Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000403-TA|BGIBMGA000403-PA|IPR001873|Na+ channel,
amiloride-sensitive
(749 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000198-9|AAB53057.4| 684|Caenorhabditis elegans Hypothetical ... 51 3e-06
Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical pr... 49 1e-05
U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical pr... 47 4e-05
U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical pr... 47 6e-05
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 45 2e-04
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 45 2e-04
U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical pr... 45 2e-04
U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical pr... 44 4e-04
Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical pr... 37 0.045
AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein. 37 0.045
X58982-1|CAA41731.1| 498|Caenorhabditis elegans degenerin protein. 36 0.10
U58726-8|AAB00580.3| 768|Caenorhabditis elegans Mechanosensory ... 36 0.10
U53669-1|AAC47265.1| 768|Caenorhabditis elegans MEC-4 protein. 36 0.10
Z54218-2|CAA90956.1| 352|Caenorhabditis elegans Hypothetical pr... 34 0.42
Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical pr... 33 0.97
AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical ... 32 1.3
Z83123-9|CAB05605.1| 321|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z83123-3|CAB05604.1| 321|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 31 2.3
U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein. 31 3.0
U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated p... 31 3.0
Z81015-3|CAB02660.1| 411|Caenorhabditis elegans Hypothetical pr... 30 6.9
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 29 9.1
>AF000198-9|AAB53057.4| 684|Caenorhabditis elegans Hypothetical
protein T28F2.7 protein.
Length = 684
Score = 51.2 bits (117), Expect = 3e-06
Identities = 69/339 (20%), Positives = 118/339 (34%), Gaps = 38/339 (11%)
Query: 307 KFKEHTELLYRRFKHTCGNLTVHGPSFLAR-KDVHFVYKV-IYFLIYVQIWIAAVATIRR 364
K E + R +H T+HGP + K V+ V I+ + + + I
Sbjct: 69 KNTEGVSSITRESEHFSNTTTLHGPKRIYNGKGWSCVFWVFIWISSMIMLLTQVTSLISM 128
Query: 365 YYNHYQENTIRFTTRTDYLEWNTTFASVTVCEIANVEKIWMISNEVSNDNFEKFDRFIGD 424
Y + + + F E F VTVC +++ + E N + D +
Sbjct: 129 YISKPTVSQVSFLLS----EGGMQFPRVTVCSFNPIKRTTV---EALNSTKDLSDDLLDY 181
Query: 425 IAFFSGTCYTCLATCD----------FKPICSSDFTQTASMFRTP----CKDFFLSCKWN 470
+ F+ T D FK SS TA F C D F C +
Sbjct: 182 LMMFNSDAMTLYGRADAASLHSGDNVFKHYVSSHPNFTADNFFMDAGFSCGDMFKMCSFG 241
Query: 471 GRPIDCCKQFKPLATEYGTCFSINNKNVAGTQIPLVATSNRRIPGELEITTSQDYEAFIH 530
GR DCCK P+ ++ G CF++N + + + + + I L+I E
Sbjct: 242 GRRFDCCKYATPIFSDLGKCFTLNLQGSDKSWMKM--QTEPGIAAGLQIILDSHLEEQFD 299
Query: 531 SPED--VPFWNMEYDRRIRIVYGSQATVTFTIMDVVNEPEVSLIAPETRQCRF------- 581
S D P ++ ++ R S + F + + S++ ++
Sbjct: 300 SETDGVTPVFSSAFENGFRFYIHSSEEIPFLASEGIAVSPDSVVYSALSSSKYILLSSNA 359
Query: 582 ----SDETPENILAFKHYSYSVCITQCRIDAQLRMCNCT 616
SD P Y+ ++C T C+ +C C+
Sbjct: 360 WGNCSDSWPRGYDYSFPYTSAMCSTMCKAQYFQNLCGCS 398
>Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical
protein F23B2.3 protein.
