Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000404-TA|BGIBMGA000404-PA|undefined
(470 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60030.1 68418.m07527 expressed protein 39 0.006
At2g30130.1 68415.m03667 LOB domain protein 12 / lateral organ b... 36 0.058
At3g29075.1 68416.m03637 glycine-rich protein 35 0.10
At5g57960.1 68418.m07252 GTP-binding family protein similar to S... 33 0.31
At3g28770.1 68416.m03591 expressed protein 33 0.54
At4g07990.1 68417.m01280 DNAJ heat shock N-terminal domain-conta... 32 0.71
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 32 0.94
At5g50840.2 68418.m06299 expressed protein 31 2.2
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 31 2.2
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 31 2.2
At5g02650.1 68418.m00201 expressed protein 30 2.9
At3g57910.1 68416.m06455 D111/G-patch domain-containing protein ... 30 2.9
At5g15070.1 68418.m01766 expressed protein 30 3.8
At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7... 29 5.0
At2g27070.1 68415.m03252 two-component responsive regulator fami... 29 5.0
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 29 5.0
At1g09770.1 68414.m01096 myb family transcription factor contain... 29 5.0
At2g45460.1 68415.m05654 forkhead-associated domain-containing p... 29 6.6
At5g55600.1 68418.m06932 agenet domain-containing protein / brom... 29 8.8
At4g39620.1 68417.m05600 pentatricopeptide (PPR) repeat-containi... 29 8.8
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P... 29 8.8
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 29 8.8
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 29 8.8
At2g11570.1 68415.m01245 hypothetical protein 29 8.8
At1g19990.1 68414.m02504 expressed protein ; expression supporte... 29 8.8
At1g13030.1 68414.m01511 sphere organelles protein-related conta... 29 8.8
At1g10340.2 68414.m01165 ankyrin repeat family protein contains ... 29 8.8
At1g10340.1 68414.m01164 ankyrin repeat family protein contains ... 29 8.8
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 29 8.8
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 39.1 bits (87), Expect = 0.006
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 223 KKMNKKNGYQSDDDNIRYKLNTQYFNNNLKSPNKHKKEKQNFFDDDEVRYKFPTVL-NRT 281
KKM K D+ + KL + + + K KK+K+N D+D V K L +
Sbjct: 118 KKMKKSKDADVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLEDEQ 177
Query: 282 KPAENKPKPKQKIKVN 297
K A+ K + K+K K N
Sbjct: 178 KSADRKERKKKKSKKN 193
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 223 KKMNKKNGYQSDDDNIRYKLNTQYFNNNLKSPNKHKKEKQNFFDDDE-VRYKFPTVLNRT 281
KK KK D+D + K+ + + + K +K+K++ ++DE V + + +
Sbjct: 150 KKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQ 209
Query: 282 KPAENKPKPKQK 293
K AE K K K K
Sbjct: 210 KSAEIKEKKKNK 221
>At2g30130.1 68415.m03667 LOB domain protein 12 / lateral organ
boundaries domain protein 12 (LBD12) identical to
SP|Q8LBW3 LOB domain protein 12 {Arabidopsis thaliana}
Length = 193
Score = 35.9 bits (79), Expect = 0.058
