Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000401-TA|BGIBMGA000401-PA|IPR001320|Ionotropic
glutamate receptor, IPR001508|NMDA receptor
(787 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 109 6e-24
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 109 6e-24
AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic gl... 109 6e-24
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 100 5e-21
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 100 5e-21
U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic glut... 96 7e-20
L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate recep... 96 7e-20
Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical pr... 95 1e-19
AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic gl... 95 1e-19
AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic gl... 89 1e-17
AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate rec... 89 1e-17
U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate rece... 83 6e-16
AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic gl... 83 6e-16
U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate recep... 81 3e-15
AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic gl... 81 3e-15
U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate rece... 78 2e-14
U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate rece... 78 2e-14
AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA iono... 78 2e-14
U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate recep... 78 3e-14
AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic gl... 78 3e-14
U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate recep... 50 8e-06
AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic gl... 50 8e-06
AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical ... 37 0.048
AC006637-6|AAM54177.1| 328|Caenorhabditis elegans Glutamate rec... 37 0.048
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 34 0.45
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 34 0.45
AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical ... 33 0.59
AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical ... 33 0.59
AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical ... 33 0.59
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 33 0.78
AF016445-1|AAC69057.2| 367|Caenorhabditis elegans Serpentine re... 33 1.0
Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 32 1.8
Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 4.2
AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical ... 31 4.2
Z54270-5|CAA91031.1| 1302|Caenorhabditis elegans Hypothetical pr... 30 5.5
Z54270-4|CAA91030.1| 1767|Caenorhabditis elegans Hypothetical pr... 30 5.5
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 29 9.6
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 29 9.6
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 109 bits (263), Expect = 6e-24
Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 13/238 (5%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
WNG++ DL+ A M +L ++S RA IDFS P+ +GIS++ P AFL
Sbjct: 383 WNGLIADLMHNKADMCVTSLKLNSERARDIDFSLPFLDTGISIIVKIRSGVLSPT-AFLE 441
Query: 280 PFSPELWIAI-FTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKN-FSISSALWVMWGLLCG 337
PF W+ I F ++V AI++ ++EW+SP+ N ++ FS+ + W++W L
Sbjct: 442 PFEYSTWVIILFVCIHVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFS 501
Query: 338 HLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAA-LIAGLFF------HNAVDDFQG 390
V+ PKS ++ + VW F + F+A YTAN+AA +I + + H+ + +F
Sbjct: 502 ASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFMITRVQYYDLSGIHDPMLNFP- 560
Query: 391 GDNWLSLKVGTARSSVAEYYVQRN--NPHLAQQMRRYALQDIEEGIQRLRSDSISSVI 446
D + GT ++RN H + +Y +I GI+ ++++ + + I
Sbjct: 561 HDQKPPFRFGTVDGGNTHETMKRNWHKMHEYVKHNKYFRMNISAGIEAVKNEELDAFI 618
Score = 41.1 bits (92), Expect = 0.003
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 23/153 (15%)
Query: 8 NLVQGTDGNNIWRQVGQVEGRNVRLHTIVWPGGRF-VAHGHSDGARTIFRIVTALAPPFV 66
NL + G W +VG +++ + WPG + G +D + ++VT PPF+
Sbjct: 246 NLRTNSKGEKTWEKVGIFTNNELKMADVQWPGEKANPPQGAAD--KFHVKVVTLHEPPFI 303
Query: 67 MEGELDEDGQCLRGLLCHRPQTSDRDNLTLAFNELERXXXXXXXXXXXXXXXXXXXKMAT 126
++D D Q C Q S D + ++E +
Sbjct: 304 AVSDVDPDTQ-----KCPGNQGSICD-----WGDVE----------YTDGAGVKKNRTLL 343
Query: 127 HCCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
CC G +DLL +A ++ F + LY V D +G
Sbjct: 344 KCCSGYCVDLLNKLANDIGFTYTLYKVRDEKWG 376