Length = 626
Score = 48.8 bits (111), Expect = 1e-05
Identities = 102/489 (20%), Positives = 180/489 (36%), Gaps = 74/489 (15%)
Query: 310 EHTELLYRRFKHTCGNLTVHGPS--FLARKDVHFVYKVIYFL-----IYVQIWIAAVATI 362
E T + R +H C T+HGP F ++ ++ +I L + Q WI + +
Sbjct: 61 EGTISVKRETQHFCETTTMHGPKRIFKGKRIFTKLFWLIMVLGSLGLLIYQCWILSAS-- 118
Query: 363 RRYYNHYQENTIRFTTRTDYLEWNTTFASVTVCEIANVEKIWMIS----NEVSNDNFEKF 418
Y + + + F D +E F SVTVC + K ++ + +VS D
Sbjct: 119 --YLSKPIVSQVSFLIPEDGME----FPSVTVCNFTPIRKSYIEAMNRTGDVSPDMINYL 172
Query: 419 DRFIGDIAFFSG-TCYTCL--ATCDFKPICSSDFTQTASMF----RTPCKDFFLSCKWNG 471
+ +I G T L + + S T F C D C + G
Sbjct: 173 MNWFTEIPILLGNTDQQSLNKGNEELREYQSIHPNFTVDQFFMDASFDCSDLMKLCSFQG 232
Query: 472 RPIDCCKQFKPLATEYGTCFSI-------NNKNVAGTQIPLVATSNRRIPGELEITTSQD 524
DCC P T G CF++ N + G + L T + + + + +T D
Sbjct: 233 ESFDCCSLASPTLTPVGKCFTLDLSKSPMNKQTEPGIRAGLSLTLDANLDEQFDSSTGID 292
Query: 525 ----------YEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMDVVNEPEVSLIAP 574
+ F+H + +P N+ D S +V ++ +++ L+ P
Sbjct: 293 ALLPNSFVNGFRYFVHPKDTIP--NLASDE----YTVSPNSVAYS---AISKFRYVLLPP 343
Query: 575 -ETRQCRFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPIEFKDHVC-DFE 632
+ C +++ P I + Y+ C++ C+ + C CT L I C FE
Sbjct: 344 NDWGNC--TEDYPYGIQSNLSYTSGNCLSLCKAKYFMNQCGCTPALYNIGNNFQECTPFE 401
Query: 633 GLKCLTNNYKTL----GKLKV--PGTNEAGLVCNCLPSCIEPD---------YNVI-SKK 676
C+ N+ L GK++ P G C+ + +N SK
Sbjct: 402 TYNCVNNSLSLLNEETGKMEFQPPSCTRCGQQCDSQVYRADNSNGNQFSAGAFNYFNSKN 461
Query: 677 LSEPEKFLRARPSSFIMGSR--PYQRVTRQVARTTLDLVVAMGNCFGLCFGGSLLSIAEV 734
S ++++ + R Y + + DL+ A+G G+ GGS+++I E+
Sbjct: 462 SSWSVDYMKSNFQMIRIFYRDMSYTEYNQVQDASITDLLSAIGGNMGMFLGGSVITIVEL 521
Query: 735 VYYLCFKRW 743
+ W
Sbjct: 522 FLFFSKVFW 530
>U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical
protein C24G7.1 protein.
Length = 608
Score = 47.2 bits (107), Expect = 4e-05
Identities = 72/331 (21%), Positives = 124/331 (37%), Gaps = 54/331 (16%)
Query: 460 CKDFFLSCKWNGRPIDCCKQFKPLATEYGTCF----------SINNKNVAGTQIPLVATS 509
C D F C + G DCC P+ T G C+ S++ + G Q L T
Sbjct: 215 CSDIFKLCSFQGETFDCCSISTPVLTPLGKCYTLDLLSSTKPSMHKQTEPGIQAGLAITL 274
Query: 510 NRRIPGELEITTSQD----------YEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFT 559
+ + + + + D ++ F+H P +P + + + S V +T
Sbjct: 275 DAHLEEQFDGSNGMDALFTNSFVNGFQYFVHPPNTIPHLSSD---EFTVTPNS---VAYT 328
Query: 560 IMDVVNEPEVSLIAPETRQCRFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHL 619
++ L+ P + ++ P I + Y C++ C+ + C CT +
Sbjct: 329 ---AISSERFELL-PTNKWGNCTEHYPSGIKSDLPYLTGNCVSLCKAKFFMENCGCTPAV 384
Query: 620 SPIEFKDHVC-DFEGLKCLTN---NYKTLGKL--KVPGTNEAGLVCNCLPSCIEPDYNVI 673
E C FE L C+ N + GKL K+P + CN L I +N
Sbjct: 385 YNNERNLKECTPFETLACVNNHNGSNNATGKLEFKLPRCAQCAQQCNNL---IYRAFNSQ 441
Query: 674 SKKLS-EPEKFLRARPSSFIMGSRP---------YQRVT----RQVARTTL-DLVVAMGN 718
+ S ++ R S++ M YQ ++ QV ++ DL+ +G
Sbjct: 442 GNQFSARAFEWFRTNNSNWTMAHIKTNFQIIHIFYQDMSNTEYNQVQDASISDLLSNIGG 501
Query: 719 CFGLCFGGSLLSIAEVVYYLCFKRWKYVKDK 749
G+ G SL++I E+ Y W + K
Sbjct: 502 NMGMFLGMSLITITEICLYFSKIIWLGISKK 532
>U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical
protein C24G7.2 protein.
