Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000404-TA|BGIBMGA000404-PA|undefined
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0710 - 26492093-26493460 32 0.85
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 32 1.1
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 32 1.1
01_06_1261 - 35826513-35828941,35829201-35829294 32 1.1
01_01_0473 - 3478660-3480338,3480507-3480609 32 1.1
12_02_0831 + 23529021-23529162,23529383-23529435,23529727-235310... 31 1.5
08_02_1372 + 26500093-26500154,26500733-26500933,26501858-265019... 31 2.0
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 31 2.6
10_08_0928 + 21617977-21618157,21618260-21618378,21618653-216187... 30 4.6
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 30 4.6
04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562... 30 4.6
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049... 30 4.6
12_02_0652 - 21527768-21528328,21528980-21529738,21530151-215302... 29 8.0
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 29 8.0
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 29 8.0
>11_06_0710 - 26492093-26493460
Length = 455
Score = 32.3 bits (70), Expect = 0.85
Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 11/146 (7%)
Query: 219 DAVAKKMNKKNGYQSDDDNIRYKLNTQYFNNNLKSPNKHKKEKQNFFDDDE---VRYKFP 275
D A+K +KK SDDD K + + N + KK K+ D+D + K
Sbjct: 153 DDDAEKKSKKKSKNSDDDEDDKKKSKKKPKNPDDDEDDKKKSKKKSSDEDNDGAKKKKKK 212
Query: 276 TVLNRTKPAENKPKPKQKIKVNFWSNKQTSNRLHNVDPKSKTNRRHTVGAPNLXXXXXXX 335
++ E+ KPK+K K +K S+ D K + P
Sbjct: 213 KSKGKSSDEEDDEKPKKKSK-----SKSKSSSSDEEDEKKSKSEGQAAAKPKEEDEEGGS 267
Query: 336 XXXXXXXFLPSPIFSENHIPMVTVPD 361
P +E+H +++PD
Sbjct: 268 ASASASTSAPK---NEHHSGTMSLPD 290
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 123 LDRMAGGQAR-LSYEQLRKDAQDLETQIKLLQDGLDSLARHQ 163
L+R +GGQ + + +Q+ D + L TQI L+ L+S+ +H+
Sbjct: 200 LERQSGGQVKGMGEKQIEVDKRILRTQISALRKELESVRKHR 241
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 371 EANDLGEDLNQAFVNNGTKVSKRKSLNSENQMSTKHKKKQDSEPRIQGNETELEFFSKYV 430
E N + + Q +K+ +++ L E ++ K+K+ SE I + E+E +
Sbjct: 266 EENQMAINRLQIIKEEKSKIEEKRKLG-EQDVARLMKEKEISENTIASLKKEMEVMTSMH 324
Query: 431 VQKLRKMETNQRIYSENLINTVLMLGQLGKLNGKSKIAEV 470
Q+L+K+E + E+L + + L + KI EV
Sbjct: 325 EQQLQKIELTAKQMEEHLTTKIKEVESL-LVQSNKKIEEV 363
>01_06_1261 - 35826513-35828941,35829201-35829294
Length = 840
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 348 IFSENHIPMVTVPDDLTIQLNEEEANDLGEDLNQAFVNNGTKVSKRKSLNSENQMSTKHK 407
+ NH P+ + + L ++ + + + +N GT + +++ + S K
Sbjct: 90 LHKSNHTIATAFPEQVQLSLQDDNGDGFPKGITGININRGTSAAPKRTQTHKKISSKMSK 149
Query: 408 -KKQDSEPRIQGN----ETELEFFSKYVVQKLRKMETNQRIYSE 446
K Q+ R+Q +TE EFF L K + +R +E
Sbjct: 150 DKAQEEIERLQKKILVLQTEKEFFKSSYESSLNKYLSIERQAAE 193
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 133 LSYEQLRKDAQDLETQIKLLQDGLDSLARHQNRGLE--NSVYSKVNEIQEDMSIKKYEYR 190
+ +EQ+RK+ + T++ LQ +++L R LE + + S++N+++ ++ E+
Sbjct: 350 IEFEQVRKELEGSRTEVAELQATINNLKADLGRALEEKSQLESRINDLEHTIACNLEEFS 409
Query: 191 ATQLHLAA 198
+ L A
Sbjct: 410 QEKSSLGA 417
>12_02_0831 +
23529021-23529162,23529383-23529435,23529727-23531074,
23531154-23531324,23531672-23532531
Length = 857
Score = 31.5 bits (68), Expect = 1.5
Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 4/110 (3%)
Query: 248 NNNLKSPNKHKKEKQNFFDDDEVRYKFPTVLNRTKPAENKPK----PKQKIKVNFWSNKQ 303
N L+ P K N + +R K P NR++ E+ PK PK K+ W
Sbjct: 25 NQRLQMPKAIAYRKHNEGSSNTLRVKVPKPKNRSENDESVPKGTNSPKAKVGTFIWRTLM 84
Query: 304 TSNRLHNVDPKSKTNRRHTVGAPNLXXXXXXXXXXXXXXFLPSPIFSENH 353
+ D K + ++ + L +P + S+ H
Sbjct: 85 FKKKTLKKDQKKSDSPANSPSSSRLTRSRSIHHSKCFEYVVPDELASQYH 134
>08_02_1372 +
26500093-26500154,26500733-26500933,26501858-26501936,
26502652-26502752,26503417-26503516,26503893-26503934,
26504026-26504067,26504352-26504509,26504708-26504780
Length = 285
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 356 MVTVPDDLTIQLNEEEANDLGEDLNQAFVNNGTKVSKRKSLNSENQMSTKHKKKQDSEPR 415
+V + DD+T +L E N LGEDL+ + + K+ + ++ +T+ K D
Sbjct: 132 LVKIRDDVTEKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 191
Query: 416 IQGNETELEFFSKYVVQKLRK 436
+Q E + ++ + +KL +
Sbjct: 192 LQRKEQMVSEANRCLRRKLEE 212
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 30.7 bits (66), Expect = 2.6
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 117 LREEMLLDRMAGGQARLSYEQL-RKDAQDLETQIKLLQDGLDSLARHQNRGLENSVYSKV 175
L+E+ L+D + RL E+L +++ DL+ ++L + L+ + E + K
Sbjct: 567 LKEKSLIDNI--DHQRLENEELLKRERADLQRNLQLHRHELEMEMEKKQASKERELEEKE 624
Query: 176 NEIQEDMSIKKYEY-RATQLHLAAVRAQGHVEIQLNRSILLIVIDAVAKKMNKKNGYQSD 234
NE+ M + E RA +L+ + ++ + QL + ++V D K K + D
Sbjct: 625 NELNRKMDFVENELKRAAELNESKIQKILLEKKQLQKEKEVLVEDR-QKLETDKADIRRD 683
Query: 235 DDNIRYKLNTQYFNNNLKSPNK-HKKEKQNFFDDDEVRYK 273
D+ LNT + +LK + + +++ N D E +YK
Sbjct: 684 IDS----LNT--LSKSLKERREAYNRDRNNLIDIFE-KYK 716
>10_08_0928 +
21617977-21618157,21618260-21618378,21618653-21618774,
21618853-21619049,21619350-21619603,21619779-21619880,
21619976-21620404,21620611-21621369,21621586-21621771
Length = 782
Score = 29.9 bits (64), Expect = 4.6
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 117 LREEMLLDRMAGGQARLSYEQLRKDAQDLETQIKLLQDGLDSLARH---------QNRGL 167
L+E ML + M + L E+LR + + ++ KL+QD + ++H +
Sbjct: 282 LQELMLSEDMDDVNSEL--EKLRLELRHIKGVCKLVQDESINASQHVTDLAAKRAEEEAR 339
Query: 168 ENSVYSKVNEIQEDMSIKKYEYRATQLHLAAVRAQGHVEIQLNRSILLIVIDAVAKKMNK 227
+ VYS++N + E +K + A + VR E L + IL + A KM +
Sbjct: 340 LSEVYSRINRVNEQAHQEKEQLNALEAQCRHVRDLARKE-ALQKQILQLRTSKEADKMQR 398
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 29.9 bits (64), Expect = 4.6
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 117 LREEMLLDRMAGGQARLSYEQLRKDAQDLETQIKLLQDGLDSLARHQNRGLENSVYSKVN 176
L+ E+ + R A + + L+K+ +DL + +L++ LD L QN+ + + + N
Sbjct: 1413 LKSELSIIRGANSEYQQKIHSLQKENEDLTRRNQLMEKELD-LKTSQNK--DENTNKQGN 1469
Query: 177 EIQE--DMSIKKYEYRATQLHLAAVR-AQGHVEIQLNRSILLIVIDAVAKKMNKKNGYQS 233
+ E D + + +++ L R A+ E +L R L + K K+G ++
Sbjct: 1470 DANENGDSPVNEVPELQSKIQLLETRLAEALEENKLYRGQLKSPMP--EGKSASKDGKEN 1527
Query: 234 DDDNI 238
DDD I
Sbjct: 1528 DDDKI 1532
>04_03_0659 -
18453778-18453903,18453976-18454963,18455496-18456229,
18456292-18456360,18456528-18456605,18456703-18456789,
18456881-18456931,18457021-18457092,18457177-18457304,
18458194-18458275,18458705-18458754,18459043-18459096,
18459586-18459675,18459903-18459983,18460443-18460538,
18460960-18461022,18461313-18461402,18461630-18461698,
