Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000402-TA|BGIBMGA000402-PA|IPR000560|Histidine acid
phosphatase
(756 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces pom... 74 6e-14
SPBC428.03c |pho4||thiamine-repressible acid phosphatase Pho4|Sc... 72 3e-13
SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr ... 68 4e-12
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 29 2.4
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 29 2.4
SPBC1289.14 ||SPBC8E4.10c|adducin|Schizosaccharomyces pombe|chr ... 29 2.4
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 29 3.2
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 28 4.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 5.5
SPBC1A4.06c |||mitochondrial matrix protein import protein|Schiz... 27 7.3
SPBC530.07c |||phosphomethylpyrimidine kinase|Schizosaccharomyce... 27 9.6
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 27 9.6
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 27 9.6
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 27 9.6
>SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 453
Score = 74.1 bits (174), Expect = 6e-14
Identities = 87/354 (24%), Positives = 139/354 (39%), Gaps = 25/354 (7%)
Query: 7 CEPISIWGLVRHGKRNP-GAELALTMKNAIVIREYVVSSYENGNSSLCAQDIENLRELGA 65
C+ + L RHG RNP G A ++ +++ + S+ + +
Sbjct: 58 CKIKQVHTLQRHGSRNPTGGNAAFDAVGIANFQQRLLNGSVPIDYSVSGNPLSFV-PTWT 116
Query: 66 DYGMFENAYQLSEEGYQEMMDIGKRFKQAFPKLLNKLESQSYTFRPA----FGKWMQKSA 121
NA LS G E+ D+G++F + + +L N YT W
Sbjct: 117 PVIEAANADALSSSGRVELFDMGRQFYERYHELFNASTYNIYTAAQQRVVDSALWYGYGM 176
Query: 122 EGF-VNGLANGNLDIEKATTDFDIMDPYTTCGKYQRDVKKNPEIYLESNKYLETTEFLAT 180
G V+ N L E AT + + Y C D P + N Y+
Sbjct: 177 FGEDVHNFTNYILVSENATAGSNSLSSYNACPASDADDFTTPALEAWRNVYMPPI----- 231
Query: 181 KDRIQRRLGIDYPLTNENISALYDLCRYTWSSKDKMSPWCALFTTEDLKVLEYAGDLKHY 240
+ R+ +Y LTN++I LY +C Y + +D S +C LF + D EY GDL
Sbjct: 232 RQRLNPYFS-NYNLTNDDILNLYGICSYEIALQD-YSEFCKLFNSVDFLNFEYEGDLSFS 289
Query: 241 YRNGYGNSI--NAHLGQIPLSDLFKSFQLAKDGKGKKIIAYFTHATMMDMLYTALNLFKD 298
Y G GNS+ + G + L S + + + +++ FTH + + TAL F D
Sbjct: 290 Y--GMGNSVKWGSIFGGAYANSLANSLR-SVENNTQQVFFAFTHDANIIPVETALGFFTD 346
Query: 299 DV---ELTGSLRNPDRKWRTSKLSIFGANMFAVLSRCNRENKTDYNVVFYLNEE 349
+ L S + + S+ F N+ L +C + Y V +NEE
Sbjct: 347 NTPENPLPTSYQVHSHSMKASEFVPFAGNLITELFQC---EDSKYYVRHLVNEE 397
Score = 63.7 bits (148), Expect = 9e-11
Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 35/319 (10%)
