Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000401-TA|BGIBMGA000401-PA|IPR001320|Ionotropic
glutamate receptor, IPR001508|NMDA receptor
(787 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35054| Best HMM Match : Lig_chan (HMM E-Value=1.2e-32) 95 3e-19
SB_3063| Best HMM Match : Lig_chan (HMM E-Value=5.4e-13) 93 8e-19
SB_48199| Best HMM Match : Lig_chan (HMM E-Value=0) 85 3e-16
SB_15542| Best HMM Match : Lig_chan (HMM E-Value=0) 85 3e-16
SB_44957| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 3e-15
SB_35466| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-13
SB_2829| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-13
SB_12803| Best HMM Match : Lig_chan (HMM E-Value=0) 73 7e-13
SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35) 70 8e-12
SB_28347| Best HMM Match : SBP_bac_3 (HMM E-Value=2.6) 67 6e-11
SB_48410| Best HMM Match : Lig_chan (HMM E-Value=3.5e-05) 64 3e-10
SB_14165| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 3e-10
SB_1815| Best HMM Match : Lig_chan (HMM E-Value=1.4) 64 3e-10
SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11) 64 4e-10
SB_35425| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-09
SB_48408| Best HMM Match : Lig_chan (HMM E-Value=0.19) 62 1e-09
SB_32486| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-08
SB_3422| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-07
SB_12363| Best HMM Match : Lig_chan (HMM E-Value=2.5e-34) 56 1e-07
SB_177| Best HMM Match : SBP_bac_3 (HMM E-Value=0.032) 44 6e-04
SB_24494| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.008
SB_31659| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.013
SB_43803| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_7705| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.0
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.0
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 31 2.7
SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 4.7
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.7
SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05) 31 4.7
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.2
>SB_35054| Best HMM Match : Lig_chan (HMM E-Value=1.2e-32)
Length = 496
Score = 94.7 bits (225), Expect = 3e-19
Identities = 53/180 (29%), Positives = 102/180 (56%), Gaps = 7/180 (3%)
Query: 203 SEIPLISDDL---EDEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSG 259
+E+ ++ D L ++ +WNG++G+L+ G A ++ A L+++ AR+ V+DF+ P+ G
Sbjct: 22 AELHVVKDGLYGGQEPGTGQWNGLIGELLRGEADVAIADLTITDARSRVVDFTHPFLHVG 81
Query: 260 ISVLAAPNQRPDIPLLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGR--Q 317
+++L A + L+ FL PFS ELWI ++N+ + + I + SP+G G +
Sbjct: 82 MAILVAVYKNRSGWLVRFLEPFSTELWIVAVAAVNIVFVILWIIDKRSPYGHYRRGSSYK 141
Query: 318 RSKNFSISSALWVMWGLLCGHLVAFKA-PKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
K F + ++LW WG + H+ +A P S ++ + V+ + +YTA++AA++
Sbjct: 142 ERKKFHMIASLWFTWGTIF-HIDEVEARPMSNSSRTVTLVFAFGMLTLTNTYTASLAAVL 200
Score = 37.9 bits (84), Expect = 0.031
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYGSRQ 162
CC G A+DLL + ++ F L++V+DG YG ++