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 154 DGLDSLARHQNRGLENSVYSKVNEI---QEDMSIKKYEYRATQLHLAAVRAQGHVEIQLN 210
D ++SL N + + VY V I Q +S + + Q + ++ Q +Q +
Sbjct: 63 DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSH 122
Query: 211 RSILLIVIDAVAKKMNKKN----GYQSDDDNIRYKLNTQYFNNNLKSPN 255
+L + D A +N N ++++N Y +++ FN+N SP+
Sbjct: 123 HQVLELDQDHKALLLNNNNINNCNTNNNNNNFGYAMSSGQFNSNFASPS 171
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 35.1 bits (77), Expect = 0.10
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 223 KKMNKKNGYQSDDDNIRYKLNTQYFNNNLKSP--NKHKKEKQNFFDDDEVR----YKFPT 276
KK KK+G S+DD + K + + + ++ KK+K+++ DDDE + Y
Sbjct: 169 KKDKKKDGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYNDDDEKKKKKHYNDDD 228
Query: 277 VLNRTKPAENKPKPKQKIKVNFWSNKQTSNRLH--NVDPKSKTNRRH 321
+ K N ++K K + ++ + H N D + K + H
Sbjct: 229 DEKKKKHNYNDDDDEKKKKKEYHDDEDKKKKKHYDNDDDEKKKKKDH 275
>At5g57960.1 68418.m07252 GTP-binding family protein similar to
SP|P25519 GTP-binding protein hflX {Escherichia coli}
Length = 540
Score = 33.5 bits (73), Expect = 0.31
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 113 MPPVLREEMLLDRMAGGQAR-LSYEQLRKDAQDLETQIKLLQDGLDSLARHQNR 165
+P + R L+R +GGQ + + +Q+ D + L TQI +L+ L+S+ +H+ +
Sbjct: 246 LPRLTRMWTHLERQSGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRKQ 299
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 32.7 bits (71), Expect = 0.54
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 387 GTKVSKRKSLNSENQMSTKHKKKQDSEPRIQGNETELEFFSKYVVQKLRKMETNQR 442
G K + ++N+ ++ K KKK+ E + + + E +YV +L+K E N++
Sbjct: 924 GNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKK 979
>At4g07990.1 68417.m01280 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI5 DnaJ
homolog subfamily B member 10 Mus musculus ; contains
Pfam profile PF00226 DnaJ domain
Length = 347
Score = 32.3 bits (70), Expect = 0.71
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 385 NNGTKVSK-RKSLNSENQMSTKHKKKQDSEPRIQGNETELEFFSKYVVQKLRKMETNQRI 443
N G +S K+ NSEN S+ +++ + RI+ E E + ++ K+ K E Q
Sbjct: 32 NKGPTISHLSKTKNSENCSSSVRRRENVFQRRIEAVEEEKKKSKSNLIFKVVKKEEKQSK 91
Query: 444 YSENLINTVLML 455
+S++++ T +L
Sbjct: 92 FSDDVVTTPKIL 103
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 31.9 bits (69), Expect = 0.94
Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 141 DAQDLETQIKLLQDGLDSLARHQNRGL-----ENSVY-SKVNEIQEDMSIKKYEYRATQL 194
D Q LET +K L + + LA H L E +++ SK + E + K Y+ Q+
Sbjct: 979 DQQQLETNVKQLLEEKEELAMHLANSLLEMEEEKAIWSSKEKALTEAVEEKIRLYKNIQI 1038
Query: 195 H-LAAVRAQGHVEIQLNRSILLIVIDAVAKKMNKKNGYQSDDDNIRYKLNTQYFNNNLKS 253
L+ ++ E++ R + + D + + +++N Q + ++ L + L+S
Sbjct: 1039 ESLSKEMSEEKKELESCRLECVTLADRL--RCSEENAKQDKESSLEKSLEIDRLGDELRS 1096
Query: 254 PNKHKKEKQNFFDDD 268
+ K+ Q D
Sbjct: 1097 ADAVSKQSQEVLKSD 1111
>At5g50840.2 68418.m06299 expressed protein
Length = 405
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 362 DLTIQLNEEEAND-LGEDLNQAFVNNGTKVSKRKSLNSENQMSTKHKKKQDSEPRIQGNE 420
+L + E+EA+ + + L++ N T + SL + Q K++ S+ + +