Query: 449 NANDLTNEGQEEMIEFGKRLQNAYPTLLNSLESHYSFRSTPDKKTESSAKSFAEGL---K 505
NA+ L++ G+ E+ + G++ Y L N+ S Y+ + ++ SA + G+
Sbjct: 123 NADALSSSGRVELFDMGRQFYERYHELFNA--STYNIYTAAQQRVVDSALWYGYGMFGED 180
Query: 506 IKNFD-----LETSKNNDEIVSPPHTCLRNKEEAEKNYNYVQVVKYRNSPEYLAA-KDRL 559
+ NF E + +S + C + + ++ + +RN Y+ + RL
Sbjct: 181 VHNFTNYILVSENATAGSNSLSSYNACPASDAD---DFTTPALEAWRNV--YMPPIRQRL 235
Query: 560 QRRLGIDYPFTNENIKTLYELCRFGWSGLEIKISPWCALFTTDDLKVLEYIEDLRYYYGS 619
+Y TN++I LY +C + + + S +C LF + D EY DL + YG
Sbjct: 236 NPYFS-NYNLTNDDILNLYGICSYEIALQDY--SEFCKLFNSVDFLNFEYEGDLSFSYGM 292
Query: 620 GYGDSLNIKRGQIALTNLLDSFENAKRGV---GKKIVTYFTDAAKINEVCSALHLYRD-- 674
G ++K G I +S N+ R V +++ FT A I V +AL + D
Sbjct: 293 GN----SVKWGSIFGGAYANSLANSLRSVENNTQQVFFAFTHDANIIPVETALGFFTDNT 348
Query: 675 -ENPLTGSRRDPHRRWRSSILSAFSANLFAVLNRCTIKNEPDYNVVFYLNEE--PLRSVC 731
ENPL S + ++S F+ NL L +C + Y V +NEE PL S C
Sbjct: 349 PENPLPTSYQVHSHSMKASEFVPFAGNLITELFQC---EDSKYYVRHLVNEEVFPL-SDC 404
Query: 732 EYGVCSWQEFENKLTPFLN 750
+G + + +L +LN
Sbjct: 405 GFGPSNTSDGMCELYAYLN 423
>SPBC428.03c |pho4||thiamine-repressible acid phosphatase
Pho4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 463
Score = 72.1 bits (169), Expect = 3e-13
Identities = 88/362 (24%), Positives = 154/362 (42%), Gaps = 30/362 (8%)
Query: 15 LVRHGKRNP-GAELALTMKNAIVIREYVVSSYENGNSSLCAQDIENLRELGADYGMF--- 70
L RHG RNP G + A + +A I + + NG+ + EN +
Sbjct: 66 LQRHGSRNPTGDDTATDVSSAQYI-DIFQNKLLNGSIPVNFSYPENPLYFVKHWTPVIKA 124
Query: 71 ENAYQLSEEGYQEMMDIGKRFKQAFPKLLNKLESQSYTFRPAFGKWMQKSAEGFVNGLAN 130
ENA QLS G E+ D+G+ Q F + ++ Y A + + SAE F G+
Sbjct: 125 ENADQLSSSGRIELFDLGR---QVFERYYELFDTDVYDINTAAQERVVDSAEWFSYGMFG 181
Query: 131 GNLDIEKATTDFDIMDPYTTCGKYQRDVKKNPEIYLESNKYLETTEFLATK--------- 181
++ + T+F ++ + G + + +Y ++N TTE T
Sbjct: 182 DDMQNK---TNFIVLPEDDSAGANSLAMYYSCPVYEDNNIDENTTEAAHTSWRNVFLKPI 238
Query: 182 -DRIQRRLGIDYPLTNENISALYDLCRYTWSSKDKMSPWCALFTTEDLKVLEYAGDLKHY 240
+R+ + Y LT ++ +LY +C Y + +D S +C+LFT + EY DL +
Sbjct: 239 ANRLNKYFDSGYNLTVSDVRSLYYICVYEIALRDN-SDFCSLFTPSEFLNFEYDSDLDYA 297
Query: 241 YRNGYGNSINAHLGQIPLSDLFKSFQL-AKDGKGKKIIAYFTHATMMDMLYTALNLFKD- 298
Y G + + LG +++L + + + +K+ FTH + + + AL F D
Sbjct: 298 YWGGPASEWASTLGGAYVNNLANNLRKGVNNASDRKVFLAFTHDSQIIPVEAALGFFPDI 357
Query: 299 --DVELTGSLRNPDRKWRTSKLSIFGANMFAVLSRCNRENKTDYNVVFYLNEEPLKPICE 356
+ L +TS F N+ L C+ +NK Y V +N++ + P+ +
Sbjct: 358 TPEHPLPTDKNIFTYSLKTSSFVPFAGNLITELFLCS-DNK--YYVRHLVNQQ-VYPLTD 413
Query: 357 QG 358
G
Sbjct: 414 CG 415