Sbjct: 2 CCKGYAIDLLRMLENDVGFKAELHVVKDGLYGGQE 36
>SB_3063| Best HMM Match : Lig_chan (HMM E-Value=5.4e-13)
Length = 880
Score = 93.1 bits (221), Expect = 8e-19
Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 5/160 (3%)
Query: 219 KWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPL-LAF 277
+WNGVV DL+ G A +S L + AR++V+DFS + +G+++L ++ P+ AF
Sbjct: 488 EWNGVVRDLIRGEADISID-LMTNEARSDVVDFSLRWTHAGLALLVLVGEKNVEPIDFAF 546
Query: 278 LLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFG---LNPWGRQRSKNFSISSALWVMWGL 334
PF+ +LW+ I ++NV +A+ I + LSP+G +N ++F + ++W WG+
Sbjct: 547 FDPFTWQLWVGIIATVNVYLVALWIADRLSPYGYHQINKRSVDNKRHFELDGSMWYCWGV 606
Query: 335 LCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAA 374
+ + P ++ ++ + F+++ + SYTAN+ A
Sbjct: 607 CFDNQFVEQRPAAYSSRAMSVCLATFALLCLTSYTANLTA 646
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 127 HCCYGLAMDLLENIAQELEFDFHLYIVEDGAYGSRQL 163
+CCYGLA+D+L + ELEF+ +Y V DG YG++ L
Sbjct: 448 YCCYGLAIDVLNYVKTELEFEPFVYFVRDGNYGAKNL 484
>SB_48199| Best HMM Match : Lig_chan (HMM E-Value=0)
Length = 771
Score = 84.6 bits (200), Expect = 3e-16
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 219 KWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFL 278
+W G++G+LV A ++ +++++ R +VIDFS+P+ I+++ D+ L AFL
Sbjct: 470 EWRGILGELVRQEADIAIGPITITAEREQVIDFSKPFLDFRIAMILQKPLEEDVDLFAFL 529
Query: 279 LPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNP----WGRQRSKNFSISSALWVMWGL 334
+PF +LW + I + I + SP+G G FS+ ++LW G
Sbjct: 530 MPFQKDLWACCCLVVGAVTILMWILDRFSPYGFRAEAKNTGEGEGDEFSLPNSLWFATGS 589
Query: 335 LCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAA 374
+ P+S + L + F++I +++YTAN+AA
Sbjct: 590 IL-QQGGDNTPRSGSGRVLAASFWLFTLILISTYTANLAA 628
>SB_15542| Best HMM Match : Lig_chan (HMM E-Value=0)
Length = 729
Score = 84.6 bits (200), Expect = 3e-16
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 222 GVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLLPF 281
G+VGDL+ A M+ A +++++ R IDFS+P+ S++ + +I L AF+ PF
Sbjct: 226 GMVGDLIDKKADMALAPITITAERESKIDFSKPFMDFMQSLIMKEMKEEEISLFAFVQPF 285
Query: 282 SPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSK----NFSISSALWVMWGLLCG 337
+W+ I + I + + + SPFG R + F++ ++LW +
Sbjct: 286 DGTVWLLIIVVVLFVTIMMFVVDLWSPFGHRAEARITDEGAGDEFNLFNSLWFATASML- 344
Query: 338 HLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGLFFHNAVDDFQGGDNWLSL 397
PKS + L + + F +I +++YTAN+AA N ++ +
Sbjct: 345 QQGPDNTPKSPSGRILASAFWFFILIIISTYTANLAAFFTKKTSKNFIETLDDLTKQKKI 404
Query: 398 KVGTAR-SSVAEYYVQRNNPHLAQQMRRYA-LQDIEEGIQRLR 438
G + S+A ++ + NNP R+ + +EG+ R+R
Sbjct: 405 SYGCLKGGSMASFFEKSNNPLYKTMFRQMEFVSSTKEGVARVR 447
>SB_44957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1336
Score = 81.0 bits (191), Expect = 3e-15
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 266 PNQRPDIPLLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKN--FS 323
P L +FL PF LW+ + S+++ A+ + + + SPFG R+ + +
Sbjct: 10 PQNEQSNSLDSFLRPFQIHLWLLVLLSVHIVAVILYLLDRFSPFGRFKLARKEKEETALN 69
Query: 324 ISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
+SSA+W WG+L + P+S+ + L VW GF++I VASYTAN+AA +