Length = 635
Score = 46.8 bits (106), Expect = 6e-05
Identities = 82/396 (20%), Positives = 142/396 (35%), Gaps = 60/396 (15%)
Query: 310 EHTELLYRRFKHTCGNLTVHGPSFLARKDVHFVYKVIYFLIYVQIWIAAVAT-----IRR 364
E T + R +H C T+HGP + + + +++LI V + + T
Sbjct: 71 EGTVSIKRETQHFCETTTMHGPKRIFQGKR---WATLFWLIMVSCSLGLLITQVFILASE 127
Query: 365 YYNHYQENTIRFTTRTDYLEWNTTFASVTVCEIANVEKIWMI----SNEVSNDNFEKFDR 420
Y + + + F D ++ F +T+C + + K ++ + EVS +
Sbjct: 128 YLSKPTVSDVSFLINEDGMD----FPLITICNLNPIRKTYVNEINKTGEVSPPMINYMMK 183
Query: 421 FIGDI-AFFSGTCYTCL--ATCDFKPICSSDFTQTASMFRT----PCKDFFLSCKWNGRP 473
+ +I G L + K + T F C D F C + G
Sbjct: 184 WFTEIPTLIGGADRPTLHEGNEELKLYMKNHLNFTVDSFFMNSGFSCPDIFKLCSFQGEI 243
Query: 474 IDCCKQFKPLATEYGTCF----------SINNKNVAGTQIPLVATSNRRIPGELEITTSQ 523
DCC + T G CF S++ + G Q L T + + + + +
Sbjct: 244 FDCCTLSTEVLTPLGKCFTLDLSSSTKASMHKQTEPGIQAGLAITLDAHLEEQFDGSNGM 303
Query: 524 D----------YEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMDVVNEPEVSLIA 573
D + F+H P +P + + + S TV F+ + ++ V L
Sbjct: 304 DALFTNSFVNGFRYFVHPPNTIPHLSSD---EFTV---SPNTVAFSAIS--SDRYVLLPT 355
Query: 574 PETRQCRFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPIEFKDHVC-DFE 632
+ C ++ P+ I + YS C++ C+ + C CT L IE C +E
Sbjct: 356 HQWGNC--TENFPDGIQSNLSYSSGNCLSLCKAKFYMENCGCTPALYNIENNLKECTPYE 413
Query: 633 GLKCLTN----NYKTLGKL--KVPGTNEAGLVCNCL 662
CL N K GK+ + P CN L
Sbjct: 414 TTTCLDNILAKPNKETGKIEFQTPNCKACAQQCNSL 449
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 45.2 bits (102), Expect = 2e-04
Identities = 65/319 (20%), Positives = 111/319 (34%), Gaps = 37/319 (11%)
Query: 462 DFFLSCKWNGRPIDCCKQFK-PLATEYGTCFSINNKNVAGTQIPLVATSNRRIPGELEIT 520
+ L C +N + + F +G C++ N A VA+ L +
Sbjct: 415 ELVLKCSFNQKDCQMDRDFTLHYDNTFGNCYTFNYNRTAE-----VASHRAGANYGLRVL 469
Query: 521 TSQDYEAFIHSPEDVPFWNMEYDRRI---RIVYGSQATVTFTIMDVVNEPEVSLIAPETR 577
+ ++ + E V F +D+ I +G A F V + + P
Sbjct: 470 LYANVSEYLPTTEAVGFRITVHDKHIVPFPDAFGYSAPTGFMSSFGVRMKQFIRLEPPYG 529
Query: 578 QCRFSDETPENILAFKHYSYSV--CITQCRIDAQLRMCNCTHHLSPIE--FKDHV--C-- 629
CR E + + + YSV C C + C C + P+ F ++ C
Sbjct: 530 HCRHGGEDAATFV-YTGFQYSVEACHRSCAQKVIVEACGCADPMYPVAEMFGNNTKPCQA 588
Query: 630 -DFEGLKCLTNNYKTLGKLKVPGTNEAGLVCNCLPSCIEPDYNVISKKLSEPE---KFLR 685
+ + +CL N LG+L G C C C E +Y V P K +
Sbjct: 589 VNMDQRECLRNTTLWLGELYSKGKEAIIPDCYCHQPCQETNYEVTYSSARWPSGSAKVME 648
Query: 686 ARPSSFIMGSR---------------PYQRVTRQVARTTLDLVVAMGNCFGLCFGGSLLS 730
P F+ + Y+ + A T ++ +G GL G S++S
Sbjct: 649 CLPGDFLCLEKYRKNAAMVQIFYEELNYETMQESPAYTLTSVLADLGGLTGLWIGASVVS 708
Query: 731 IAEVVYYLCFKRWKYVKDK 749
+ E+V + F YV+ +
Sbjct: 709 LLEIVTLIVFATQAYVRKR 727