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 109 bits (263), Expect = 6e-24
Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 13/238 (5%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
WNG++ DL+ A M +L ++S RA IDFS P+ +GIS++ P AFL
Sbjct: 383 WNGLIADLMHNKADMCVTSLKLNSERARDIDFSLPFLDTGISIIVKIRSGVLSPT-AFLE 441
Query: 280 PFSPELWIAI-FTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKN-FSISSALWVMWGLLCG 337
PF W+ I F ++V AI++ ++EW+SP+ N ++ FS+ + W++W L
Sbjct: 442 PFEYSTWVIILFVCIHVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFS 501
Query: 338 HLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAA-LIAGLFF------HNAVDDFQG 390
V+ PKS ++ + VW F + F+A YTAN+AA +I + + H+ + +F
Sbjct: 502 ASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFMITRVQYYDLSGIHDPMLNFP- 560
Query: 391 GDNWLSLKVGTARSSVAEYYVQRN--NPHLAQQMRRYALQDIEEGIQRLRSDSISSVI 446
D + GT ++RN H + +Y +I GI+ ++++ + + I
Sbjct: 561 HDQKPPFRFGTVDGGNTHETMKRNWHKMHEYVKHNKYFRMNISAGIEAVKNEELDAFI 618
Score = 41.1 bits (92), Expect = 0.003
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 23/153 (15%)
Query: 8 NLVQGTDGNNIWRQVGQVEGRNVRLHTIVWPGGRF-VAHGHSDGARTIFRIVTALAPPFV 66
NL + G W +VG +++ + WPG + G +D + ++VT PPF+
Sbjct: 246 NLRTNSKGEKTWEKVGIFTNNELKMADVQWPGEKANPPQGAAD--KFHVKVVTLHEPPFI 303
Query: 67 MEGELDEDGQCLRGLLCHRPQTSDRDNLTLAFNELERXXXXXXXXXXXXXXXXXXXKMAT 126
++D D Q C Q S D + ++E +
Sbjct: 304 AVSDVDPDTQ-----KCPGNQGSICD-----WGDVE----------YTDGAGVKKNRTLL 343
Query: 127 HCCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
CC G +DLL +A ++ F + LY V D +G
Sbjct: 344 KCCSGYCVDLLNKLANDIGFTYTLYKVRDEKWG 376
>AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic
glutamate receptor NMR-2 protein.
Length = 433
Score = 109 bits (263), Expect = 6e-24
Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 13/238 (5%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
WNG++ DL+ A M +L ++S RA IDFS P+ +GIS++ P AFL
Sbjct: 90 WNGLIADLMHNKADMCVTSLKLNSERARDIDFSLPFLDTGISIIVKIRSGVLSPT-AFLE 148
Query: 280 PFSPELWIAI-FTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKN-FSISSALWVMWGLLCG 337
PF W+ I F ++V AI++ ++EW+SP+ N ++ FS+ + W++W L
Sbjct: 149 PFEYSTWVIILFVCIHVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFS 208
Query: 338 HLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAA-LIAGLFF------HNAVDDFQG 390
V+ PKS ++ + VW F + F+A YTAN+AA +I + + H+ + +F
Sbjct: 209 ASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFMITRVQYYDLSGIHDPMLNFP- 267
Query: 391 GDNWLSLKVGTARSSVAEYYVQRN--NPHLAQQMRRYALQDIEEGIQRLRSDSISSVI 446
D + GT ++RN H + +Y +I GI+ ++++ + + I
Sbjct: 268 HDQKPPFRFGTVDGGNTHETMKRNWHKMHEYVKHNKYFRMNISAGIEAVKNEELDAFI 325
Score = 33.5 bits (73), Expect = 0.59
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 128 CCYGLAMDLLENIAQELEFDFHLYIVEDGAYG 159
CC G +DLL +A ++ F + LY V D +G
Sbjct: 52 CCSGYCVDLLNKLANDIGFTYTLYKVRDEKWG 83
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 100 bits (239), Expect = 5e-21
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 18/173 (10%)
Query: 221 NGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLLP 280
+GV+G+L A M+ ++++ R ++DF++P+ + GI +L N D P+ +FL P
Sbjct: 505 SGVIGELDGDTADMAIGGITINPERERIVDFTEPWLYHGIRIL-EKNIPRDSPMQSFLQP 563
Query: 281 FSPELWIAIFTSLNVTAIAVAIYEWLSPF----------------GLNPW-GRQRSKNFS 323
LW A+F S+ + +A+ ++ SPF W G+ +N +
Sbjct: 564 LQSSLWTALFISVILVGLAIYCLDFKSPFERFYQADKEMEQDLKKEFELWIGKDADENVN 623
Query: 324 ISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
A+W +WG+L V+ K P+S + L VW GF +I VASYTAN+AA +
Sbjct: 624 FGEAMWFVWGVLLNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFL 676
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 100 bits (239), Expect = 5e-21
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 18/173 (10%)
Query: 221 NGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLLP 280
+GV+G+L A M+ ++++ R ++DF++P+ + GI +L N D P+ +FL P
Sbjct: 505 SGVIGELDGDTADMAIGGITINPERERIVDFTEPWLYHGIRIL-EKNIPRDSPMQSFLQP 563
Query: 281 FSPELWIAIFTSLNVTAIAVAIYEWLSPF----------------GLNPW-GRQRSKNFS 323
LW A+F S+ + +A+ ++ SPF W G+ +N +
Sbjct: 564 LQSSLWTALFISVILVGLAIYCLDFKSPFERFYQADKEMEQDLKKEFELWIGKDADENVN 623
Query: 324 ISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
A+W +WG+L V+ K P+S + L VW GF +I VASYTAN+AA +
Sbjct: 624 FGEAMWFVWGVLLNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFL 676
>U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic
glutamate receptor subunitprotein.
