Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000402-TA|BGIBMGA000402-PA|IPR000560|Histidine acid
phosphatase
(756 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09870.1 68414.m01111 histidine acid phosphatase family prote... 89 1e-17
At4g28080.1 68417.m04027 expressed protein 36 0.099
At5g02520.1 68418.m00186 expressed protein 33 0.92
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 32 1.2
At5g61460.1 68418.m07712 structural maintenance of chromosomes (... 32 1.6
At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containi... 31 3.7
At2g17550.1 68415.m02031 expressed protein 31 3.7
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 30 6.5
At2g32905.1 68415.m04034 hypothetical protein contains Pfam prof... 30 6.5
At2g31040.1 68415.m03786 ATP synthase protein I -related contain... 30 6.5
At1g70430.1 68414.m08103 protein kinase family protein contains ... 30 6.5
>At1g09870.1 68414.m01111 histidine acid phosphatase family protein
contains Pfam profile PF00328: Histidine acid
phosphatase; similar to multiple inositol polyphosphate
phosphatase (GI:4105496)[Mus musculus]; EST gb|R64758
comes from this gene
Length = 487
Score = 88.6 bits (210), Expect = 1e-17
Identities = 107/405 (26%), Positives = 172/405 (42%), Gaps = 36/405 (8%)
Query: 384 CEPISIWGIMRHSKSYPLKEFGKSIEE-ALTIRDLVXXXXXXXXXXXXXQDIQNLRNWKL 442
C PI + + RH P K+ + +E A ++LV L WK
Sbjct: 55 CTPIHLNLVARHGTRSPTKKRLRELESLAGRFKELVRDAEARKLPSDKIPGW--LGQWKS 112
Query: 443 NNIIIENANDLTNEGQEEMIEFGKRLQNAYPTLLNSLESH---YSFRSTPDKKTESSAKS 499
+L +G++E+ + G R++ +P+L + H Y+ R+T + +SA +
Sbjct: 113 PWEGKVKGGELIRQGEDELYQLGIRVRERFPSLFEE-DYHPDVYTIRATQIPRASASAVA 171
Query: 500 FAEGLKIKNFDLETSKNNDEIVSPPH----TCLRNKEEAE--KNYNYVQVVKYRNSPEYL 553
F GL + +L +N V+ + T LR E + K+Y + E +
Sbjct: 172 FGMGLFSEKGNLGPGRNRAFAVTSENRASDTKLRFFECCQNYKSYRKAKEPAVDKLKEPV 231
Query: 554 AAKDRLQRRLGIDYPFTNENIKTLYELCRFGWSGLEIKISPWCALFTTDDLKVLEYIEDL 613
K D FT ++I +L+ LC+ S L + + C LFT ++ +LE+ +DL
Sbjct: 232 LNKITASVAKRYDLKFTKQDISSLWFLCKQEASLLNVT-NQSCELFTPSEVALLEWTDDL 290
Query: 614 RYYYGSGYGDSLNIKRGQIALTNLLDSFENAKRGVGKKIV--TY------FTDAAKINEV 665
+ GYG+SLN K G L ++L S E A + +K+ +Y F A I
Sbjct: 291 EVFLLKGYGNSLNYKMGVPLLEDVLHSMEEAIKAREEKLPPGSYEKARLRFAHAETIVPF 350
Query: 666 CSALHLYRD---------ENPLTGSRRDPHRR-WRSSILSAFSANLFAVLNRCTIKNEPD 715
L L+ D E PL + P R +R S ++ F N VL C ++ P
Sbjct: 351 SCLLGLFLDGSEFEKIQKEKPLELPPQPPKTRDFRGSTMAPFGGNNILVLYSCPAESSPK 410
Query: 716 YNVVFYLNEEPLR-SVCE-YGVCSWQEFENK-LTPFLNVTKD-LC 756
Y V NE P+ C+ C ++F+ K +TP L D LC
Sbjct: 411 YFVQVLHNEHPIAVPGCDGKDFCPLEDFKAKVVTPHLKHAFDNLC 455
Score = 79.4 bits (187), Expect = 8e-15
Identities = 101/399 (25%), Positives = 166/399 (41%), Gaps = 39/399 (9%)
Query: 5 SDCEPISIWGLVRHGKRNPGAELALTMKNAIVIREYVVSSYENGNSSLCAQDIEN-LREL 63
S+C PI + + RHG R+P + +++ + +V E L + I L +
Sbjct: 53 SECTPIHLNLVARHGTRSPTKKRLRELESLAGRFKELVRDAEA--RKLPSDKIPGWLGQW 110
Query: 64 GADYGMFENAYQLSEEGYQEMMDIGKRFKQAFPKLLNK-LESQSYTFRPAFGKWMQKSAE 122
+ + +L +G E+ +G R ++ FP L + YT R SA
Sbjct: 111 KSPWEGKVKGGELIRQGEDELYQLGIRVRERFPSLFEEDYHPDVYTIRATQIPRASASAV 170
Query: 123 GFVNGLAN--GNLDIEK-----ATTDFDIMDP---YTTCGKYQRDVKKNPEIYLESNKYL 172
F GL + GNL + T++ D + C + + +K E ++ K