Sbjct: 70 LSSAMWFSWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFL 122
>SB_35466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 75.4 bits (177), Expect = 2e-13
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 12/242 (4%)
Query: 214 DEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQ-RPDI 272
D +W G+VGDLV G A ++ ++VS R+E IDF+ S + +L +Q
Sbjct: 454 DPKTKRWGGMVGDLVEGRADVALMGMTVSKVRSEAIDFTPAITPSKLVILMHASQAEVQN 513
Query: 273 PLLAFLLPFSPELWIA-IFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKNFSISSALWVM 331
L +L + ELW+ +F S+++ I + + SP+G + S+ + +
Sbjct: 514 SLFGYLRHLNLELWLTLLFLSISMIFIIWKL-DRTSPYGHFRANTEEEDRLSLPATFTYI 572
Query: 332 WGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTAN-IAALI--AGLFFHNAVDDF 388
W + + A +S + + ++ +++F+A+YTAN IA+L+ F + D
Sbjct: 573 WSSVFKLTLDGVAARSPSARTVYAIFSFATLVFIATYTANLIASLVQEKESFPITGIYDA 632
Query: 389 QGGDNWLSLKVGTARSSVAEYYVQRNN----PHLAQQMRRYALQDIEEGIQRLRSDSISS 444
+ D L K T E + +RN ++AQ +R + ++EG+ +L S + +
Sbjct: 633 KFQDASLGFKFATTAGGSIEAFFRRNKLPVFRNIAQNLR--TVNSVKEGVDKLTSRELDA 690
Query: 445 VI 446
I
Sbjct: 691 FI 692
Score = 33.5 bits (73), Expect = 0.67
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYGS 160
CC G +D+L ++ ++L F +Y+ + AYGS
Sbjct: 420 CCAGYVVDILLSLERDLRFHAEIYVRSERAYGS 452
>SB_2829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 74.9 bits (176), Expect = 2e-13
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 15/277 (5%)
Query: 199 LQQTSEIPLISDD---LEDEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPY 255
L+ +EI L+ D + D+ + +WNG++GDLV G A ++ + +SSAR +VIDF+
Sbjct: 474 LEFEAEIYLVEDKKYGVYDKKLKRWNGMIGDLVDGRAELALTSFEMSSARQDVIDFADAA 533
Query: 256 FFSGISVLAAP--NQRPDIPLLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNP 313
F V+ P + F+ PF LW+A ++ V I V + + SP+G
Sbjct: 534 FMYHDRVIIMPVKSSYTSHDWFGFMKPFGTHLWVAFVSTSVVLVIMVWLIDMYSPYGYKH 593
Query: 314 WGRQRSKNFSISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIA 373
+ + S S ++ + + A ++P + +F V+ ++I +++YTAN+
Sbjct: 594 HFQVFTLRDSFSDLSSTVFKINLDDVTA-RSPSA---RFTYAVFSFGTLILISTYTANLM 649
Query: 374 ALIAGL---FFHNAVDDFQGGDNWLSLKVGTARSSVAE-YYVQRNNPHLAQQMRRYALQD 429
+ F + + D + D +++G + S AE + Q N+ L + L
Sbjct: 650 VFLIEKKVEFPISGLHDPKLRDPNSGIRLGLLQGSNAELMFKQTNDKTLMAIGKNAVLVG 709
Query: 430 IEEGIQRLRSDSISSVIAKYS--SNGYMDILTEKWYG 464
E G + D I + S + + K+YG
Sbjct: 710 EETGQYDMLDDGTLDAIVDVTPYSEHFTALRPNKFYG 746
Score = 43.6 bits (98), Expect = 6e-04
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
CC G A+D+L N+ ++LEF+ +Y+VED YG
Sbjct: 458 CCKGFAIDILMNLERDLEFEAEIYLVEDKKYG 489
>SB_12803| Best HMM Match : Lig_chan (HMM E-Value=0)
Length = 1001
Score = 73.3 bits (172), Expect = 7e-13
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 14/233 (6%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQR-PDIPLLAFL 278
WNG+VGD+++G A M+ A L+++++R+ VIDFS PY GI +LA + + + F+
Sbjct: 365 WNGMVGDIITGEADMALATLTITASRSRVIDFSSPYGEVGIGILARTDTTLGSVVNMDFM 424
Query: 279 LPFSPELWIAIFTSLNVTAIAVAI-----YEWLSPFGLNPWGRQRSKNFSISSALWVMWG 333
+P S +LW I ++ I + + +EW G + + + S+ ++ W