Score = 57.6 bits (133), Expect = 6e-09
Identities = 72/318 (22%), Positives = 135/318 (42%), Gaps = 24/318 (7%)
Query: 448 ENANDLTNEGQEEMIEFGKRLQNAYPTLLNSLESHYSFRSTPDKKTESSAKSFAEGL--- 504
ENA+ L++ G+ E+ + G+++ Y L ++ Y + ++ SA+ F+ G+
Sbjct: 125 ENADQLSSSGRIELFDLGRQVFERYYELFDT--DVYDINTAAQERVVDSAEWFSYGMFGD 182
Query: 505 ---KIKNFDL--ETSKNNDEIVSPPHTC-LRNKEEAEKNYNYVQVVKYRNSPEYLAAKDR 558
NF + E ++ ++C + ++N +RN A +R
Sbjct: 183 DMQNKTNFIVLPEDDSAGANSLAMYYSCPVYEDNNIDENTTEAAHTSWRNVFLKPIA-NR 241
Query: 559 LQRRLGIDYPFTNENIKTLYELCRFGWSGLEIKISPWCALFTTDDLKVLEYIEDLRYYYG 618
L + Y T ++++LY +C + + + S +C+LFT + EY DL Y Y
Sbjct: 242 LNKYFDSGYNLTVSDVRSLYYICVYEIALRDN--SDFCSLFTPSEFLNFEYDSDLDYAYW 299
Query: 619 SGYGDSLNIKRGQIALTNLLDSF-ENAKRGVGKKIVTYFTDAAKINEVCSALHLYRD--- 674
G G + NL ++ + +K+ FT ++I V +AL + D
Sbjct: 300 GGPASEWASTLGGAYVNNLANNLRKGVNNASDRKVFLAFTHDSQIIPVEAALGFFPDITP 359
Query: 675 ENPLTGSRRDPHRRWRSSILSAFSANLFAVLNRCTIKNEPDYNVVFYLNEE--PLRSVCE 732
E+PL + ++S F+ NL L C ++ Y V +N++ PL C
Sbjct: 360 EHPLPTDKNIFTYSLKTSSFVPFAGNLITELFLC---SDNKYYVRHLVNQQVYPLTD-CG 415
Query: 733 YGVCSWQEFENKLTPFLN 750
YG + +L+ +LN
Sbjct: 416 YGPSGASDGLCELSAYLN 433
>SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 68.1 bits (159), Expect = 4e-12
Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 21/306 (6%)
Query: 7 CEPISIWGLVRHGKRNPGAELALTMKNAIVIREYVVSSYENGNSSLCAQDIENLRELGAD 66
CE + L RHG RNP ++ T + NG+ + EN
Sbjct: 58 CEIQQVHLLQRHGSRNPTGDVTATDVYSSQYLNNFQEKLLNGSIPVNFSYPENPLCFIKQ 117
Query: 67 YGMF---ENAYQLSEEGYQEMMDIGKRFKQAFPKLLNKLESQSYTFRPAFGKWMQKSAEG 123
+ ENA QLS G E+ D+G++ Q + KL +S Y A + + +SA+
Sbjct: 118 WTPVIDAENADQLSSRGRLELFDLGRQLYQRYYKL---FDSYVYDINTAEQERVVESAKW 174
Query: 124 FVNGLANGNLDIEKATTDFDIMDPYTTCGKYQRDVKKNPEIYLESNKYLETTE------- 176
F GL G+ EK T+F ++ G + ++ ++N + T+
Sbjct: 175 FTYGLF-GDKMYEK--TNFILISEGKAAGANSLSMYNACPVFKDNNFHKNATDAAHAVWR 231
Query: 177 --FL-ATKDRIQRRLGIDYPLTNENISALYDLCRYTWSSKDKMSPWCALFTTEDLKVLEY 233
F+ +R+ + Y LT ++ +L+ +C Y + KD S +C++FT + EY
Sbjct: 232 NIFIEPIVNRLAKYFDSSYKLTINDVRSLFYICEYEIAIKDH-SDFCSIFTPSEFLNFEY 290
Query: 234 AGDLKHYYRNGYGNSINAHLGQIPLSDLFKSFQ-LAKDGKGKKIIAYFTHATMMDMLYTA 292
DL Y G + + LG +++L S + + +K+ FTH + + + A
Sbjct: 291 DSDLDQAYGGGPVSEWASTLGGAYINNLADSLRNVTNPDFDRKVFLAFTHDSNIIPVEAA 350
Query: 293 LNLFKD 298
L F D
Sbjct: 351 LGFFPD 356
Score = 66.9 bits (156), Expect = 1e-11
Identities = 80/318 (25%), Positives = 131/318 (41%), Gaps = 24/318 (7%)
Query: 448 ENANDLTNEGQEEMIEFGKRLQNAYPTLLNSLESHYSFRSTPDKKTESSAKSFAEGL--- 504