Length = 962
Score = 96.3 bits (229), Expect = 7e-20
Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
W+G++G+L+SG AH A+L+++ R V+DFS+P+ +GIS++ + + + +F+
Sbjct: 529 WDGMIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKKPDKQEFSVFSFMQ 588
Query: 280 PFSPELWI-AIFTSLNVTAIAVAI-----YEWLSPFGLNPWGRQRSKNFSISSALWVMWG 333
P S E+W+ IF + V+ + + YEW + G S +FS+ + LW
Sbjct: 589 PLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWRVE-ETSRGGFTISNDFSVYNCLWFTLA 647
Query: 334 LLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGLFFHNAVDDFQGGDN 393
P+S + + W F++I V+SYTAN+AA + ++ +
Sbjct: 648 AFMQQGTDI-LPRSISGRIASSAWWFFTMIIVSSYTANLAAFLTLEKMQAPIESVEDLAK 706
Query: 394 WLSLKVGTARSSVAEYYVQRNNPHLAQQMRRYALQDI--------EEGIQRLRS 439
+K G + + ++ + Q+M RY + EGI+R+RS
Sbjct: 707 QSKIKYGIQGGGSTASFFKYSSVQIYQRMWRYMESQVPPVFVASYAEGIERVRS 760
>L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 1 protein.
Length = 962
Score = 96.3 bits (229), Expect = 7e-20
Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
W+G++G+L+SG AH A+L+++ R V+DFS+P+ +GIS++ + + + +F+
Sbjct: 529 WDGMIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKKPDKQEFSVFSFMQ 588
Query: 280 PFSPELWI-AIFTSLNVTAIAVAI-----YEWLSPFGLNPWGRQRSKNFSISSALWVMWG 333
P S E+W+ IF + V+ + + YEW + G S +FS+ + LW
Sbjct: 589 PLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWRVE-ETSRGGFTISNDFSVYNCLWFTLA 647
Query: 334 LLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGLFFHNAVDDFQGGDN 393
P+S + + W F++I V+SYTAN+AA + ++ +
Sbjct: 648 AFMQQGTDI-LPRSISGRIASSAWWFFTMIIVSSYTANLAAFLTLEKMQAPIESVEDLAK 706
Query: 394 WLSLKVGTARSSVAEYYVQRNNPHLAQQMRRYALQDI--------EEGIQRLRS 439
+K G + + ++ + Q+M RY + EGI+R+RS
Sbjct: 707 QSKIKYGIQGGGSTASFFKYSSVQIYQRMWRYMESQVPPVFVASYAEGIERVRS 760
>Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical
protein K10D3.1 protein.
Length = 836
Score = 95.5 bits (227), Expect = 1e-19
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 16/266 (6%)
Query: 198 ILQQTSEIPLISDDL--EDEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPY 255
IL+ T I + D+ E KW+G+VG+L G A ++ A+L++S R+EVIDF+ PY
Sbjct: 436 ILKFTYTIQKVRDNAYGSKESNGKWSGMVGELQRGDADLAVASLTISYGRSEVIDFTVPY 495
Query: 256 FFSGISVLAAPNQRPDIPLLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGL---- 311
GIS+L + D F+ P S ++WI F S V ++A+ I +SP+
Sbjct: 496 MHLGISILFKKPRIRDSDWFKFMDPLSTQVWIMTFASYFVVSVAIWIIAKISPYEQFERD 555
Query: 312 --NPWGRQRSKNFSISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYT 369
N + FS+ ++ W L + P++ + L +W F++I ++SYT
Sbjct: 556 EDNGQYKPVDNQFSLRNSFWFTVCSLM-QQGSELCPRAASTRLLTGIWWFFALILISSYT 614
Query: 370 ANIAALIAGLFFHNAVDDFQGGDNWLSLKVGT-ARSSVAEYYVQRNNPHLAQQMRRYALQ 428
AN+AA++ +++ +K GT R S ++ N + R + L
Sbjct: 615 ANLAAVLTTRRMETPIENADDLAAQTKIKYGTLGRGSTMSFF---NESKIETYERMWQLM 671
Query: 429 DIEEGIQRLRSDSISSVIAKYSSNGY 454
G L S IA+ S+ Y
Sbjct: 672 SSSPG---LFVQSSKEGIARVKSSDY 694
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGSRQ 162
G +DLL IA L+F + + V D AYGS++
Sbjct: 424 GYCIDLLHKIANILKFTYTIQKVRDNAYGSKE 455
>AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic
glutamate receptor GLR-3 protein.
