Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000402-TA|BGIBMGA000402-PA|IPR000560|Histidine acid
phosphatase
(756 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0463 + 34121421-34121560,34121728-34121812,34122129-341224... 69 1e-11
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 31 3.4
02_01_0648 + 4828668-4829585,4829677-4830330 31 3.4
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085... 30 5.9
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 30 5.9
02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,369... 30 7.8
>03_06_0463 +
34121421-34121560,34121728-34121812,34122129-34122428,
34123194-34123352,34123852-34123992,34124078-34124134,
34124534-34124672,34124954-34125058,34125159-34125376,
34125980-34126021,34126136-34126309
Length = 519
Score = 69.3 bits (162), Expect = 1e-11
Identities = 97/429 (22%), Positives = 176/429 (41%), Gaps = 48/429 (11%)
Query: 2 TLVSDCEPISIWGLVRHGKRNPGAELALTMKNAIVIREYVVSSYENGNSSLCAQDIEN-L 60
++ +C I + + RHG R P + + V + ++ + G S + I + +
Sbjct: 62 SMSDECRVIHLNLVARHGTRAPTKKRIKELDRLAVRLKALIDEAKQGPESDSLKKIPSWM 121
Query: 61 RELGADYGMFENAYQLSEEGYQEMMDIGKRFKQAFPKLLNK-LESQSYTFRPAFGKWMQK 119
+ + + +L EG +E+ ++ R K+ F L ++ Y+ R
Sbjct: 122 KGWESPWKGRVKGGELVSEGEEELYNLAIRVKERFQGLFDEEYHPDVYSIRATQVPRASA 181
Query: 120 SAEGFVNGLANGNLDIEKATTD-FDIMDP----------YTTCGKYQRDVKKNPEIYLES 168
SA F GL +G + F ++ + +C Y +D +K E +E
Sbjct: 182 SAVAFGLGLLSGKGKLGPVKNRAFSVLSESRASDICLRFFDSCETY-KDYRKRKEPDVEK 240
Query: 169 NKYLETTEFLATKDRIQRRLGIDYPLTNENISALYDLCRYTWSSKDKMSPWCALFTTEDL 228
K E + + + R +++ T +++S+L+ LC+ S + + C LF ++
Sbjct: 241 QKE-PILEHVTSA--LVNRYHLNF--TPKDVSSLWFLCKQEASLMNITNQACQLFNEAEV 295
Query: 229 KVLEYAGDLKHYYRNGYGNSINAHLGQIPLSDLFKSFQ---LAK-----DGKGKKIIAYF 280
LE+ DL+ + GYG SIN +G L D+ +S + +AK DG +K F
Sbjct: 296 YFLEWTDDLEGFVLKGYGESINYRMGLPLLKDVVQSMEEAIVAKEENHPDGTYEKARLRF 355
Query: 281 THATMMDMLYTALNLFKD-----DVELTGSLRNP-----DRKWRTSKLSIFGANMFAVLS 330
HA + L LF + ++ SL P R W+ S ++ F N L
Sbjct: 356 AHAETVVPFSCLLGLFLEGSDFAKIQREESLDIPPVPPQGRNWKGSVVAPFAGNNMLALY 415
Query: 331 RC---------NRENKTDYNVVFYLNEEPLK-PIC-EQGVCTWEEFENKFKTMNSNTDMC 379
+C +R+ K+ Y V NE P+ P C + C +EEF+ K + D
Sbjct: 416 QCPGKTDGGKISRDQKSSYFVQVIHNEAPVSMPGCGNKDFCPFEEFKEKIVEPHLKHDYD 475
Query: 380 QFKRCEPIS 388
+ P++
Sbjct: 476 ALCKIRPVA 484
Score = 64.1 bits (149), Expect = 4e-10
Identities = 95/416 (22%), Positives = 167/416 (40%), Gaps = 47/416 (11%)
Query: 384 CEPISIWGIMRHSKSYPLKEFGKSIEE-ALTIRDLVXXXXXXXXXXXXXQDIQNLRNWKL 442
C I + + RH P K+ K ++ A+ ++ L+ + ++ W+
Sbjct: 67 CRVIHLNLVARHGTRAPTKKRIKELDRLAVRLKALIDEAKQGPESDSLKKIPSWMKGWES 126
Query: 443 NNIIIENANDLTNEGQEEMIEFGKRLQNAYPTLLNSLESH---YSFRSTPDKKTESSAKS 499
+L +EG+EE+ R++ + L + E H YS R+T + +SA +
Sbjct: 127 PWKGRVKGGELVSEGEEELYNLAIRVKERFQGLFDE-EYHPDVYSIRATQVPRASASAVA 185
Query: 500 FAEGLKIKNFDLETSKNND-EIVSPPHT---CLRNKEEAEKNYNYVQV----VKYRNSPE 551
F GL L KN ++S CLR + E +Y + V+ + P
Sbjct: 186 FGLGLLSGKGKLGPVKNRAFSVLSESRASDICLRFFDSCETYKDYRKRKEPDVEKQKEPI 245
Query: 552 YLAAKDRLQRRLGIDYPFTNENIKTLYELCRFGWSGLEIKISPWCALFTTDDLKVLEYIE 611
L R ++ FT +++ +L+ LC+ S + I + C LF ++ LE+ +
Sbjct: 246 LEHVTSALVNRYHLN--FTPKDVSSLWFLCKQEASLMNIT-NQACQLFNEAEVYFLEWTD 302
Query: 612 DLRYYYGSGYGDSLNIKRGQIALTNLLDSF--------ENAKRGVGKKIVTYFTDAAKIN 663
DL + GYG+S+N + G L +++ S EN G +K F A +
Sbjct: 303 DLEGFVLKGYGESINYRMGLPLLKDVVQSMEEAIVAKEENHPDGTYEKARLRFAHAETVV 362