ENA+ L++ G+ E+ + G++L Y L +S Y + ++ SAK F GL
Sbjct: 125 ENADQLSSRGRLELFDLGRQLYQRYYKLFDSYV--YDINTAEQERVVESAKWFTYGLFGD 182
Query: 505 ---KIKNFDL--ETSKNNDEIVSPPHTCLRNKEEA-EKNYNYVQVVKYRNSPEYLAAKDR 558
+ NF L E +S + C K+ KN +RN +R
Sbjct: 183 KMYEKTNFILISEGKAAGANSLSMYNACPVFKDNNFHKNATDAAHAVWRNI-FIEPIVNR 241
Query: 559 LQRRLGIDYPFTNENIKTLYELCRFGWSGLEIKI-SPWCALFTTDDLKVLEYIEDLRYYY 617
L + Y T ++++L+ +C + + IK S +C++FT + EY DL Y
Sbjct: 242 LAKYFDSSYKLTINDVRSLFYICEYE---IAIKDHSDFCSIFTPSEFLNFEYDSDLDQAY 298
Query: 618 GSGYGDSLNIKRGQIALTNLLDSFENAKR-GVGKKIVTYFTDAAKINEVCSALHLYRD-- 674
G G G + NL DS N +K+ FT + I V +AL + D
Sbjct: 299 GGGPVSEWASTLGGAYINNLADSLRNVTNPDFDRKVFLAFTHDSNIIPVEAALGFFPDIT 358
Query: 675 -ENPLTGSRRDPHRRWRSSILSAFSANLFAVLNRCTIKNEPDYNVVFYLNEEPLRSV-CE 732
+NPL + ++S F+ NL L C ++ Y V +N++ + C
Sbjct: 359 PQNPLPTDKNIYTYSQKTSSFVPFAGNLITELFFC---SDSKYYVRHLVNQQVYPLIDCG 415
Query: 733 YGVCSWQEFENKLTPFLN 750
YG + +L +LN
Sbjct: 416 YGPSGTSDGLCELQAYLN 433
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 478 SLESHYSFRSTPDKKTESSA--KSFAEGLKIKNFDLETSKNNDEIVSPPHTCLRNKEEAE 535
SLE H +++ E A K + L K K+ + +PPH L++K +
Sbjct: 26 SLEEHEKKVQQKNEELEKKAADKISRDELPEKQLAQSNDKDKHSVSNPPHKTLKSKRQKG 85
Query: 536 KNYNYVQVVKYRNSPE 551
KN + ++ N P+
Sbjct: 86 KNNDRKVILFVGNLPK 101
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 191 DYPLTNENISALY-DLCRYTWSSKDKMSPWCALFTTEDLKVLEYAGDLKHYYRNGYG 246
D L + +Y D RY W S D M C T ++ +V++ + YY G
Sbjct: 89 DNNLLGSRTNFMYADPFRYWWQSSDTMGGICIAHTDDNQRVMDTDDTIPSYYYEPIG 145
>SPBC1289.14 ||SPBC8E4.10c|adducin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 324
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 443 NNIIIENANDLTNEGQEEMIEFGKRLQNAYPTLLNSLESHY 483
NN ++E D+T E ++G + +AY LL+ L+S Y
Sbjct: 282 NNKLVEKTFDVTREKHFSGAKYGIKELSAYMRLLDDLDSSY 322
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 28.7 bits (61), Expect = 3.2
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Query: 455 NEGQEEMIEFGKRLQNAYPTLLNSLESHYSFRS----TPDKKTESSAKSFAEGLKIKNFD 510
N GQ E + A+ LN +E+ SF S P K ++S + I +
Sbjct: 457 NPGQIEKFIMNGNKKGAFSIRLNHIENSISFSSDLFSNPIKSSDSVSLQSTPSELITSQL 516
Query: 511 LETSKNNDEIVSPPHT--CLRNKEEAEKNYNYVQVVKYRNSPEYLAAKDRLQRRLG 564
+K+ ++ T CL K++AE Y Q + +A + L+ R G
Sbjct: 517 TRIAKSLSSVLMRFDTDFCLLRKQQAEAAYERAQAGVEQERKAVIAQRSLLELRRG 572
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 74 YQLSEEGYQEMMDIGKRFKQAFPKLLNKLESQSYTFRPAFGKWMQKSAEGFVNGLANGNL 133
Y +S+E Y E +D K+ + P L ++ Y F GK K A + L N NL