Length = 398
Score = 95.5 bits (227), Expect = 1e-19
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 16/266 (6%)
Query: 198 ILQQTSEIPLISDDL--EDEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPY 255
IL+ T I + D+ E KW+G+VG+L G A ++ A+L++S R+EVIDF+ PY
Sbjct: 32 ILKFTYTIQKVRDNAYGSKESNGKWSGMVGELQRGDADLAVASLTISYGRSEVIDFTVPY 91
Query: 256 FFSGISVLAAPNQRPDIPLLAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGL---- 311
GIS+L + D F+ P S ++WI F S V ++A+ I +SP+
Sbjct: 92 MHLGISILFKKPRIRDSDWFKFMDPLSTQVWIMTFASYFVVSVAIWIIAKISPYEQFERD 151
Query: 312 --NPWGRQRSKNFSISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYT 369
N + FS+ ++ W L + P++ + L +W F++I ++SYT
Sbjct: 152 EDNGQYKPVDNQFSLRNSFWFTVCSLM-QQGSELCPRAASTRLLTGIWWFFALILISSYT 210
Query: 370 ANIAALIAGLFFHNAVDDFQGGDNWLSLKVGT-ARSSVAEYYVQRNNPHLAQQMRRYALQ 428
AN+AA++ +++ +K GT R S ++ N + R + L
Sbjct: 211 ANLAAVLTTRRMETPIENADDLAAQTKIKYGTLGRGSTMSFF---NESKIETYERMWQLM 267
Query: 429 DIEEGIQRLRSDSISSVIAKYSSNGY 454
G L S IA+ S+ Y
Sbjct: 268 SSSPG---LFVQSSKEGIARVKSSDY 290
Score = 31.9 bits (69), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGSRQ 162
G +DLL IA L+F + + V D AYGS++
Sbjct: 20 GYCIDLLHKIANILKFTYTIQKVRDNAYGSKE 51
>AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic
glutamate receptor GLR-6 protein.
Length = 396
Score = 88.6 bits (210), Expect = 1e-17
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 9/159 (5%)
Query: 219 KWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVL-AAPNQRPDIPLLAF 277
+W+G++G+++ G A M+ A ++V++ R EVIDF+ P+ GIS+L PN + L F
Sbjct: 60 EWDGMIGEILRGDADMAVAPITVTATRLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTRF 119
Query: 278 LLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKNFSISSALWVMWGLLCG 337
L P S +W + +TA+ V + LSP ++ + F I +++W + +L
Sbjct: 120 LWPLSASVWTFSAIATVITALLVTVAAVLSP-------KESTAEFKIQNSVWYLVCILLR 172
Query: 338 HLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
+ ++ + + VW F+++ +A YTAN AAL+
Sbjct: 173 AGSGYNC-QAGATRLISAVWWSFTLVLIAQYTANFAALL 210
Score = 34.7 bits (76), Expect = 0.26
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGSRQ 162
G +DLL+ +A+ L F++ L IV+D YG R+
Sbjct: 24 GFCVDLLDKLAEMLHFNYTLKIVKDNKYGERK 55
>AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform a protein.