Sbjct: 171 AFGMGLFSEKGNLGPGRNRAFAVTSENRASDTKLRFFECCQNYKSYRKAKEPAVDKLKEP 230
Query: 173 ETTEFLATKDRIQRRLGIDYPLTNENISALYDLCRYTWSSKDKMSPWCALFTTEDLKVLE 232
+ A+ + +R D T ++IS+L+ LC+ S + + C LFT ++ +LE
Sbjct: 231 VLNKITAS---VAKRY--DLKFTKQDISSLWFLCKQEASLLNVTNQSCELFTPSEVALLE 285
Query: 233 YAGDLKHYYRNGYGNSINAHLGQIPLSDLFKSFQLA--------KDGKGKKIIAYFTHAT 284
+ DL+ + GYGNS+N +G L D+ S + A G +K F HA
Sbjct: 286 WTDDLEVFLLKGYGNSLNYKMGVPLLEDVLHSMEEAIKAREEKLPPGSYEKARLRFAHAE 345
Query: 285 MMDMLYTALNLFKD-----DVELTGSLRNP-----DRKWRTSKLSIFGANMFAVLSRCNR 334
+ L LF D ++ L P R +R S ++ FG N VL C
Sbjct: 346 TIVPFSCLLGLFLDGSEFEKIQKEKPLELPPQPPKTRDFRGSTMAPFGGNNILVLYSCPA 405
Query: 335 ENKTDYNVVFYLNEEPLK-PICE-QGVCTWEEFENKFKT 371
E+ Y V NE P+ P C+ + C E+F+ K T
Sbjct: 406 ESSPKYFVQVLHNEHPIAVPGCDGKDFCPLEDFKAKVVT 444
>At4g28080.1 68417.m04027 expressed protein
Length = 1660
Score = 35.9 bits (79), Expect = 0.099
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 481 SHYSFRSTPDKKTESSAKSFAEGLKIKNFDLETSKNNDEI-VSPPHTCLRNKEEAEKNY 538
+H + S+ DK+ +S KS E K++NFDLE SK D++ + P + +++++ +
Sbjct: 1033 AHLTGESSSDKENKSETKS--EEKKVENFDLEQSKPQDQLKLVKPEATVHEDDDSDEGW 1089
>At5g02520.1 68418.m00186 expressed protein
Length = 236
Score = 32.7 bits (71), Expect = 0.92
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 435 QNLRNWKLNNIIIENANDLTNEGQEEMIEFGKRLQNAYPTLLNSLES-HYSFRSTPDKKT 493
+ L N K N++ + + NE + FGKRL L S + S S K
Sbjct: 35 EGLNNAKSNDVEKDVCVAINNEVISPVKGFGKRLSGTDVERLTSKNATKESLTSVQRKGR 94
Query: 494 ESSAKSFAEGL-KIKNFDLE-TSKNNDEIVSPPHTCLRNKEEAEKNYNYVQV 543
+K+F + L K K+ E T ++N +V P + EEAE+N ++ ++
Sbjct: 95 VKVSKAFQDPLSKGKSKKSEKTLQSNSNVVEPMNHFRSEAEEAEENLSWEKI 146
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 32.3 bits (70), Expect = 1.2
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 447 IENANDLTNEGQEEMIEFGKRLQNAYPTLLNSLESHYSFRSTPDKKTESSAKSFAEGLKI 506
+ + +D+++E + M +FGKRL+N LL+ L + KK K G K+
Sbjct: 103 LNDISDVSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKV 162
Query: 507 KNF 509
N+
Sbjct: 163 SNY 165
>At5g61460.1 68418.m07712 structural maintenance of chromosomes
(SMC) family protein very strong similarity to SMC-like
protein (MIM) [Arabidopsis thaliana] GI:5880614;
contains Pfam profile PF02463: RecF/RecN/SMC N terminal
domain
Length = 1057
Score = 31.9 bits (69), Expect = 1.6
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 17/117 (14%)
Query: 455 NEGQEEMIEFGKRLQNAYPTLLNSLESHYSFRSTPDKKTESSAKSFAEGL------KIKN 508
N + + + FGKRL N +L+ + F P + T L +IK+
Sbjct: 585 NYEEGKAVAFGKRLSNLKEVY--TLDGYKMFFRGPVQTTLPPLSRRPSRLCASFDDQIKD 642
Query: 509 FDLETSKNNDEIVSPPHTCLRNKEEAEKNYNYV-----QVVKYRNSPEYLAAKDRLQ 560
++E SK +EI + C+R K EAE+N + Q+ K+R+ E + L+
Sbjct: 643 LEIEASKEQNEI----NQCMRRKREAEENLEELELKVRQLKKHRSQAEKVLTTKELE 695
>At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 30.7 bits (66), Expect = 3.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 80 GYQEMMDIGKRFKQAFPKLLNKLESQSYTFRPAFGKWMQKSAEGF---VNGLANGNLDIE 136
GY+ + + GK F L N++ TF A G ++ V+GLA + +
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 137 KATTDFDIMDPYTTCG 152
K ++D Y CG
Sbjct: 483 KVAVSNSLIDMYAKCG 498
>At2g17550.1 68415.m02031 expressed protein