Sbjct: 425 IPLSSQLWTVILATILFVIIVLWVLDRKSWEWYLK-GRSHFIPDYKRRVSLLESMTYSWS 483
Query: 334 LLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGLFF---HNAVDDFQG 390
P S + + + +I SYTA +AA F + ++D +
Sbjct: 484 TFVHVQAGTGLPMSTSARLVALFFALAMLIVNTSYTAELAAFKVKEQFVPPISGIEDPKM 543
Query: 391 GDNWLSLKVGTARSSVAEYYVQRNNP----HLAQQMRRYALQDIEEGIQRLRS 439
+ K T R S E Y + + + + M+ ++ +E+G+ +L S
Sbjct: 544 QNPPPDFKFATLRDSSTEAYFRFSKDEKLRRIYEHMKDNNVEMVEDGVAKLIS 596
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYGS 160
C G ++LLE I + + F + Y++ D YGS
Sbjct: 325 CISGQMIELLELIREYVHFTYEFYLIRDHKYGS 357
>SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35)
Length = 1003
Score = 69.7 bits (163), Expect = 8e-12
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
W+GV+ +L+ A ++ ++++S R +VIDF+QP+ SGI V+ P P FL
Sbjct: 422 WDGVINELIQERADLAVGPITITSHRWKVIDFTQPFMTSGIGVVMGTENSPK-PYFRFLE 480
Query: 280 PFSPELWIAIFTSLNVTAIAVAIYEWLSPFG 310
PF +LWI IF ++ + ++ +SPFG
Sbjct: 481 PFKSDLWITIFGAVLGMGVVNWLFSVVSPFG 511
>SB_28347| Best HMM Match : SBP_bac_3 (HMM E-Value=2.6)
Length = 212
Score = 66.9 bits (156), Expect = 6e-11
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 204 EIPLISDD---LEDEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGI 260
E+ L+ D+ +D +WNGVV ++++G A ++ +L++S R +VIDF+QPY G+
Sbjct: 116 EVYLVPDNNFGAQDPVTKEWNGVVREVLNGRADLAVTSLTISPERQKVIDFTQPYMDLGL 175
Query: 261 SVLAAPNQRPDIPLLAFLLPFSPELWIAI 289
+VL P+ + A L PF +LW+AI
Sbjct: 176 TVLIKPDPTEEKNPFAILRPFRYDLWMAI 204
>SB_48410| Best HMM Match : Lig_chan (HMM E-Value=3.5e-05)
Length = 1084
Score = 64.5 bits (150), Expect = 3e-10
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 214 DEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQ-PYFF-SGISVLAAPNQRPD 271
D + +W G++GDL+ G A ++ +L +S AR EV+DFS P+ + + V+A +
Sbjct: 438 DRNSKRWYGMIGDLIDGKAELALTSLELSLAREEVVDFSNVPFIYHDRVIVMAVKSSYTS 497
Query: 272 IPLLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFG 310
F PFS LWI + + I V I + SP+G
Sbjct: 498 HDWFGFTKPFSTSLWITFGAASVILVIVVWIIDKYSPYG 536
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
CC G +D+L ++ ++L+F +YIVEDG YG
Sbjct: 404 CCKGFVIDILISLERDLDFKAEVYIVEDGKYG 435
>SB_14165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1837
Score = 64.5 bits (150), Expect = 3e-10
Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 16/215 (7%)
Query: 215 EDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQ-RPDIP 273
+D+ WN +VG++V G A ++ A +++++AR + ++++ P I ++ + N+ + +
Sbjct: 595 QDLSSWNNLVGEVVLGRADLAAAPIAITNARLKDVEYASPIQQLEIYIVMSQNRAKISLD 654
Query: 274 LLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSK------NFSISSA 327
LAF+ PF LW IF + A+ Y W +P+GR K NF++ +
Sbjct: 655 WLAFIRPFDNSLWFVIFG----LSFALVFYIWWMD-QWSPYGRDNKKILSDPSNFTLPVS 709
Query: 328 LWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANI-AALIAGL--FFHNA 384
++ + + +S +F V+ ++I V+SYTAN+ A+L+ L F +
Sbjct: 710 FSYVFSSVFKINLDDVTARSPSARFTYAVFSFGTLIMVSSYTANLTASLVQELQTFPISG 769
Query: 385 VDDFQGGDNWLSLKVGTARSSVAEYYVQRN-NPHL 418
+ D + D T + + E+ ++R+ NP L
Sbjct: 770 IYDEKFQDPNSGFTFATEKGASVEFLLKRSANPAL 804
Score = 39.9 bits (89), Expect = 0.008
