GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000402-TA|BGIBMGA000402-PA|IPR000560|Histidine acid
phosphatase
         (756 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    29   0.089
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   2.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   2.5  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   3.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   3.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   3.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   3.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   3.3  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 29.5 bits (63), Expect = 0.089
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 511 LETSKNNDEIVSPPHTCLRNKEEAEKNYNYVQVVKYRNSPEYLAAKDRLQRRLGIDYPFT 570
           L+ SKN+ E  S      ++KE+   +YN + ++  RNSPE     + +   +  ++P+ 
Sbjct: 64  LDCSKNSPEKESEEK---KSKEKPPYSYNALIMMAIRNSPEKRLTLNGIYEYIMRNFPYY 120

Query: 571 NEN 573
            EN
Sbjct: 121 REN 123


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 507 KNFDLETSKNNDEIVSPPHTCLRNKEEAEKNYNYVQVVKY 546
           ++  ++ SKNND+ +    T   N E++  N+N  Q+ KY
Sbjct: 296 QDLSMKLSKNNDQCLDLSKTKETNLEKSNLNHN-EQLRKY 334


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 507 KNFDLETSKNNDEIVSPPHTCLRNKEEAEKNYNYVQVVKY 546
           ++  ++ SKNND+ +    T   N E++  N+N  Q+ KY
Sbjct: 188 QDLSMKLSKNNDQCLDLSKTKETNLEKSNLNHN-EQLRKY 226


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 109 FRPAFGKWMQKSAEGFVNGLANG----NLDIEKATTDFDIMDPYTT 150
           F  A G WMQK+ E  +  +       +L   KA  D  +M  YTT
Sbjct: 205 FEYAVGHWMQKATEHVIGCVLCSPGCFSLFRGKALMDKSVMKKYTT 250


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 109 FRPAFGKWMQKSAEGFVNGLANG----NLDIEKATTDFDIMDPYTT 150
           F  A G WMQK+ E  +  +       +L   KA  D  +M  YTT
Sbjct: 519 FEYAVGHWMQKATEHVIGCVLCSPGCFSLFRGKALMDKSVMKKYTT 564


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 109 FRPAFGKWMQKSAEGFVNGLANG----NLDIEKATTDFDIMDPYTTCGKYQR 156
           F  A G W+QK+ E  +  +       +L   KA  D ++M  YTT     R
Sbjct: 779 FEYAIGHWLQKATEHVIGCVLCSPGCFSLFRGKALMDDNVMKKYTTSSSEAR 830


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 109 FRPAFGKWMQKSAEGFVNGLANG----NLDIEKATTDFDIMDPYTTCGKYQR 156
           F  A G W+QK+ E  +  +       +L   KA  D ++M  YTT     R
Sbjct: 779 FEYAIGHWLQKATEHVIGCVLCSPGCFSLFRGKALMDDNVMKKYTTSSSEAR 830


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 109 FRPAFGKWMQKSAEGFVNGLANG----NLDIEKATTDFDIMDPYTT 150
           F  A G WMQK+ E  +  +       +L   KA  D  +M  YTT
Sbjct: 752 FEYAVGHWMQKATEHVIGCVLCSPGCFSLFRGKALMDKSVMKKYTT 797


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 109 FRPAFGKWMQKSAEGFVNGLANG----NLDIEKATTDFDIMDPYTT 150
           F  A G WMQK+ E  +  +       +L   KA  D  +M  YTT
Sbjct: 752 FEYAVGHWMQKATEHVIGCVLCSPGCFSLFRGKALMDKSVMKKYTT 797


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 109 FRPAFGKWMQKSAEGFVNGLANG----NLDIEKATTDFDIMDPYTTCGKYQR 156
           F  A G W+QK+ E  +  +       +L   KA  D ++M  YTT     R
Sbjct: 779 FEYAIGHWLQKATEHVIGCVLCSPGCFSLFRGKALMDDNVMKKYTTSSSEAR 830


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 109 FRPAFGKWMQKSAEGFVNGLANG----NLDIEKATTDFDIMDPYTTCGKYQR 156
           F  A G W+QK+ E  +  +       +L   KA  D ++M  YTT     R
Sbjct: 779 FEYAIGHWLQKATEHVIGCVLCSPGCFSLFRGKALMDDNVMKKYTTSSSEAR 830


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.135    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,088
Number of Sequences: 317
Number of extensions: 8617
Number of successful extensions: 25
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 11
length of query: 756
length of database: 114,650
effective HSP length: 62
effective length of query: 694
effective length of database: 94,996
effective search space: 65927224
effective search space used: 65927224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)