Sbjct: 80 ELEFEQKEKEASPPISQTLSEGSTQNSTLSKEMDSLKPKKQQEVVESKRKGSKNMFKSEK 139
Query: 421 TELEFFSKY 429
LEF KY
Sbjct: 140 EFLEFMLKY 148
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 115 PVLREEMLLDRMAGGQARLSYEQLRKDAQDLETQIKLLQDGLDSLARHQNRGLENSVYSK 174
PV RE + + + L D L + + ++ DG+ + HQ R L+N++YS+
Sbjct: 768 PVAREGRISSSLQEPFSGLMQGSPLADDSSLHSDVGIIHDGVSNGVVHQPRPLDNAIYSQ 827
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 30.7 bits (66), Expect = 2.2
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 115 PVLREEMLLDRMAGGQARLSYEQLRKDAQDLETQIKLLQDGLDSLARHQNRGLENSVYSK 174
PV RE + G + L D+ L + ++ D + + A HQ R L+N+VYS+
Sbjct: 777 PVARESRISSSPLGSSGLMQGSPLSDDSS-LHSDSGMMHDSVSNGAVHQPRLLDNAVYSQ 835
>At5g02650.1 68418.m00201 expressed protein
Length = 171
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 6 YEYRATQLHLAAVRAQEL-EEILTEVTTAVSDAICQGGEIITEKCNTQLR 54
Y+ + QLH+ + L ++ T ++ VS C G++ + C ++LR
Sbjct: 106 YQDSSGQLHVPTETGEALLRKLETTISDIVSGCFCNVGQVFVDSCRSELR 155
>At3g57910.1 68416.m06455 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 265
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 252 KSPNKHKKEKQNFFDDDEVRYKFPTVLNRTKPAENKPKPKQKIKVNFWSNKQTSNRLHNV 311
+ P+K KK+K+ ++E R K +L + K+++ +NF K ++L NV
Sbjct: 137 EDPHKEKKKKEEIEAENEKR-KVDEMLEDFGSRQKSQWRKKRVLINFRKAKAALDQLENV 195
Query: 312 D-PKSKTNRRHTVGAPN 327
+ K N G P+
Sbjct: 196 EVVPEKKNEEDEDGKPD 212
>At5g15070.1 68418.m01766 expressed protein
Length = 1049
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/95 (18%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 176 NEIQEDMSIKKYEYRATQLHLAAVRAQGHVEIQLNRSILLIVIDAVAKKMNKKNGYQSDD 235
N +E MS+ + + Q+ ++ ++ E + ++ L + D + + +N + DD
Sbjct: 795 NTREEAMSVAELKNSQDQVSVSLYSSRK--EDRYSQPKLFVKSDELRRPSTGENKEEDDD 852
Query: 236 DNIRYKLNTQYFNNNLKSPNKHKKEKQNFFDDDEV 270
+Y+L+ +Y N+ +P +H + + F + +
Sbjct: 853 KETKYRLDPKY--ANVMTPERHVRTRLYFTSESHI 885
>At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7) /
HD-ZIP protein 7 / HD-ZIP protein (HB-3) identical to
homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)
(HD-ZIP protein ATHB-3) (SP:Q00466) [Arabidopsis
thaliana]
Length = 314
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 130 QARLSYEQLRKDAQDLETQIKLLQDGLDSLARHQNRGLENSVYSKVNEIQEDMSIKK 186
+AR +QL +D L+ Q +L+ DSL H + V K ++ +E IK+
Sbjct: 164 RARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKIKR 220
>At2g27070.1 68415.m03252 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 575
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 196 LAAVRAQGHVEIQLNRSILLIVIDAVAKKMNKKNGYQSDDDNIRYKLNTQYFNNNLKSPN 255
L+ + Q + + + I+L+ A K KKN D N + + N N
Sbjct: 144 LSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTNVSHVSTNGSRKN 203
Query: 256 KHKKEKQNFFDDDE 269
+ +K K DD E
Sbjct: 204 RKRKPKGGPSDDGE 217
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 229 NGYQSDDDNIRYKLN-TQYFNNNLKSPNKHKKEKQNFFDDDEVRYKFPTVLNRTKPAENK 287
N + +++N +Y N + FNNN N K+E N +++ YK+ + EN
Sbjct: 148 NNEEFNNNNNKYDANFKEEFNNNKYDENYAKEEFNNNNNNNNYNYKYDENVKEESFPENN 207