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 127 HCCYGLAMDLLENIAQELEFDFHLYIVED 155
HCCYG +DLL ++ ++L F +YIV+D
Sbjct: 568 HCCYGFTIDLLVSLERDLGVQFEMYIVQD 596
>SB_1815| Best HMM Match : Lig_chan (HMM E-Value=1.4)
Length = 698
Score = 64.5 bits (150), Expect = 3e-10
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 214 DEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQ-PYFF-SGISVLAAPNQRPD 271
D + +W G++GDL+ G A ++ +L +S AR EV+DFS P+ + + V+A +
Sbjct: 110 DRNSKRWYGMIGDLIDGKAELALTSLELSLAREEVVDFSNVPFIYHDRVIVMAVKSSYTS 169
Query: 272 IPLLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFG 310
F PFS LWI + + I V I + SP+G
Sbjct: 170 HDWFGFTKPFSTSLWITFGAASVILVIVVWIIDKYSPYG 208
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
CC G +D+L ++ ++L+F +YIVEDG YG
Sbjct: 76 CCKGFVIDILISLERDLDFKAEVYIVEDGKYG 107
>SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11)
Length = 1171
Score = 64.1 bits (149), Expect = 4e-10
Identities = 27/111 (24%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
+ G+VG ++ G A +S + L+++S R + ++FS+P+ +S+++ + L+AF+
Sbjct: 826 YTGIVGQIIKGKADLSTSPLTITSERLQYLEFSKPFMQFTMSLISKKFDNDNQYLMAFMR 885
Query: 280 PFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRS-KNFSISSALW 329
P+S +W+ L + I + + ++SP+G + ++ + F+ ++LW
Sbjct: 886 PYSSTVWLLTLAGLLLVTILMFVVNYISPYGYRKSHKSKNGEAFNFFNSLW 936
Score = 59.7 bits (138), Expect = 9e-09
Identities = 34/169 (20%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 222 GVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLLPF 281
G+ GD+ S A ++ L+++SAR + +DFS+P+ + ++ + I + F+ P+
Sbjct: 56 GLFGDIQSEKADLTTLPLTINSARLQYLDFSEPFMHVSMDLVTRKPEEKQIDITGFMTPY 115
Query: 282 SPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQ-RSKNFSISSALWVMWGLLCGHLV 340
+ +W+ +++ + SP+G + FS ++LW +
Sbjct: 116 TIPVWLMTMACWIFVTGCLSLVNYYSPYGHRLRDTEGDGDEFSFFNSLWFCLASML-QQG 174
Query: 341 AFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGLFFHNAVDDFQ 389
PK + + +++V++YTAN+AA + +A+++ +
Sbjct: 175 GDATPKMLSGRIVTGTLWFVILVWVSTYTANLAAFLTTSSSDSAINNLE 223
Score = 32.3 bits (70), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYG 159
G ++DL++ I+Q L F +++Y+ DG YG
Sbjct: 790 GFSIDLIKEISQMLGFAYNVYLSPDGLYG 818
>SB_35425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 62.9 bits (146), Expect = 1e-09
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 219 KWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLA----APNQRPDIPL 274
+WNG++ +LV+G ++ A L +SS R ++F+QPYF +++L A P I
Sbjct: 517 EWNGLMNELVTGKGDIT-AFLGISSQRLADVEFTQPYFTLQLTILVKTINASELNPQIH- 574
Query: 275 LAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFG-------LNPWGRQRSKNFSISSA 327
F PF +LW+ + S N+ + + + +SP G L F++ +
Sbjct: 575 WNFQDPFHWDLWVMVIASCNIVLVVIWALDRMSPRGHRRRLKILQQGNAPVDNGFTLLDS 634
Query: 328 LWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGF-SVIFVASYTANIAALI 376
+ +WG+ + + P+ ++++ F ++I V +Y AN+ A +
Sbjct: 635 MSYVWGVAFSKDIGAENTPRGPSARFVSIFFAFMALILVNTYCANLTAFL 684
Score = 37.1 bits (82), Expect = 0.054
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 126 THCCYGLAMDLLENIAQELEFDFHLYIVEDGAYGSR 161