Length = 765
Score = 30.7 bits (66), Expect = 3.7
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 494 ESSAKSFAEGLKIKNFDLETSKNNDEI-VSPPHTCLRNKEEAEKNYNYVQVVKYRNSPEY 552
+ S K F G K NF + ++N+ E+ SP C EE +N +Y+ V ++P+
Sbjct: 485 DESIKDFVTGSKFNNF-YDRNENSTEVPPSPASVCSSTPEEFWRNVDYLSQV---STPDV 540
Query: 553 LAAKDRLQRR 562
+ + RR
Sbjct: 541 TVSDENELRR 550
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 29.9 bits (64), Expect = 6.5
Identities = 30/171 (17%), Positives = 68/171 (39%), Gaps = 1/171 (0%)
Query: 505 KIKNFDLETSKNNDEIVSPPHTCLRNKEEAEKNYNYVQVVKYRNSPEYLAAKDRLQRRLG 564
KI +LE S +N + A + + +Q + E A+++L +
Sbjct: 601 KINMLELEKSSSNRNLDDLVMVATEQNICAREKFAEIQEEIHAAREEAQVAREQLVSKES 660
Query: 565 IDYPFTNENIKTLYELCRFGWSGLEIKISPWCALFTTDDLKVLEYIEDLRYYYGSGYGDS 624
NEN +L + LE + + A T + E ++D ++ + +
Sbjct: 661 EVIDVINENFNSLVNVAT-EIEVLESEFQKYKASVETISSVMNEGLQDFAFFSPLIHDFT 719
Query: 625 LNIKRGQIALTNLLDSFENAKRGVGKKIVTYFTDAAKINEVCSALHLYRDE 675
L +++ +L++S++ + + KK++ + + E C+ L +E
Sbjct: 720 LFVRQSSEQHDSLINSYQTVQSSLKKKVLDVENEKLLLQEQCAGLQSQIEE 770
>At2g32905.1 68415.m04034 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 205
Score = 29.9 bits (64), Expect = 6.5
Identities = 29/138 (21%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Query: 447 IENANDLTNEGQEEMIEFGKRLQNAYPTLLNSLESHYSFRS-TPDKKTESSAKSFAEGLK 505
++ ++D E F +Q A + +H +S T D+ TE+ A+ F + +
Sbjct: 1 MDESDDPRVSESSEFSNFEMLIQVAVMVYDHEYGTHDEHKSKTIDEDTETEARIFGDTIP 60
Query: 506 IKNFDLETSKNNDEIVSPPHTCLRNKEEAE-KNYN------YVQVVKYRNSPEYLAAKDR 558
KN +S ++++ ++P + + +E +N N V + ++ ++
Sbjct: 61 RKNRTHRSSSSSNKTITPWTRVIEQQRSSELQNPNPESEPSSSSCVTHFKKRRHMDKEES 120
Query: 559 LQRRLGIDYPFTNENIKT 576
++RL ID P E I+T
Sbjct: 121 TRKRLKIDSPLEVEPIQT 138
>At2g31040.1 68415.m03786 ATP synthase protein I -related contains
weaks similarity to Swiss-Prot:P08443 ATP synthase
protein I [Synechococcus sp.]
Length = 350
Score = 29.9 bits (64), Expect = 6.5
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 484 SFRSTPDKKTESSAKSFAEGLKIKNFDLETSKNNDEIVSPPHTCLRNKEEAEKNYNYVQV 543
S +P K+ S SF+ + + + D++ SK E+ S + ++N+ + K+ Q+
Sbjct: 96 SLDPSPSKEKSSGFLSFSRVMSLDSMDVDLSK---ELASSSKSVVKNRLDTSKSEAKKQM 152
Query: 544 VKYRNSPEYLAAKDRLQR 561
K SP++ A R ++
Sbjct: 153 SKAIVSPKWKLAPTRREQ 170
>At1g70430.1 68414.m08103 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 594
Score = 29.9 bits (64), Expect = 6.5
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 485 FRSTPDKKTESSAKSFAEGLKIKNFDLETSKNNDEIVSPPHTCLRNKEEAEKNYN 539
F+ K + S + G+ NFDLE + +V P+ + N E E N N
Sbjct: 301 FKGINGDKEQLSQHEYMRGISAWNFDLEALRRQASLVIIPNEEIYNSEIQELNRN 355
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,504,790
Number of Sequences: 28952
Number of extensions: 812034
Number of successful extensions: 1957
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1945
Number of HSP's gapped (non-prelim): 16
length of query: 756
length of database: 12,070,560
effective HSP length: 87
effective length of query: 669
effective length of database: 9,551,736
effective search space: 6390111384
effective search space used: 6390111384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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