Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000403-TA|BGIBMGA000403-PA|IPR001873|Na+ channel,
amiloride-sensitive
(749 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 56 3e-09
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 56 3e-09
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 25 7.3
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 25 7.3
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 25 7.3
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 25 7.3
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 25 7.3
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 25 7.3
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 56.4 bits (130), Expect = 3e-09
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 520 TTSQDYEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMDVVNEPEVSLIAPETRQC 579
T+S ++ HSP + P +Y + I + ++ +T I D ++ + +A RQC
Sbjct: 291 TSSVGFKIIFHSPSETPKIT-DYAQYIPVGTENRIIITPKINDAADQ--IRKVAQAQRQC 347
Query: 580 RFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPIEFKD-HVCDFEGLKCLT 638
F+ E N+ + YS + C +C L C C + P ++D +C +C
Sbjct: 348 VFASEA--NLSYYSVYSRNNCELECEAKLILENCGCVLYYLPKLYEDTKICSRANARC-- 403
Query: 639 NNYKTLGKLKVPGTNEAGLVCNCLPSCIEPDY 670
Y+ + + + T + C+CLP C E Y
Sbjct: 404 --YEQI-RSSIAFTANTSISCSCLPGCFEISY 432
Score = 36.7 bits (81), Expect = 0.002
Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 7/177 (3%)
Query: 323 CGNLTVHGPSFLARKDVHFVYKVIYFLIYVQIWIAAVATIRRYYNHYQENTIRFTTRTDY 382
C N T+HG ++ + + +FL ++ + ++ I Y +Q + I
Sbjct: 40 CLNTTIHGLKYIGTVSLTLCERAYFFLTFLVVTACSIYFISNVYIKWQSSPIIIGLNPIA 99
Query: 383 LE-WNTTFASVTVCEIANVEKIWMISNEVSNDNFEK--FDRFIGDIAFFSGTCYTCLATC 439
N F +VT+C + + + + + + E+ F+ T Y +
Sbjct: 100 THIRNIPFPAVTICNMNQLRR--EAAERIEQNTLEQTVLQSICSIDGDFNDTQYEGKWSA 157
Query: 440 DFKPICSSDF--TQTASMFRTPCKDFFLSCKWNGRPIDCCKQFKPLATEYGTCFSIN 494
+ + S A PC +C++ +P C + F+ + T+ G C + N
Sbjct: 158 VKRMLLSVRLPPEDGAGCATQPCSALLKACRYAKQPERCSEIFQSIFTDEGLCCTFN 214
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 56.4 bits (130), Expect = 3e-09
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 520 TTSQDYEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMDVVNEPEVSLIAPETRQC 579
T+S ++ HSP + P +Y + I + ++ +T I D ++ + +A RQC
Sbjct: 291 TSSVGFKIIFHSPSETPKIT-DYAQYIPVGTENRIIITPKINDAADQ--IRKVAQAQRQC 347
Query: 580 RFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPIEFKD-HVCDFEGLKCLT 638
F+ E N+ + YS + C +C L C C + P ++D +C +C
Sbjct: 348 VFASEA--NLSYYSVYSRNNCELECEAKLILENCGCVLYYLPKLYEDTKICSRANARC-- 403
Query: 639 NNYKTLGKLKVPGTNEAGLVCNCLPSCIEPDY 670
Y+ + + + T + C+CLP C E Y
Sbjct: 404 --YEQI-RSSIAFTANTSISCSCLPGCFEISY 432
Score = 36.7 bits (81), Expect = 0.002
Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 7/177 (3%)
Query: 323 CGNLTVHGPSFLARKDVHFVYKVIYFLIYVQIWIAAVATIRRYYNHYQENTIRFTTRTDY 382
C N T+HG ++ + + +FL ++ + ++ I Y +Q + I
Sbjct: 40 CLNTTIHGLKYIGTVSLTLCERAYFFLTFLVVTACSIYFISNVYIKWQSSPIIIGLNPIA 99
Query: 383 LE-WNTTFASVTVCEIANVEKIWMISNEVSNDNFEK--FDRFIGDIAFFSGTCYTCLATC 439
N F +VT+C + + + + + + E+ F+ T Y +
Sbjct: 100 THIRNIPFPAVTICNMNQLRR--EAAERIEQNTLEQTVLQSICSIDGDFNDTQYEGKWSA 157
Query: 440 DFKPICSSDF--TQTASMFRTPCKDFFLSCKWNGRPIDCCKQFKPLATEYGTCFSIN 494
+ + S A PC +C++ +P C + F+ + T+ G C + N
Sbjct: 158 VKRMLLSVRLPPEDGAECATQPCSALLKACRYAKQPERCSEIFQSIFTDEGLCCTFN 214
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 606 IDAQLRMCNCTHHLSPIEFKDHVCDFEGLKCLTNNYKTLGKLKVPGTNEAGLV 658
+DA NCT S + +VCD+ L NN +TL K++ E L+
Sbjct: 107 VDATDDSLNCTFRFSD---EKNVCDYRFSYELANNRETLLKVQNLQCKEINLI 156
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 606 IDAQLRMCNCTHHLSPIEFKDHVCDFEGLKCLTNNYKTLGKLKVPGTNEAGLV 658
+DA NCT S + +VCD+ L NN +TL K++ E L+
Sbjct: 107 VDATDDSLNCTFRFSD---EKNVCDYRFSYELANNRETLLKVQNLQCKEINLI 156
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 606 IDAQLRMCNCTHHLSPIEFKDHVCDFEGLKCLTNNYKTLGKLKVPGTNEAGLV 658
+DA NCT S + +VCD+ L NN +TL K++ E L+
Sbjct: 107 VDATDDSLNCTFRFSD---EKNVCDYRFSYELANNRETLLKVQNLQCKEINLI 156
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 606 IDAQLRMCNCTHHLSPIEFKDHVCDFEGLKCLTNNYKTLGKLKVPGTNEAGLV 658
+DA NCT S + +VCD+ L NN +TL K++ E L+
Sbjct: 107 VDATDDSLNCTFRFSD---EKNVCDYRFSYELANNRETLLKVQNLQCKEINLI 156
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
ion/proton exchanger 3 protein.
Length = 1221
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 264 QQQVTFKLVKTVLFSLFHLSSGTRQIILLKLEPKIFNKMTVW 305
+Q V+ K T+ ++L LSS II + L N VW
Sbjct: 514 EQNVSHKSHTTIKYALKMLSSSAETIIFMFLGVATVNNKHVW 555
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 606 IDAQLRMCNCTHHLSPIEFKDHVCDFEGLKCLTNNYKTLGKLKVPGTNEAGLV 658
+DA NCT S + +VCD+ L NN +TL K++ E L+
Sbjct: 683 VDATDDSLNCTFRFSD---EKNVCDYRFSYELANNRETLLKVQNLQCKEINLI 732
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.323 0.136 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,604
Number of Sequences: 2123
Number of extensions: 31461
Number of successful extensions: 123
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 114
Number of HSP's gapped (non-prelim): 12
length of query: 749
length of database: 516,269
effective HSP length: 69
effective length of query: 680
effective length of database: 369,782
effective search space: 251451760
effective search space used: 251451760
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
- SilkBase 1999-2023 -