Length = 844
Score = 88.6 bits (210), Expect = 1e-17
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 9/159 (5%)
Query: 219 KWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVL-AAPNQRPDIPLLAF 277
+W+G++G+++ G A M+ A ++V++ R EVIDF+ P+ GIS+L PN + L F
Sbjct: 472 EWDGMIGEILRGDADMAVAPITVTATRLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTRF 531
Query: 278 LLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKNFSISSALWVMWGLLCG 337
L P S +W + +TA+ V + LSP ++ + F I +++W + +L
Sbjct: 532 LWPLSASVWTFSAIATVITALLVTVAAVLSP-------KESTAEFKIQNSVWYLVCILLR 584
Query: 338 HLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
+ ++ + + VW F+++ +A YTAN AAL+
Sbjct: 585 AGSGYNC-QAGATRLISAVWWSFTLVLIAQYTANFAALL 622
Score = 34.7 bits (76), Expect = 0.26
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGSRQ 162
G +DLL+ +A+ L F++ L IV+D YG R+
Sbjct: 436 GFCVDLLDKLAEMLHFNYTLKIVKDNKYGERK 467
>U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 4 protein.
Length = 951
Score = 83.4 bits (197), Expect = 6e-16
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 15/218 (6%)
Query: 212 LEDEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISV-LAAPNQRP 270
+EDE +WNG++G L A +S +A++++ +RAEV+DF+ P+ GIS+ LA ++
Sbjct: 460 IEDESG-RWNGIIGALQRHEADLSLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEET 518
Query: 271 DI-PLLAFLLPFSPELWIAIFTSLNVTAIAVAI------YEWLSPFGLNPWGRQRSKN-- 321
D L FL P S +WI++ S + + ++ I YEW + ++ + KN
Sbjct: 519 DKGSLWTFLEPLSLTVWISLLISYCIVSYSMHILAKFSPYEWYNLERIDERDFENIKNQK 578
Query: 322 --FSISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGL 379
F++ ++ W G L + P++ + + VW F+ I ++SYTA +AA +
Sbjct: 579 NQFTVLNSFWFTMGSLM-QQGSDVIPRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVE 637
Query: 380 FFHNAVDDFQGGDNWLSLKVGTARS-SVAEYYVQRNNP 416
++ Q N ++ G +S S +++ + P
Sbjct: 638 RMSTPIESTQDLANQQKIRYGVLKSGSTMDFFRESKIP 675
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYG 159
G +DLL + Q L+F++ + V+DG YG
Sbjct: 431 GFCIDLLNEMTQVLKFNYTIIEVQDGTYG 459
>AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic
glutamate receptor GLR-4 protein.
Length = 409
Score = 83.4 bits (197), Expect = 6e-16
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 15/218 (6%)
Query: 212 LEDEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISV-LAAPNQRP 270
+EDE +WNG++G L A +S +A++++ +RAEV+DF+ P+ GIS+ LA ++
Sbjct: 49 IEDESG-RWNGIIGALQRHEADLSLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEET 107
Query: 271 DI-PLLAFLLPFSPELWIAIFTSLNVTAIAVAI------YEWLSPFGLNPWGRQRSKN-- 321
D L FL P S +WI++ S + + ++ I YEW + ++ + KN
Sbjct: 108 DKGSLWTFLEPLSLTVWISLLISYCIVSYSMHILAKFSPYEWYNLERIDERDFENIKNQK 167
Query: 322 --FSISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGL 379
F++ ++ W G L + P++ + + VW F+ I ++SYTA +AA +
Sbjct: 168 NQFTVLNSFWFTMGSLM-QQGSDVIPRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVE 226
Query: 380 FFHNAVDDFQGGDNWLSLKVGTARS-SVAEYYVQRNNP 416
++ Q N ++ G +S S +++ + P
Sbjct: 227 RMSTPIESTQDLANQQKIRYGVLKSGSTMDFFRESKIP 264
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYG 159
G +DLL + Q L+F++ + V+DG YG
Sbjct: 20 GFCIDLLNEMTQVLKFNYTIIEVQDGTYG 48
>U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 7 protein.
Length = 465
Score = 81.0 bits (191), Expect = 3e-15
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 215 EDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPL 274
+D WNG++G LVSG+A ++ A LSV + R +DF+ PY+ + + + L
Sbjct: 69 DDNGNWNGLIGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSL 128
Query: 275 LAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKN------FSISSAL 328
F+ +W+ I + T+I + I++ SP+ ++R +N FS+ L
Sbjct: 129 FKFMKVLEWPVWLCIVAAYLFTSILLWIFDRFSPYSFTN-NKERYQNDIEKRQFSLKECL 187
Query: 329 WVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGLFFHNAVDDF 388
W L +APK+ + + W F I +ASYTAN+AA + +
Sbjct: 188 WFCMTSLTPQ-GGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSL 246
Query: 389 QGGDNWLSLKVGTARSSVAEYYVQR 413
++ + S +E Y +R
Sbjct: 247 DDLAKQYKIEYAPIKGSASETYFRR 271
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGS 160
G +DL+ I E+ F + +Y VEDG++G+
Sbjct: 38 GYCIDLINMIQVEVNFTYTIYEVEDGSFGT 67
>AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic
glutamate receptor GLR-7 protein.