Query: 288 PKPKQKI 294
K+ +
Sbjct: 208 EDNKKNV 214
>At1g09770.1 68414.m01096 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 844
Score = 29.5 bits (63), Expect = 5.0
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 379 LNQAFVNNGTKVSKRKSLNSENQMSTKHKKKQDSEPRIQGNETELEFFSKY 429
L QA + GT+V K+L + +M+ +KK E I+ ETE + ++Y
Sbjct: 740 LKQAEIG-GTEVECFKALKRQEEMAASFRKKNLQEEVIKQKETESKLQTRY 789
>At2g45460.1 68415.m05654 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 915
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/66 (21%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 130 QARLSYEQLRKDAQDLETQIKLLQDGLDS--LARHQNRGLENSVYSKVNEIQEDMSIKKY 187
+ +L++ +K ++L+ Q+K LQ LDS AR + +++ +++ D+ +++
Sbjct: 457 EEQLAFADAQKKLEELDLQVKRLQKDLDSEKAAREEAWAKVSALELEISAAVRDLDVERQ 516
Query: 188 EYRATQ 193
+R +
Sbjct: 517 RHRGAR 522
>At5g55600.1 68418.m06932 agenet domain-containing protein /
bromo-adjacent homology (BAH) domain-containing protein
contains Pfam profile PF01426: BAH domain and PF05641:
Agenet domain
Length = 663
Score = 28.7 bits (61), Expect = 8.8
Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Query: 290 PKQKIKVNFWSNKQTSNRLHNVDPKSKTNRRHTVGAPNLXXXXXXXXXXXXXXFLPSPIF 349
PK +I S+ + ++L + SK + PN+ L
Sbjct: 532 PKPEILAIVSSDSSSESKLSMLSTLSKDTKAKPSAMPNIVEEAEPEGEKAYNSLLGEQ-- 589
Query: 350 SENHIPMVTVPDDLTIQLNEEEANDLGEDLNQAFVNNGTKVSKRKSLNSENQMSTKHKKK 409
++ H +V DD +L++EE ++G + + +VN+ V K E+ ++ +K
Sbjct: 590 NKEHKDVVVKEDDEN-KLSKEEDKEVGSNETKTYVNHENTVEDHK----EDDVTLNDEKA 644
Query: 410 QDSE 413
+ SE
Sbjct: 645 RKSE 648
>At4g39620.1 68417.m05600 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 563
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 391 SKRKSLNSENQMSTKHKKKQDSEPRIQGNETELEFFSKYVVQKLRKMETNQRIYSENL 448
S+ SEN+ ST+ + +DS P+ +G EF K R ++ ++ Y ENL
Sbjct: 465 SRLPGSGSENRKSTRSSRSRDS-PKGRGGNQLTEFQDKDNKHVFRAVQDCRKNYLENL 521
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
SP:P25819, GI:17865693 from [Arabidopsis thaliana]
Length = 492
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 236 DNIRYKLNTQYFNNNLKSP-----NKHKKEKQNFFD-DDEVRYKFPTVLNRTKPAENKPK 289
D R++L Y + +P N H + NF D+EV Y FP+ ++ + AE P
Sbjct: 350 DTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNY-FPSRYDQVRHAEKYPT 408
Query: 290 P 290
P
Sbjct: 409 P 409
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 127 AGGQARLSYEQLRKDAQDLETQIKLLQDGLDSLARHQNRGLENSVYSKVNEIQEDMSIKK 186
A +A++ +KD D++ Q+KL+ GLD + + + ++ +++NE+ E + K
Sbjct: 224 AAMRAKIKESMGQKD--DIQGQVKLMGAGLDGVKKER-----QAISARINELSEKLKATK 276
Query: 187 YEYRATQLHLAAV 199
E + L V
Sbjct: 277 DEITVLENELKTV 289
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 28.7 bits (61), Expect = 8.8
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 165 RGLENSVYSKVNEIQEDMSIKKYEYRATQLHLAAVRAQ---GHVEI--QLNRSILLIVID 219
+ L+N VNEIQED + KK + T + + GH I +L R + D
Sbjct: 249 KNLDNGKEFVVNEIQEDGTWKKVKEVGTGTQMTMEEFEMCVGHSPIVQELMRRQNVEDSD 308
Query: 220 AVAKKMNKKNGYQSDDDNIRYKLNTQYF---NNNLKSPNKHKKEKQNFFDDD 268
K N+ +G + D+ + K +F + S H KE+++ D D
