRef50_Q176R8 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 224

 Score = 52.8 bits (121), Expect = 5e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 4/47 (8%)

Query: 1   MNVHTDCMPQVGKCQTKSRLLRRQKSTSEIESHRVQETAFEDERAGD 47
           +NVH DC  Q+ KCQ K +LLRRQKSTSEIE+     T  E+E+  D
Sbjct: 89  VNVHADCASQLPKCQVKQKLLRRQKSTSEIEN----RTEVEEEKPTD 131


>UniRef50_Q1EC92 Cluster: IP12350p; n=8; Sophophora|Rep: IP12350p -
           Drosophila melanogaster (Fruit fly)
          Length = 818

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 19/32 (59%), Positives = 25/32 (78%)

Query: 1   MNVHTDCMPQVGKCQTKSRLLRRQKSTSEIES 32
           +N H DC P + +CQ K +LLRRQKSTSE+E+
Sbjct: 743 LNAHGDCAPNLPRCQPKQKLLRRQKSTSELEN 774


>UniRef50_Q2SER6 Cluster: Uncharacterized protein with SCP/PR1
          domains; n=1; Hahella chejuensis KCTC 2396|Rep:
          Uncharacterized protein with SCP/PR1 domains - Hahella
          chejuensis (strain KCTC 2396)
          Length = 143

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 14 CQTKSRLLRRQKSTSEIESHR--VQETAFEDERAGDGWLPGQRLTKISFKKS 63
          CQ  S LL  ++     E H   + +  F D   GDGW  G+R T+  ++ S
Sbjct: 27 CQIASPLLWNERLALAAEEHSWDMAQNGFFDHIGGDGWPVGERATRNGYRWS 78


>UniRef50_Q9K5U9 Cluster: BH3989 protein; n=2; Bacillus
           halodurans|Rep: BH3989 protein - Bacillus halodurans
          Length = 533

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 11/25 (44%), Positives = 20/25 (80%)

Query: 87  LIEFRYSEEEVDQTYQVLKRANEIS 111
           LI+++++EE +D+ Y +L  ANE+S
Sbjct: 407 LIDYKFNEEYIDKMYTILAEANELS 431


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.130    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,416,150
Number of Sequences: 1657284
Number of extensions: 3867819
Number of successful extensions: 9140
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9136
Number of HSP's gapped (non-prelim): 5
length of query: 183
length of database: 575,637,011
effective HSP length: 96
effective length of query: 87
effective length of database: 416,537,747
effective search space: 36238783989
effective search space used: 36238783989
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 69 (31.9 bits)