Length = 436
Score = 81.0 bits (191), Expect = 3e-15
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 215 EDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPL 274
+D WNG++G LVSG+A ++ A LSV + R +DF+ PY+ + + + L
Sbjct: 53 DDNGNWNGLIGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSL 112
Query: 275 LAFLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKN------FSISSAL 328
F+ +W+ I + T+I + I++ SP+ ++R +N FS+ L
Sbjct: 113 FKFMKVLEWPVWLCIVAAYLFTSILLWIFDRFSPYSFTN-NKERYQNDIEKRQFSLKECL 171
Query: 329 WVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGLFFHNAVDDF 388
W L +APK+ + + W F I +ASYTAN+AA + +
Sbjct: 172 WFCMTSLTPQ-GGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSL 230
Query: 389 QGGDNWLSLKVGTARSSVAEYYVQR 413
++ + S +E Y +R
Sbjct: 231 DDLAKQYKIEYAPIKGSASETYFRR 255
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGS 160
G +DL+ I E+ F + +Y VEDG++G+
Sbjct: 22 GYCIDLINMIQVEVNFTYTIYEVEDGSFGT 51
>U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform b protein.
Length = 977
Score = 78.2 bits (184), Expect = 2e-14
Identities = 38/161 (23%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
W+G++G L++ A ++ A L+++ R +DFS+P+ +GIS++ ++ + + +F+
Sbjct: 557 WDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFME 616
Query: 280 PFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQR----SKNFSISSALWVMWGLL 335
P +WI +S ++ + + W SP+ ++ + F++ ++LW
Sbjct: 617 PLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAAF 676
Query: 336 CGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
P++ + + W F++I V+SYTAN+AA +
Sbjct: 677 MQQGTDI-LPRAVSGRIASSCWWFFTLIIVSSYTANLAAFL 716
>U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform a protein.
Length = 908
Score = 78.2 bits (184), Expect = 2e-14
Identities = 38/161 (23%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
W+G++G L++ A ++ A L+++ R +DFS+P+ +GIS++ ++ + + +F+
Sbjct: 488 WDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFME 547
Query: 280 PFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQR----SKNFSISSALWVMWGLL 335
P +WI +S ++ + + W SP+ ++ + F++ ++LW
Sbjct: 548 PLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAAF 607
Query: 336 CGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
P++ + + W F++I V+SYTAN+AA +
Sbjct: 608 MQQGTDI-LPRAVSGRIASSCWWFFTLIIVSSYTANLAAFL 647
>AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA
ionotropic glutamate receptorsubunit GLR-2 protein.
Length = 977
Score = 78.2 bits (184), Expect = 2e-14
Identities = 38/161 (23%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLL 279
W+G++G L++ A ++ A L+++ R +DFS+P+ +GIS++ ++ + + +F+
Sbjct: 557 WDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFME 616
Query: 280 PFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQR----SKNFSISSALWVMWGLL 335
P +WI +S ++ + + W SP+ ++ + F++ ++LW
Sbjct: 617 PLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAAF 676
Query: 336 CGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
P++ + + W F++I V+SYTAN+AA +
Sbjct: 677 MQQGTDI-LPRAVSGRIASSCWWFFTLIIVSSYTANLAAFL 716
>U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 5 protein.