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 45.2 bits (102), Expect = 2e-04
Identities = 65/319 (20%), Positives = 111/319 (34%), Gaps = 37/319 (11%)
Query: 462 DFFLSCKWNGRPIDCCKQFK-PLATEYGTCFSINNKNVAGTQIPLVATSNRRIPGELEIT 520
+ L C +N + + F +G C++ N A VA+ L +
Sbjct: 377 ELVLKCSFNQKDCQMDRDFTLHYDNTFGNCYTFNYNRTAE-----VASHRAGANYGLRVL 431
Query: 521 TSQDYEAFIHSPEDVPFWNMEYDRRI---RIVYGSQATVTFTIMDVVNEPEVSLIAPETR 577
+ ++ + E V F +D+ I +G A F V + + P
Sbjct: 432 LYANVSEYLPTTEAVGFRITVHDKHIVPFPDAFGYSAPTGFMSSFGVRMKQFIRLEPPYG 491
Query: 578 QCRFSDETPENILAFKHYSYSV--CITQCRIDAQLRMCNCTHHLSPIE--FKDHV--C-- 629
CR E + + + YSV C C + C C + P+ F ++ C
Sbjct: 492 HCRHGGEDAATFV-YTGFQYSVEACHRSCAQKVIVEACGCADPMYPVAEMFGNNTKPCQA 550
Query: 630 -DFEGLKCLTNNYKTLGKLKVPGTNEAGLVCNCLPSCIEPDYNVISKKLSEPE---KFLR 685
+ + +CL N LG+L G C C C E +Y V P K +
Sbjct: 551 VNMDQRECLRNTTLWLGELYSKGKEAIIPDCYCHQPCQETNYEVTYSSARWPSGSAKVME 610
Query: 686 ARPSSFIMGSR---------------PYQRVTRQVARTTLDLVVAMGNCFGLCFGGSLLS 730
P F+ + Y+ + A T ++ +G GL G S++S
Sbjct: 611 CLPGDFLCLEKYRKNAAMVQIFYEELNYETMQESPAYTLTSVLADLGGLTGLWIGASVVS 670
Query: 731 IAEVVYYLCFKRWKYVKDK 749
+ E+V + F YV+ +
Sbjct: 671 LLEIVTLIVFATQAYVRKR 689
>U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical
protein C24G7.4 protein.
Length = 663
Score = 45.2 bits (102), Expect = 2e-04
Identities = 69/363 (19%), Positives = 128/363 (35%), Gaps = 23/363 (6%)
Query: 316 YRRFKHTCGNLTVHGPS--FLARKDVHFVYKVIYFLIYVQIWIAAVATIRRYYNHYQENT 373
+R KH T+HGP F + + +I L + ++ Y++ +
Sbjct: 57 FRETKHFSSTTTMHGPKRIFYGKGVARAFWMLIVGLALAMLCFQIFILLQMYFSKPTLSQ 116
Query: 374 IRFTTRTDYLEWNTTFASVTVCEIANVEKIWMISNEVSNDNFEKFDRFIGDIAFFSGTCY 433
+ F E F +VTVC ++K ++ VS D + ++ + +
Sbjct: 117 VSFIVN----EGGMDFPAVTVCNFNPIKKSYVRELNVSGDLTGETLEYLLQTNMDAMFLF 172
Query: 434 TCLATCDFKPICSSDFTQTASMFRTPCKDFFLSCKWN-GRPIDCCKQFKPLATEYGTCFS 492
+ L + K T + F + ++ G DCCK K T G C+
Sbjct: 173 SNLDRHNLKETHDEAETYFQNHTDFQIIKFLRTAGYDCGEIFDCCKYMKQKVTSLGKCWE 232
Query: 493 INNKNVAGTQIPLVATSNRRIPGELEITTSQDYEAFIHSPEDVPFWNMEYDRRIRIVY-- 550
++ +N+A + + ++ + + E + + ++ Y+ R
Sbjct: 233 LDLRNLAPEWMRKQISPGSEAGLQIVVDAQLEEELKGENDDAKAIFSDIYENGFRYFIHP 292
Query: 551 -GSQATVTFTIMDVVNEPEV-SLIAPETRQC-------RFSDETPENILAFKHYSYSVCI 601
G+ A +T + V V S I T S+ PE F YS S C
Sbjct: 293 PGTNAQLTSEGISVSPSRTVYSAIKTVTHNLLNRGNWGNCSENWPEGYNTFLSYSASACR 352
Query: 602 TQCRIDAQLRMCNCTHHLSPIEFKDHVC-DFEGLKCLTNNY--KTLGK--LKVPGTNEAG 656
C C C ++ + +C +E + C+ N+ K G L++P E
Sbjct: 353 ALCIAQFFNDTCGCAPFTYNVDGRKKICAPYESITCMDNHMLKKVNGTDYLELPDCEECH 412
Query: 657 LVC 659
+ C
Sbjct: 413 MEC 415
>U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical
protein F28A12.1 protein.