T CC G +DL++ + ++L F+ +Y V DG +G++
Sbjct: 477 TFCCVGTQIDLIKLLERDLNFNAEIYFVPDGKWGTQ 512
>SB_48408| Best HMM Match : Lig_chan (HMM E-Value=0.19)
Length = 705
Score = 62.5 bits (145), Expect = 1e-09
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 214 DEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQ-PYFF-SGISVLAAPNQRPD 271
D + +W G++GDL+ G A ++ +L +S AR EVID+S P + + V+A +
Sbjct: 499 DRNSKRWCGMIGDLIDGKAELALTSLELSLAREEVIDYSNVPLMYHDRVIVMAVKSSYTS 558
Query: 272 IPLLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKNFSISSALWVM 331
F PFS LWI + + I V + + SP+G + + S S +
Sbjct: 559 HDWFGFTKPFSTTLWITFGAASVILVIVVWLIDKYSPYGHKHHFQVFTLRDSFSYLSSTV 618
Query: 332 WGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANI 372
+ + + A ++P + +F V+ +++ +++YTAN+
Sbjct: 619 FKINLDDVTA-RSPSA---RFTYAVFSFGTLVLISTYTANL 655
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
CC G +D+L ++ ++L+F +YIVEDG YG
Sbjct: 465 CCKGFVIDILISLERDLDFKAEVYIVEDGKYG 496
>SB_32486| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 57.6 bits (133), Expect = 4e-08
Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 22/162 (13%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLA----APNQRPDIPLL 275
WNG+V DL+ A M L+++ RA+VIDF++P G++++ A +Q P+ +
Sbjct: 473 WNGIVEDLMHNEADMG-VGLAITHERAKVIDFAEPNSKIGLAIIVKINNAEHQEPN-DVF 530
Query: 276 AFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKNFSI---SSALWVMW 332
FLLPF W+ + +++ + + WG +++ + ++ A++++
Sbjct: 531 KFLLPFDLNAWLCVLGIVHLFIVLI-------------WGTEKALHRNVPFFEIAMYLIS 577
Query: 333 GLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAA 374
L P+S ++L V+ S++ VA+Y+AN+AA
Sbjct: 578 IALGRDTGNDMRPQSMTGRWLSTVFSFISLVVVAAYSANLAA 619
Score = 34.7 bits (76), Expect = 0.29
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 127 HCCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
+C YG+A+DL+ I L F Y +EDG +G
Sbjct: 432 YCIYGIAVDLMIIIESRLGVRFEYYYIEDGNFG 464
>SB_3422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1270
Score = 56.0 bits (129), Expect = 1e-07
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 2 AKFAFLNLVQGTDGNNIWRQVGQVEGRNVRLHTIVWPGGRFVAHGHSDGARTIFRIVTAL 61
A++ FLNL Q +G W VG VE +V L I+WPGG V H S RT RIV
Sbjct: 29 ARYTFLNLRQ-INGRRYWENVGHVESGHVTLQQIIWPGG--VVHTPSGLPRTRLRIVMYE 85
Query: 62 APPFVMEGELDE-DGQCLRGLLC 83
P + +LD +C +GL C
Sbjct: 86 VAPLLYVRDLDPIYSECPQGLQC 108
Score = 54.8 bits (126), Expect = 3e-07
Identities = 26/83 (31%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 219 KWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFL 278
KW G++G++V+G A M+ +++S++S R++ +DFS+P+ +G ++L A + FL
Sbjct: 159 KWTGLIGEVVAGNADMAMSSISITSQRSKFVDFSEPFIHTGSTILVA-KRHGSFKGDGFL 217
Query: 279 LPF---SPELWIAIFTSLNVTAI 298
PF +P + FT++ T++
Sbjct: 218 KPFKIQNPLASVLKFTTIRDTSV 240
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 397 LKVGTARSSVAEYYVQRNNPHLAQQMRRYALQDIEEGIQRLRSDSISSVI 446
LK T R + E Y + N PH+ MR Y EG++ ++ I + I
Sbjct: 230 LKFTTIRDTSVEKYFKINFPHVYSFMRNYRFNHSSEGVRAVKEGVIDAFI 279
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 126 THCCYGLAMDLLENIAQELEFDFHLYIVEDGAYGS 160