Length = 932
Score = 77.8 bits (183), Expect = 3e-14
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVL--AAPNQRPDIPLLAF 277
W+G++G+++ G A M+ A L+V+ R+E +DF++P+ GIS+L +Q+PD L +F
Sbjct: 504 WDGMMGEILRGEAEMAVAPLTVNYRRSEAVDFTKPFLSLGISILYKVPDDQQPD--LFSF 561
Query: 278 LLPFSPELWIAIFTSLNVTAIA------VAIYEW--------------LSPFGLNPWGR- 316
L P S ++W AI TS+ + V YEW + F N
Sbjct: 562 LNPLSWQIWTAIATSIITVTLGMYFVANVTPYEWNLNFSCCTAHEPHPAAAFATNQEAPI 621
Query: 317 QRSKNFSISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
S N+S + +W + + F P++ + L W F ++ +++YTAN+AA++
Sbjct: 622 VMSNNYSFWNTVWYVLSTMLKGGCDF-GPRAVSTRLLGGTWWVFYLVIISAYTANLAAVL 680
Query: 377 AGLFFHNAVDDFQGGDNWLSLKVGTARSSVAEYYVQRNNPHLAQQMRRY 425
+ + + N ++ GT R + Q + +M +Y
Sbjct: 681 TVSRPYIPIKNLDDLANQTTISYGTIRGGSTMQFFQESRIAAHVKMWQY 729
Score = 31.1 bits (67), Expect = 3.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGS 160
G +DLL ++++L F + ++ V+DG YG+
Sbjct: 467 GFCIDLLAELSKDLGFTYTIHAVKDGKYGN 496
>AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic
glutamate receptor GLR-5 protein.
Length = 425
Score = 77.8 bits (183), Expect = 3e-14
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVL--AAPNQRPDIPLLAF 277
W+G++G+++ G A M+ A L+V+ R+E +DF++P+ GIS+L +Q+PD L +F
Sbjct: 64 WDGMMGEILRGEAEMAVAPLTVNYRRSEAVDFTKPFLSLGISILYKVPDDQQPD--LFSF 121
Query: 278 LLPFSPELWIAIFTSLNVTAIA------VAIYEW--------------LSPFGLNPWGR- 316
L P S ++W AI TS+ + V YEW + F N
Sbjct: 122 LNPLSWQIWTAIATSIITVTLGMYFVANVTPYEWNLNFSCCTAHEPHPAAAFATNQEAPI 181
Query: 317 QRSKNFSISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
S N+S + +W + + F P++ + L W F ++ +++YTAN+AA++
Sbjct: 182 VMSNNYSFWNTVWYVLSTMLKGGCDF-GPRAVSTRLLGGTWWVFYLVIISAYTANLAAVL 240
Query: 377 AGLFFHNAVDDFQGGDNWLSLKVGTARSSVAEYYVQRNNPHLAQQMRRY 425
+ + + N ++ GT R + Q + +M +Y
Sbjct: 241 TVSRPYIPIKNLDDLANQTTISYGTIRGGSTMQFFQESRIAAHVKMWQY 289
Score = 31.1 bits (67), Expect = 3.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 131 GLAMDLLENIAQELEFDFHLYIVEDGAYGS 160
G +DLL ++++L F + ++ V+DG YG+
Sbjct: 27 GFCIDLLAELSKDLGFTYTIHAVKDGKYGN 56
>U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 8 protein.
Length = 489
Score = 49.6 bits (113), Expect = 8e-06
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLA-APNQRPDIPLLAFL 278
W G G LV G + + R+ + D + P+ F ++ +P + D LL
Sbjct: 71 WTGAFGQLVRGEVDLLAGGAIMEYDRSVIADLTYPFQFEPTGIMIRSPEKYEDDTLLIVT 130
Query: 279 LPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKNFSISSALWVMWGLLCGH 338
PFS E+W+ + V I+ I+ ++ + F ++WV + +
Sbjct: 131 EPFSWEVWV---ITAAVILISGVIFLVMTNIIRKVYEEMTVTPF---ESIWVFFSIFVQQ 184
Query: 339 LVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIA 377
+ + P+SW + L+ +W S+ A++T ++ AL A
Sbjct: 185 GLP-EQPRSWSCRVLVALWWLASITLSATFTGSLVALFA 222
>AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic
glutamate receptor GLR-8 protein.
Length = 406
Score = 49.6 bits (113), Expect = 8e-06
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLA-APNQRPDIPLLAFL 278
W G G LV G + + R+ + D + P+ F ++ +P + D LL
Sbjct: 63 WTGAFGQLVRGEVDLLAGGAIMEYDRSVIADLTYPFQFEPTGIMIRSPEKYEDDTLLIVT 122
Query: 279 LPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKNFSISSALWVMWGLLCGH 338
PFS E+W+ + V I+ I+ ++ + F ++WV + +
Sbjct: 123 EPFSWEVWV---ITAAVILISGVIFLVMTNIIRKVYEEMTVTPF---ESIWVFFSIFVQQ 176
Query: 339 LVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIA 377
+ + P+SW + L+ +W S+ A++T ++ AL A
Sbjct: 177 GLP-EQPRSWSCRVLVALWWLASITLSATFTGSLVALFA 214
>AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical
protein F59E12.8 protein.