Length = 613
Score = 44.0 bits (99), Expect = 4e-04
Identities = 68/345 (19%), Positives = 130/345 (37%), Gaps = 27/345 (7%)
Query: 315 LYRRFKHTCGNLTVHGPS--FLARKDVHFVYKVIYFLIYVQIWIAAVATIRRYYNHYQEN 372
+Y+ +H TV+GP F ++ + ++ I + V I+ +Y+ +
Sbjct: 32 VYQETQHFSTITTVNGPRRIFYGKRSAQIFWILVVISILAFLVYQIVILIQYFYSKPTLS 91
Query: 373 TIRFTTRTDYLEWNTTFASVTVCEIANVEKIWMISNEVSNDNFEKFDRFI-----GDIAF 427
I F T E F SVTVC + V+ ++ S D E+ ++ +
Sbjct: 92 QINFITN----EGAVYFPSVTVCNLNPVKTSFIKKLNSSGDLSEELLNYLLATKTNSMYM 147
Query: 428 FSGTCYTCLATCDFKPIC----SSDF--TQTASMFRTPCKDFFLSCKWNGRPIDCCKQFK 481
F+ L + DF + + C + F +C + G+ +CCK
Sbjct: 148 FNNANIFELKRAHLNALVYLANHPDFEIVNFLNSAQFDCDELFETCFYGGKQFNCCKYMT 207
Query: 482 PLATEYGTCFSINNKNVAGTQIPLVATSNRRIPGELE-ITTSQDYEAFIH----SPEDVP 536
T G C+ +N +N + S L+ I ++ E FI+ S ++
Sbjct: 208 QSITSLGRCWELNLRNETDAWLTKKGRSGTSPKTGLQIIANARQSEQFINFHYSSFQENG 267
Query: 537 FWNMEYDRRIRIVYGSQATVTFTIMDVVNEPEVSLIAPETRQCRFSDET---PENILAFK 593
F + + ++ +T + VVN +++ + + T PE+
Sbjct: 268 FRYFIHPPHVSPDLAAEG-ITVSPSRVVNSAIKTVLHDLLNHENWGNCTSSWPEHYNTNL 326
Query: 594 HYSYSVCITQCRIDAQLRMCNCTHHLSPIEFKDHVC-DFEGLKCL 637
YS S C C + ++C C+ + I+ VC +E + C+
Sbjct: 327 PYSSSACQALCVSNYFKKLCGCSPYSYNIDNNTQVCLPYEEVICM 371
>Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical
protein F02D10.5 protein.
Length = 638
Score = 37.1 bits (82), Expect = 0.045
Identities = 61/306 (19%), Positives = 108/306 (35%), Gaps = 38/306 (12%)
Query: 460 CKDFFLSCKWNGRPI-DCCKQFKPLATEYGTCFSINNKNVA--------GTQIPLVATSN 510
C++ F+SC + + +CC+ TE G CF ++N N G V N
Sbjct: 167 CEETFISCSFGREKLHNCCEHVTTEMTEVGVCFRLSNVNKKYRQWYSGNGFGWEFVLNGN 226
Query: 511 RRI---PGELEITTSQDYEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMDVVNEP 567
I L+ + + +H E P N Y + + SQ ++ ++
Sbjct: 227 NEIDDHADSLDFEPDRGFLIMVHESEKYPKIN-SYG--VAVSPDSQLHAAISMKNISLLD 283
Query: 568 EVSLIAPETRQCRFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPIEFKDH 627
+ + + R + P Y+ + C C++ +C C SP+ +
Sbjct: 284 KANWGSCSKGWNRNDTDVP--------YTATHCEIDCKLRKVRNLCGC----SPLAYSAR 331
Query: 628 VCDFEGLKCLTNNYKTLGKLKVPG-TNEAGLVCNCLPSCIEPDYNVI---------SKKL 677
C + + KV G N C+C C +++V S+ L
Sbjct: 332 ESGSNDTICTPYQIQQCFR-KVRGLDNRWEDECDCPSECNMLEFDVTNSYSDLDGRSRGL 390
Query: 678 SEPEKFLRARPSSFIMGSRPYQRVTRQVARTTLDLVVAMGNCFGLCFGGSLLSIAEVVYY 737
S + S Y+R+ +Q T DL+ + GL G S +++ E+ Y
Sbjct: 391 SSSKVESDISHVSLYFSHVAYERIEQQKQLQTADLLSNIAGSMGLFLGMSTVTLLEIFIY 450
Query: 738 LCFKRW 743
L W
Sbjct: 451 LFKSVW 456
>AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein.