Sbjct: 309 KNTSKENEDSGNSNKDNASKSKKKGSWFKSIKSVASSMTGHSKERRSSDDRD 360
>At2g11570.1 68415.m01245 hypothetical protein
Length = 305
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 35 SDAICQGGEIITEKCNTQLRRYESLCAQARAVSSTADLAHLA 76
SD + G E++ K N +++ Y LC VS + A
Sbjct: 242 SDEMACGDEVVGRKRNMRMKNYNKLCGATEKVSEAINSCQFA 283
>At1g19990.1 68414.m02504 expressed protein ; expression supported
by MPSS
Length = 251
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/65 (27%), Positives = 27/65 (41%)
Query: 223 KKMNKKNGYQSDDDNIRYKLNTQYFNNNLKSPNKHKKEKQNFFDDDEVRYKFPTVLNRTK 282
K M K + D+ ++ + N N K KKE+ + DDD K +R K
Sbjct: 8 KAMKMKEEAEEDNKSLSSFAKKKPTNGNNAGSKKLKKEENDDDDDDNKPIKSSVSGSRAK 67
Query: 283 PAENK 287
P + K
Sbjct: 68 PVKKK 72
>At1g13030.1 68414.m01511 sphere organelles protein-related contains
weak similarity to Swiss-Prot:Q09003 sphere organelles
protein SPH-1 (Sphere protein 1) [Xenopus laevis]
Length = 608
Score = 28.7 bits (61), Expect = 8.8
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 368 NEEEANDLGEDLNQAFVNNGTKVSKRKSLNSENQMSTKHKKKQDSEPRIQGNETELEFFS 427
+E E ++L E+ + FV K SK++ +S+NQ STK KK + +E E
Sbjct: 141 SESEEDELEEEAEE-FVPE-KKASKKRKTSSKNQ-STKRKKCKLDTTEESPDERENTAVV 197
Query: 428 KYVVQKLRKMET 439
VV+K +K ++
Sbjct: 198 SNVVKKKKKKKS 209
>At1g10340.2 68414.m01165 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 574
Score = 28.7 bits (61), Expect = 8.8
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 144 DLETQIKLLQDGLDSLA-RHQNRGLENSVY------------SKVNEIQEDMSIKKYEYR 190
DL ++L++D SL R++ L N+V SK+ E++ + + YR
Sbjct: 12 DLPAFLELVEDSESSLEERNEEEHLNNTVLHMAAKFGHRELVSKIIELRPSLVSSRNAYR 71
Query: 191 ATQLHLAAVRAQGHVEIQL 209
T LHLAA+ ++ +Q+
Sbjct: 72 NTPLHLAAILGDVNIVMQM 90
>At1g10340.1 68414.m01164 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 578
Score = 28.7 bits (61), Expect = 8.8
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 144 DLETQIKLLQDGLDSLA-RHQNRGLENSVY------------SKVNEIQEDMSIKKYEYR 190
DL ++L++D SL R++ L N+V SK+ E++ + + YR
Sbjct: 12 DLPAFLELVEDSESSLEERNEEEHLNNTVLHMAAKFGHRELVSKIIELRPSLVSSRNAYR 71
Query: 191 ATQLHLAAVRAQGHVEIQL 209
T LHLAA+ ++ +Q+
Sbjct: 72 NTPLHLAAILGDVNIVMQM 90
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 230 GYQSDDDNIRYKLNTQYFNNNLKSPNKHKKEKQNFFDDDEVRYK 273
GYQSD D R K +Y +++ +S K ++Q+ + D +K
Sbjct: 678 GYQSDKDRDRSKQRQRYKSDDPESDQSRKGKRQSEENSDRETHK 721
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.128 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,118,241
Number of Sequences: 28952
Number of extensions: 414162
Number of successful extensions: 1323
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1293
Number of HSP's gapped (non-prelim): 42
length of query: 470
length of database: 12,070,560
effective HSP length: 84
effective length of query: 386
effective length of database: 9,638,592
effective search space: 3720496512
effective search space used: 3720496512
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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