Query: 664 EVCSALHLYRDENPLTGSRRDPH----------RRWRSSILSAFSANLFAVLNRCTIKNE 713
L L+ + + +R+ R W+ S+++ F+ N L +C K +
Sbjct: 363 PFSCLLGLFLEGSDFAKIQREESLDIPPVPPQGRNWKGSVVAPFAGNNMLALYQCPGKTD 422
Query: 714 ---------PDYNVVFYLNEEPLRSV-C-EYGVCSWQEFENKLT-PFLNVTKD-LC 756
Y V NE P+ C C ++EF+ K+ P L D LC
Sbjct: 423 GGKISRDQKSSYFVQVIHNEAPVSMPGCGNKDFCPFEEFKEKIVEPHLKHDYDALC 478
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 31.1 bits (67), Expect = 3.4
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 492 KTESSAKSFAEGLKIKNFDLETS----KNNDEIVSPPHTCLRNKEEAEKNYNY-VQVVKY 546
K + A+S A + K DLET K NDE+ + KEEA+ N +Y +Q +
Sbjct: 936 KAATDAESRAAVAEAKCSDLETKLKSRKENDELFQLKEELEKYKEEAQANKSYMLQYKEI 995
Query: 547 RNSPEYLAAKDRLQRRLGIDYPFTNENIKTLYE 579
NS E +A +++ L D+ +E IK E
Sbjct: 996 ANSNE--SALKQMESALQ-DFKTESETIKKSLE 1025
>02_01_0648 + 4828668-4829585,4829677-4830330
Length = 523
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 558 RLQRRLGIDYPFTNENIKTL 577
RLQ+ +G YP T ENIKT+
Sbjct: 285 RLQKEVGAQYPLTTENIKTV 304
>04_04_1263 -
32207636-32207938,32208020-32208170,32208263-32208500,
32208604-32208814,32208927-32209108,32209196-32209297,
32210002-32211187,32212103-32212499,32212551-32212582,
32212885-32213157,32213307-32213394,32213486-32213723,
32213824-32214034,32214119-32214300,32214378-32214479,
32214801-32216224,32216751-32216822,32217688-32217719,
32218186-32218263,32218425-32218512,32218608-32218845,
32219060-32219162,32219386-32219558,32219644-32219745,
32219825-32220606,32220659-32221012,32224055-32224140,
32224250-32224400,32224534-32224771,32224876-32225119,
32225190-32225368,32225577-32225675,32225835-32227083
Length = 3195
Score = 30.3 bits (65), Expect = 5.9
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 210 WSSKDKMSPWCALFTTE---DLKVLEYAGDLKHYYRNGYGNSINAHLGQIPLSDLFKSFQ 266
W S D S F+ + DL+ + + G K Y RNG S+ Q P + +Q
Sbjct: 167 WRSHDDPSTGDFSFSLDPSSDLQGMTWNGT-KPYCRNGVRTSVTVSGAQYPSNSSLFMYQ 225
Query: 267 LAKDGKGKKIIAYFTHATMMDMLYTALNLFKDDVELTGSLRNPDRKW 313
D G K+ Y+++ +YT L L + S N W
Sbjct: 226 TLID-SGNKL--YYSYTVSDSSIYTRLTLDSTGTMMFLSWDNSSSSW 269
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 30.3 bits (65), Expect = 5.9
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 92 KQAFPKLLNKLESQSYTFRPAFGKWMQKSAEGFVNGLANGNLDIEK 137
K KL +++ + + P W +++ GLA+ LD++K
Sbjct: 1927 KNVINKLWRRIDKEGHQIIPNISSWWRRNENSSFKGLASSTLDLQK 1972
>02_01_0509 +
3694689-3695683,3695799-3695946,3696864-3696943,
3697214-3698062,3698193-3698337,3698426-3698677,
3698780-3699089,3699415-3699524
Length = 962
Score = 29.9 bits (64), Expect = 7.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 192 YPLTNENISALYDLCRYTWSSKDKMSPWC 220
YPL + + +L DL TW++K+ + C
Sbjct: 933 YPLKKDTVESLQDLAEVTWTAKELLFACC 961
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.135 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,418,828
Number of Sequences: 37544
Number of extensions: 885819
Number of successful extensions: 1761
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1751
Number of HSP's gapped (non-prelim): 12
length of query: 756
length of database: 14,793,348
effective HSP length: 88
effective length of query: 668
effective length of database: 11,489,476
effective search space: 7674969968
effective search space used: 7674969968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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