Length = 638
Score = 37.1 bits (82), Expect = 0.045
Identities = 61/306 (19%), Positives = 108/306 (35%), Gaps = 38/306 (12%)
Query: 460 CKDFFLSCKWNGRPI-DCCKQFKPLATEYGTCFSINNKNVA--------GTQIPLVATSN 510
C++ F+SC + + +CC+ TE G CF ++N N G V N
Sbjct: 167 CEETFISCSFGREKLHNCCEHVTTEMTEVGVCFRLSNVNKKYRQWYSGNGFGWEFVLNGN 226
Query: 511 RRI---PGELEITTSQDYEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMDVVNEP 567
I L+ + + +H E P N Y + + SQ ++ ++
Sbjct: 227 NEIDDHADSLDFEPDRGFLIMVHESEKYPKIN-SYG--VAVSPDSQLHAAISMKNISLLD 283
Query: 568 EVSLIAPETRQCRFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPIEFKDH 627
+ + + R + P Y+ + C C++ +C C SP+ +
Sbjct: 284 KANWGSCSKGWNRNDTDVP--------YTATHCEIDCKLRKVRNLCGC----SPLAYSAR 331
Query: 628 VCDFEGLKCLTNNYKTLGKLKVPG-TNEAGLVCNCLPSCIEPDYNVI---------SKKL 677
C + + KV G N C+C C +++V S+ L
Sbjct: 332 ESGSNDTICTPYQIQQCFR-KVRGLDNRWEDECDCPSECNMLEFDVTNSYSDLDGRSRGL 390
Query: 678 SEPEKFLRARPSSFIMGSRPYQRVTRQVARTTLDLVVAMGNCFGLCFGGSLLSIAEVVYY 737
S + S Y+R+ +Q T DL+ + GL G S +++ E+ Y
Sbjct: 391 SSSKVESDISHVSLYFSHVAYERIEQQKQLQTADLLSNIAGSMGLFLGMSTVTLLEIFIY 450
Query: 738 LCFKRW 743
L W
Sbjct: 451 LFKSVW 456
>X58982-1|CAA41731.1| 498|Caenorhabditis elegans degenerin protein.
Length = 498
Score = 35.9 bits (79), Expect = 0.10
Identities = 53/251 (21%), Positives = 81/251 (32%), Gaps = 26/251 (10%)
Query: 451 QTASMFRTPCKDFFLSCKWNGRPIDCCKQFKP-LATEYGTCFSIN-NKNVAGTQIPLVAT 508
Q T ++ C +NG+ D F + +G+CF+ N N+ V T I
Sbjct: 164 QDRERLSTTKRELVHKCSFNGKACDIEADFLTHIDPAFGSCFTFNHNRTVNLTSIRAGPM 223
Query: 509 SNRRI------PGELEITTSQDYEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMD 562
R+ + T + IH ED PF + +G A +
Sbjct: 224 YGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPD---------TFGYSAPTGYVSSF 274
Query: 563 VVNEPEVSLIAPETRQCRFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPI 622
+ ++S + C +T + I + YS C C L+ C C P+
Sbjct: 275 GLRLRKMSRLPAPYGDCVPDGKTSDYIYSNYEYSVEGCYRSCFQQLVLKECRCGDPRFPV 334
Query: 623 EFKDHVCDFE---GLKCLTNNYKTLGKLKVPGTNEAGLVCNCLPSCIEPDYNVISKKLSE 679
CD KCL LG L C C C + Y+V
Sbjct: 335 PENARHCDAADPIARKCLDARMNDLGGL------HGSFRCRCQQPCRQSIYSVTYSPAKW 388
Query: 680 PEKFLRARPSS 690
P L+ + S
Sbjct: 389 PSLSLQIQLGS 399
>U58726-8|AAB00580.3| 768|Caenorhabditis elegans Mechanosensory
abnormality protein4 protein.
Length = 768
Score = 35.9 bits (79), Expect = 0.10
Identities = 53/251 (21%), Positives = 81/251 (32%), Gaps = 26/251 (10%)
Query: 451 QTASMFRTPCKDFFLSCKWNGRPIDCCKQFKP-LATEYGTCFSIN-NKNVAGTQIPLVAT 508
Q T ++ C +NG+ D F + +G+CF+ N N+ V T I
Sbjct: 434 QDRERLSTTKRELVHKCSFNGKACDIEADFLTHIDPAFGSCFTFNHNRTVNLTSIRAGPM 493
Query: 509 SNRRI------PGELEITTSQDYEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMD 562
R+ + T + IH ED PF + +G A +
Sbjct: 494 YGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPD---------TFGYSAPTGYVSSF 544
Query: 563 VVNEPEVSLIAPETRQCRFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPI 622
+ ++S + C +T + I + YS C C L+ C C P+
Sbjct: 545 GLRLRKMSRLPAPYGDCVPDGKTSDYIYSNYEYSVEGCYRSCFQQLVLKECRCGDPRFPV 604
Query: 623 EFKDHVCDFE---GLKCLTNNYKTLGKLKVPGTNEAGLVCNCLPSCIEPDYNVISKKLSE 679
CD KCL LG L C C C + Y+V
Sbjct: 605 PENARHCDAADPIARKCLDARMNDLGGL------HGSFRCRCQQPCRQSIYSVTYSPAKW 658
Query: 680 PEKFLRARPSS 690
P L+ + S
Sbjct: 659 PSLSLQIQLGS 669
>U53669-1|AAC47265.1| 768|Caenorhabditis elegans MEC-4 protein.