T CCYGL +DL++ +++++ F + ++ G GS
Sbjct: 120 TKCCYGLCIDLIKLLSRDIGFIPVIETIQGGRAGS 154
>SB_12363| Best HMM Match : Lig_chan (HMM E-Value=2.5e-34)
Length = 960
Score = 55.6 bits (128), Expect = 1e-07
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 214 DEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLA--APNQRPD 271
DE WNG+V +L+ ++ L +S+ RA V+DF++PY SGI +L + +
Sbjct: 445 DEVNKTWNGIVKELLDDKGDITLD-LYISARRATVLDFTEPYAPSGIRLLVKERSGKGGN 503
Query: 272 IPLLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSP 308
I L++L PF+ +W+ + S+ + ++ + + E L+P
Sbjct: 504 IYWLSYLRPFTMNVWLTLLGSMGIMSLFLWLVEKLAP 540
Score = 39.9 bits (89), Expect = 0.008
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
CCYG A+D+LE I Q L F+ L EDG +G
Sbjct: 411 CCYGFAIDVLELIKQALNFEPELRFSEDGQFG 442
>SB_177| Best HMM Match : SBP_bac_3 (HMM E-Value=0.032)
Length = 619
Score = 43.6 bits (98), Expect = 6e-04
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYGS 160
CCYG+ +DLL I ++ F F LY+V DG YGS
Sbjct: 345 CCYGVMIDLLLLIQKQSGFTFELYLVRDGRYGS 377
Score = 42.3 bits (95), Expect = 0.001
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 214 DEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQR 269
D ++ + NG++GD+ G A M+ A ++++ R +DF+ PY + ++ L ++
Sbjct: 379 DPELREMNGMIGDVARGTADMALATITITQERLRYVDFTTPYAGNSLTFLVKKQRK 434
>SB_24494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 39.9 bits (89), Expect = 0.008
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 199 LQQTSEIPLISDD---LEDEDVMKWNGVVGDLVSGAAHMSFAALSVSSARA 246
L+ +E+ L+ D+ + DE WNG+VGDLV G A M+ L VS + A
Sbjct: 460 LEINAEVYLVMDESFGIFDEKKGTWNGMVGDLVEGKAEMALTTLQVSPSMA 510
Score = 33.1 bits (72), Expect = 0.88
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 127 HCCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
HC GL DLL ++ ++LE + +Y+V D ++G
Sbjct: 443 HCYSGLMFDLLLSLERDLEINAEVYLVMDESFG 475
>SB_31659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 39.1 bits (87), Expect = 0.013
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 227 LVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGIS-VLAAPNQRPDIPLLAFLLPFSPEL 285
L+ A ++ + ++S R + +DF+QPYF G V+ + L FL PF L
Sbjct: 280 LIFEKADLAVSTFTISPEREKAVDFTQPYFSLGYKIVMKKAIKEKKSNLWGFLDPFELTL 339
Query: 286 WIAIFTS 292
W AI S
Sbjct: 340 WAAIVVS 346
>SB_43803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 232 AHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLLPFS 282
A +S + L+++S R + ++FS+P+ +S+++ + L+AF+ P+S
Sbjct: 2 ADLSTSPLTITSERLQYLEFSKPFMQFTMSLISKKFDNDNQYLMAFMRPYS 52
>SB_7705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 32.3 bits (70), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYG 159
G ++DL++ I+Q L F +++Y+ DG YG
Sbjct: 49 GFSIDLIKEISQMLGFAYNVYLSPDGLYG 77
>SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 31.9 bits (69), Expect = 2.0
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 594 LSPSPDTSHRSPRQGRSPRQLRSPKGR--RKRCSLAGLNVRRFSTDSVLGSDSVSNIYER 651
LS S S + G+ P++ S G+ + R L G VRR ++ + + ER
Sbjct: 349 LSESASMSTPTGLSGKQPKRRLSESGKPGKTRRFLDGF-VRRSTSSNSVKEGRFGRCSER 407