Sbjct: 364 YLVSKEMYAEAIDAVKKLPEIPPSLQISELAKKYIFH-LLGKGQYKEAGMVIPSLYNDNL 422
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 433 DIQNLRNWKLNNIIIENANDLTNEGQEEMIEFGKRLQNAYPTLLNSLES------HYSFR 486
D+ L+ K +++ +LT EE + + + P L LES Y +
Sbjct: 1049 DVSILKQQKEELSVLKGVQELTINNLEEKVNYLEADVKQLPKLKKELESLNDKDQLYQLQ 1108
Query: 487 STPDKKTESSAKSFAEGLKIKNFDLETSKNNDEIVS 522
+T +K+ E+ K +K +LE + + +S
Sbjct: 1109 ATKNKELEAKVKECLNNIKSLTKELENKEEKCQNLS 1144
>SPBC1A4.06c |||mitochondrial matrix protein import
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 235 GDLKHYYRNGYGNSINAHLGQIPLSDLFKSFQLAK 269
G+ + Y N Y S H+G + L+D F F L K
Sbjct: 190 GEDEFYKENSYNLSSALHVGLLMLADRFTEFDLYK 224
>SPBC530.07c |||phosphomethylpyrimidine kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 242
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 64 GADYGMFENAYQLSEEGYQEMMDIGKRFKQAFPKLLNKLESQSYTFRPAFGKWMQKSAEG 123
G DY M A+ L+E Y + KQ ++E + +P+FGK+++ A
Sbjct: 154 GIDYFM---AFYLNEVIYHRAWKFVRESKQFQKNCPEEMEFVKWWGQPSFGKFVENLARS 210
Query: 124 FVN-GLANGNLDIEKATTDFD 143
+ + +DI K +F+
Sbjct: 211 IQDVPFTSATVDIAKKICNFE 231
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 15 LVRHGKRNPGAELALTMKNAIVIREYVVSSYENGNSSLCAQDIENLRELGADYGMFENAY 74
++R +R GA++ + K + +E+V +E N++ ++ +E+G E+A
Sbjct: 17 IIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQ--KEIGLKMKAKEDAS 74
Query: 75 QLSEE 79
+L EE
Sbjct: 75 ELLEE 79
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 159 KKNPEIY-LESNKYLETTEFLATKDRIQRRLGIDYPLTNEN 198
K P I+ +E + YL TE+L ++Q + PL N+N
Sbjct: 181 KVKPTIHQMELHPYLPQTEYLEKHKKLQIHVSAYSPLANQN 221
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 592 ISPWCALFTTDDLKVLEYIEDLRYYYGSGYGDSLNIK----RGQIALTNLLDSFENAKRG 647
++ W + + LK++ +ED +Y +G ++N + + LD+F NA G
Sbjct: 306 VTKWKSEHPEEFLKIIHKVED---FYRNGTLKTVNTELVSLKEDADEKTFLDTFLNAIEG 362
Query: 648 VGKKIVTY 655
GKKI+ +
Sbjct: 363 HGKKIIKF 370
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,726,517
Number of Sequences: 5004
Number of extensions: 168873
Number of successful extensions: 488
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 469
Number of HSP's gapped (non-prelim): 22
length of query: 756
length of database: 2,362,478
effective HSP length: 78
effective length of query: 678
effective length of database: 1,972,166
effective search space: 1337128548
effective search space used: 1337128548
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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