Length = 768
Score = 35.9 bits (79), Expect = 0.10
Identities = 53/251 (21%), Positives = 81/251 (32%), Gaps = 26/251 (10%)
Query: 451 QTASMFRTPCKDFFLSCKWNGRPIDCCKQFKP-LATEYGTCFSIN-NKNVAGTQIPLVAT 508
Q T ++ C +NG+ D F + +G+CF+ N N+ V T I
Sbjct: 434 QDRERLSTTKRELVHKCSFNGKACDIEADFLTHIDPAFGSCFTFNHNRTVNLTSIRAGPM 493
Query: 509 SNRRI------PGELEITTSQDYEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMD 562
R+ + T + IH ED PF + +G A +
Sbjct: 494 YGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPD---------TFGYSAPTGYVSSF 544
Query: 563 VVNEPEVSLIAPETRQCRFSDETPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPI 622
+ ++S + C +T + I + YS C C L+ C C P+
Sbjct: 545 GLRLRKMSRLPAPYGDCVPDGKTSDYIYSNYEYSVEGCYRSCFQQLVLKECRCGDPRFPV 604
Query: 623 EFKDHVCDFE---GLKCLTNNYKTLGKLKVPGTNEAGLVCNCLPSCIEPDYNVISKKLSE 679
CD KCL LG L C C C + Y+V
Sbjct: 605 PENARHCDAADPIARKCLDARMNDLGGL------HGSFRCRCQQPCRQSIYSVTYSPAKW 658
Query: 680 PEKFLRARPSS 690
P L+ + S
Sbjct: 659 PSLSLQIQLGS 669
>Z54218-2|CAA90956.1| 352|Caenorhabditis elegans Hypothetical
protein F37B12.3 protein.
Length = 352
Score = 33.9 bits (74), Expect = 0.42
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 435 CLATCDFKPICSSDFTQTASMFRTPCKDFFLSCKWNGRPIDCCKQFKPLATEYGTCFSIN 494
CLA F IC++ T+ + F T C FLS K + + + C ++ + EY FS
Sbjct: 28 CLAPRPFGVICANTVTRKCNHFCTRCA--FLSSKASAKHVVCFQKSEKAFPEYYLIFSYT 85
Query: 495 NK 496
N+
Sbjct: 86 NE 87
>Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical
protein F25D1.4 protein.
Length = 882
Score = 32.7 bits (71), Expect = 0.97
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 462 DFFLSCKWNGRPIDCCKQFKPLATEYGTCFSIN-NKNV 498
D F+SC++ G+ C + +P+ T +G C+S++ NK +
Sbjct: 175 DLFVSCEF-GKSGSCQDEIRPIYTPFGLCYSVSPNKTI 211
>AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical
protein T20B6.2 protein.
Length = 715
Score = 32.3 bits (70), Expect = 1.3
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 210 TNSKSKKVSFFRRLGRSKDSTPPRRTSSFTMQQPSVEMALRELTHPIHNEQL--KNQQQV 267
T + SK + L + S+P T T++ S++ + T + + K +
Sbjct: 133 TAAASKSIKDLGTLSGTLQSSPAEVT---TLENRSLKNIVETTTDDVQGKAAIEKMKADP 189
Query: 268 TFKLVKTVLFSLFHLSSGTRQII--LLKLEPKIFNKMTVWPKFKEHTELLYRRFKHTCGN 325
F+ VKT+L + +Q+I + L KI N + +KE E LY++F GN
Sbjct: 190 KFEEVKTILVTFQQHLVSLKQLIEGIHSLAGKI-NFSLIDDYYKEINEPLYKKFYVCLGN 248
Query: 326 LTVHGPSFLARKDVHFVYKV 345
+T P + +K V V++V
Sbjct: 249 ITNKWP--IVQKAVSVVHQV 266
>Z83123-9|CAB05605.1| 321|Caenorhabditis elegans Hypothetical
protein T04A11.1 protein.
Length = 321
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 383 LEWNTTFASVTVCEIANVEKIWMISNEVSNDNFE-KFDRFIG 423
L W T+ A V +C A + ++ NE+ N+N E KFD G
Sbjct: 68 LRWFTSTAEVPLCGHATLATSHVLFNEIGNENKELKFDTLTG 109
>Z83123-3|CAB05604.1| 321|Caenorhabditis elegans Hypothetical
protein T04A11.4 protein.