Query: 652 TCHNIGRRLSRDVSCLTNSPPDLNTRLRTP---SPMIRRTEASSTRSYQDVSLRSENYVS 708
H+ + R+ +C+TN L + TP + R +++ D R E+ +S
Sbjct: 408 LGHSFSTQSIREGNCMTND--TLGKSVSTPVIKDSLSRDVSCHTSQEILDEVERRESVIS 465
Query: 709 TDA 711
DA
Sbjct: 466 GDA 468
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGS 160
G MDLL + +++ F + + + EDG+YGS
Sbjct: 652 GFCMDLLIRLGEKVNFTYSVSLSEDGSYGS 681
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 598 PDTSHRSPRQGRSPRQLRSPKGRRKRCSLAGLNVRRFSTDSVLGSDSVSNIYERTCHNIG 657
P ++ PR + SPK + C RR + +S+L SDS+S C+++G
Sbjct: 194 PKSTPTDPRTRNDTEE--SPKSTPRNCGNGQRKSRRHTCNSLLNSDSISKQLVHYCNSLG 251
>SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 31.5 bits (68), Expect = 2.7
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 428 QDIEEGIQR-LRSDSIS-SVIAKYSSNGYMDILTEKWY--GGLPCFKLSPDYGIQPKPLG 483
QD+E +R R D +S IA+Y ++G +I+ E L C +S G+ PKP
Sbjct: 199 QDLEREARREQRLDDVSFEGIARYITSGKCNIINELQLLKDCLGCLGVSKHIGMNPKPFF 258
Query: 484 VAAVA 488
VAA A
Sbjct: 259 VAAKA 263
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/47 (29%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 530 SRNIMFFSQKEHEQRRRRKSKAQLYEMIQAIRRVQQRDHSLGSIKEQ 576
S +I Q ++++ + R+S+ ++ E++ A++RV Q +H L + KE+
Sbjct: 2417 SEHIFTTIQSDYKKLQERESELEI-ELLSALKRVSQLEHELQAEKER 2462
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 30.7 bits (66), Expect = 4.7
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 631 VRRFSTDSVLGSDSVSNIYE--RTCHNIGRRL---SRDVSCLTNSPPDLNTRLRTPSPMI 685
++ FSTD ++ SDSV NI E R C NI L + + L D+ + +PS +
Sbjct: 3637 MQNFSTDFLIDSDSVDNIPELLRKCRNIDADLIHGQKQLDELGRKIEDMRASI-SPSEQV 3695
Query: 686 RRTEASSTRS-----YQDVSLRSENYVSTDAPTSRASIDILISDEH 726
+T S +Q ++ N V+ + S + IS+ H
Sbjct: 3696 NIEGIDTTISELISKWQSTKTQAVNTVTGLTEVNNLSETVAISERH 3741
>SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05)
Length = 481
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGSR 161
G ++DL+ IA+ L F F++ DG YG R
Sbjct: 435 GYSIDLITKIAELLSFKFYIVESPDGKYGGR 465
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.9 bits (64), Expect = 8.2
Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 3/123 (2%)
Query: 596 PSPDTSHRSPRQGRSPRQL--RSPKGRRKRCSLAGLNVRRFSTDSVLGSDSVSNIYERTC 653
P D PRQ + RQ ++ K + A R+ T + + ++
Sbjct: 181 PDQDKQAARPRQAKQARQAGRKTSKPQDHTARQARQASRKTKTSKTSKTSKPQDQDKQDK 240
Query: 654 HNIGRRLSRD-VSCLTNSPPDLNTRLRTPSPMIRRTEASSTRSYQDVSLRSENYVSTDAP 712
+ + + SC T+ P D + + P R+T+ S T QD S
Sbjct: 241 RDKREKKDKQGASCKTSKPQDQDKQAARPRQASRKTKTSKTSKPQDQQATGSRQASCKTK 300
Query: 713 TSR 715
TS+
Sbjct: 301 TSK 303
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,649,383
Number of Sequences: 59808
Number of extensions: 925877
Number of successful extensions: 2463
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2383
Number of HSP's gapped (non-prelim): 65
length of query: 787
length of database: 16,821,457
effective HSP length: 88
effective length of query: 699
effective length of database: 11,558,353
effective search space: 8079288747
effective search space used: 8079288747
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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