18462051-18462291
Length = 1082
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 387 GTKVSKRKSLNSENQMSTKHKKKQDSEPRIQGNETELEFFSKYVVQKLRKMETNQRIYSE 446
GTK + K L E S K K + + ++ N E F KY + +RK +E
Sbjct: 53 GTK-GQSKELQKEESKSRKSTKDKSKKNKVPANAEE--FHKKYTTKVIRKESRTDSSSTE 109
Query: 447 NLINT 451
+I T
Sbjct: 110 QVIGT 114
>03_04_0020 -
16504322-16504654,16504758-16504785,16504937-16504989,
16505377-16505463,16505636-16505704,16506071-16506145,
16507040-16507210,16507693-16507793,16508062-16508139,
16508492-16508648,16508737-16509006,16509369-16509485,
16510250-16510339,16510417-16510629,16510742-16510891,
16511929-16512342
Length = 801
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 258 KKEKQNFFDDDEVRYKFPTVLNRTKPAENKPKPKQKIKVNFWSNKQTSNRLHNV 311
+K +Q F + V Y F + NRT K K KQK K N N+Q++ L+ +
Sbjct: 660 EKIEQVFVTEGGVLYMFFSYGNRTLDETLKLKGKQKPKKNSTQNEQSATSLNGL 713
>12_02_0652 -
21527768-21528328,21528980-21529738,21530151-21530216,
21530550-21530598,21530717-21530817,21531469-21531540,
21531630-21531746,21531870-21531959,21532224-21532319,
21532429-21532482,21533210-21533290,21533382-21533581,
21533677-21533804,21533943-21533995,21534312-21534374
Length = 829
Score = 29.1 bits (62), Expect = 8.0
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 377 EDLNQAFVNNGTKVSKRKSLNSENQMSTKHKKKQDSEPRIQGNETEL--EFFSKYVVQKL 434
++L + F ++ + RK L+ + S ++ + E +G++ + E F + V L
Sbjct: 528 DELRKRFAHSSSGQQNRKQLSRSSANSMSDFQEIEEEEINKGDQHPVLSEIFDSHFVSFL 587
Query: 435 RKMETNQR-----IYSENLINTVLMLGQLGKLNGK 464
K+ET+ R I+S T ++ +L + NG+
Sbjct: 588 SKLETDIRDNIMDIFSRTKTATAIIPAELEQKNGE 622
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 29.1 bits (62), Expect = 8.0
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 143 QDLETQIKLLQDGLDSLARHQNRGLE--NSVYSKVNE-------IQEDMSIKKYEYRATQ 193
QD + +I LL L S+ LE N++ S NE +Q ++ K+EY +
Sbjct: 808 QDRDAEIALLNKELASIKDQVQTYLEEINTLKSSKNEKEEMIEKLQSEIRSLKFEYDNLK 867
Query: 194 LHLAAVRAQGHVEIQLNRSILLIVIDAVAKKMNKKNGYQSDDDN-------IRYKLNTQY 246
+ ++ ++ H L +L + +++ K+NG +SD+DN I++ T
Sbjct: 868 ILMSTNDSEKH---NLASQVLKLRRALESREDVKQNGVKSDEDNHHATSKRIKHDDGTTG 924
Query: 247 FNNNLKSPNKH 257
N L S N+H
Sbjct: 925 SCNVLPSTNRH 935
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 29.1 bits (62), Expect = 8.0
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 361 DDLTIQLNEEEANDLGEDLNQAFVNNGTKVSKRKSLNSEN--QMSTKHKKKQDSEPRIQG 418
+D++ Q E+E + G+ L +NG K+ +++ L ++ Q K K D E + +
Sbjct: 917 EDVSKQNKEQEQEEKGQSLPVDQKSNGDKIKQQEVLKQKDIKQDGKNDKAKDDKEKKSRD 976
Query: 419 NETE 422
+T+
Sbjct: 977 QKTD 980
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.128 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,999,068
Number of Sequences: 37544
Number of extensions: 462828
Number of successful extensions: 1198
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1184
Number of HSP's gapped (non-prelim): 23
length of query: 470
length of database: 14,793,348
effective HSP length: 85
effective length of query: 385
effective length of database: 11,602,108
effective search space: 4466811580
effective search space used: 4466811580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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