Length = 321
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 383 LEWNTTFASVTVCEIANVEKIWMISNEVSNDNFE-KFDRFIG 423
L W T+ A V +C A + ++ NE+ N+N E KFD G
Sbjct: 68 LRWFTSTAEVPLCGHATLATSHVLFNEIGNENKELKFDTLTG 109
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 31.5 bits (68), Expect = 2.3
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 583 DETPENILAFKHYSYSV--CITQCRIDAQLRMCNCTHHLSPIEFKDHVCDFEGLKCLTNN 640
D P++ +K + Y++ C C+ + C C + + D C + +K +
Sbjct: 286 DREPDSSDYYKDFIYTLETCFNGCKQRDTIAKCQCANPRLALGSTDTAC--QPIKADLDC 343
Query: 641 YKTLGKLKVPGTNEAGLV--CNCLPSCIEPDY 670
+TL + T L+ CNC P C E Y
Sbjct: 344 LQTLKGNQTSSTPNIDLLVECNCNPPCDESTY 375
>U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein.
Length = 777
Score = 31.1 bits (67), Expect = 3.0
Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 20/175 (11%)
Query: 462 DFFLSCKWNGRPIDCCKQFK-PLATEYGTCFSIN-NKNV------AGTQIPLVATSNRRI 513
+F L C +N + + FK + EYG C++ N N +V AG L N
Sbjct: 418 EFVLRCSFNSKDCSMERDFKLHVDPEYGNCYTFNFNDSVELKNSRAGPMYGLRLLLNVHQ 477
Query: 514 PGELEITTSQDYEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMDVVNEPEVSLIA 573
+ T + +H + PF + +G A F + E+ ++
Sbjct: 478 SDYMPTTEAAGVRLVVHEQDQEPFPD---------TFGYSAPTGFISSFGLKTKELHRLS 528
Query: 574 PETRQCRFSDE-TPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPIEFKDH 627
C SD P + +HYS C C L +C C P+ ++H
Sbjct: 529 APWGNC--SDTFRPVPYIYNEHYSPEGCHRNCFQLKVLEICGCGDPRFPLPSEEH 581
>U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated
protein 8 protein.
Length = 777
Score = 31.1 bits (67), Expect = 3.0
Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 20/175 (11%)
Query: 462 DFFLSCKWNGRPIDCCKQFK-PLATEYGTCFSIN-NKNV------AGTQIPLVATSNRRI 513
+F L C +N + + FK + EYG C++ N N +V AG L N
Sbjct: 418 EFVLRCSFNSKDCSMERDFKLHVDPEYGNCYTFNFNDSVELKNSRAGPMYGLRLLLNVHQ 477
Query: 514 PGELEITTSQDYEAFIHSPEDVPFWNMEYDRRIRIVYGSQATVTFTIMDVVNEPEVSLIA 573
+ T + +H + PF + +G A F + E+ ++
Sbjct: 478 SDYMPTTEAAGVRLVVHEQDQEPFPD---------TFGYSAPTGFISSFGLKTKELHRLS 528
Query: 574 PETRQCRFSDE-TPENILAFKHYSYSVCITQCRIDAQLRMCNCTHHLSPIEFKDH 627
C SD P + +HYS C C L +C C P+ ++H
Sbjct: 529 APWGNC--SDTFRPVPYIYNEHYSPEGCHRNCFQLKVLEICGCGDPRFPLPSEEH 581
>Z81015-3|CAB02660.1| 411|Caenorhabditis elegans Hypothetical
protein C11E4.3 protein.
Length = 411
Score = 29.9 bits (64), Expect = 6.9
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 460 CKDFFLSCKWNGRPIDCCKQF--KPLATEYGTCFSINNKNV 498
C+D F C+ G+ +DCC + + G C+ KNV
Sbjct: 189 CEDLFYECQLAGKILDCCNDLMVRRVVMRRGICYQ-TRKNV 228
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 29.5 bits (63), Expect = 9.1
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 269 FKLVKTVLFSLFHLSSGTRQII--LLKLEPKIFNKMTVWPKFKEHTELLYRRFKHTCGNL 326
F+ VKT+L + RQ+I + L KI N + +KE E LY +F GN+
Sbjct: 434 FEEVKTILVTFQQDLGSLRQLIDGIHSLAGKI-NFSLIDEYYKEINEPLYEKFYVCLGNI 492
Query: 327 TVHGPSFLARKDVHFVYKV 345
T P + +K V V++V
Sbjct: 493 TNKWP--IVQKAVSVVHQV 509
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.136 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,358,555
Number of Sequences: 27539
Number of extensions: 797268
Number of successful extensions: 1872
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1840
Number of HSP's gapped (non-prelim): 41
length of query: 749
length of database: 12,573,161
effective HSP length: 87
effective length of query: 662
effective length of database: 10,177,268
effective search space: 6737351416
effective search space used: 6737351416
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
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