Length = 412
Score = 37.1 bits (82), Expect = 0.048
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 223 VVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGISVLAAPNQRPDIPLLAFLLPFS 282
++GD+ G M+ +++ RA V+ F+ P F V + + + ++ PFS
Sbjct: 1 MLGDIQKGRIDMACGRFRMTADRANVLTFTYPTQFEVNQVYLITDPQKSVDVVFLFHPFS 60
Query: 283 PELWIAIFTSLNVTAIAVAIY 303
+W+ + SL V +A+ +
Sbjct: 61 TTVWLLL--SLTVLVVAIVFF 79
>AC006637-6|AAM54177.1| 328|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform b protein.
Length = 328
Score = 37.1 bits (82), Expect = 0.048
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 285 LWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKNFSISSALWVMWGLLCGHLVAFKA 344
+W + +TA+ V + LSP ++ + F I +++W + +L +
Sbjct: 23 VWTFSAIATVITALLVTVAAVLSP-------KESTAEFKIQNSVWYLVCILLRAGSGYNC 75
Query: 345 PKSWPNKFLINVWGGFSVIFVASYTANIAALI 376
++ + + VW F+++ +A YTAN AAL+
Sbjct: 76 -QAGATRLISAVWWSFTLVLIAQYTANFAALL 106
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 33.9 bits (74), Expect = 0.45
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 667 LTNSPPDLNTRLRTPSPMIRRTEASSTRSYQDVSLRSENYVSTDAPTSRA 716
LTNS ++R IRR+ ++ST + QDV L SE + P+ RA
Sbjct: 171 LTNSYRCAKKKIRATFHAIRRSRSNSTATLQDVVLTSEGIRTVTTPSRRA 220
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 33.9 bits (74), Expect = 0.45
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 667 LTNSPPDLNTRLRTPSPMIRRTEASSTRSYQDVSLRSENYVSTDAPTSRA 716
LTNS ++R IRR+ ++ST + QDV L SE + P+ RA
Sbjct: 171 LTNSYRCAKKKIRATFHAIRRSRSNSTATLQDVVLTSEGIRTVTTPSRRA 220
>AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical
protein C09D4.4c protein.
Length = 916
Score = 33.5 bits (73), Expect = 0.59
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 10/120 (8%)
Query: 592 KFLSPSPDTSHRSPRQGRSPRQLRSPKGRRKRCSLAGLNVRRFSTDSV--LGSDSVSNIY 649
+F PS DT+ SP P SP RCS AG F D + + +SV++
Sbjct: 476 EFPGPSRDTATESPSCSSEPIASPSPSSEFGRCSAAG---ELFQDDGIPLISKESVTS-- 530
Query: 650 ERTCHNIGRRLSRD--VSCLTNSPPDLNTRLRTPSPMIRRTEASSTRSYQDVSLRSE-NY 706
E + + +S D +SC S D+ P + E R LR + NY
Sbjct: 531 EEIANALRTSVSADDVLSCRVTSSTDMKLTEEHPKDRMAEFELLREREAAKKMLRQQTNY 590
>AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical
protein C09D4.4b protein.
Length = 915
Score = 33.5 bits (73), Expect = 0.59
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 10/120 (8%)
Query: 592 KFLSPSPDTSHRSPRQGRSPRQLRSPKGRRKRCSLAGLNVRRFSTDSV--LGSDSVSNIY 649
+F PS DT+ SP P SP RCS AG F D + + +SV++
Sbjct: 475 EFPGPSRDTATESPSCSSEPIASPSPSSEFGRCSAAG---ELFQDDGIPLISKESVTS-- 529
Query: 650 ERTCHNIGRRLSRD--VSCLTNSPPDLNTRLRTPSPMIRRTEASSTRSYQDVSLRSE-NY 706
E + + +S D +SC S D+ P + E R LR + NY
Sbjct: 530 EEIANALRTSVSADDVLSCRVTSSTDMKLTEEHPKDRMAEFELLREREAAKKMLRQQTNY 589
>AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical
protein C09D4.4a protein.
Length = 913
Score = 33.5 bits (73), Expect = 0.59
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 10/120 (8%)
Query: 592 KFLSPSPDTSHRSPRQGRSPRQLRSPKGRRKRCSLAGLNVRRFSTDSV--LGSDSVSNIY 649
+F PS DT+ SP P SP RCS AG F D + + +SV++
Sbjct: 473 EFPGPSRDTATESPSCSSEPIASPSPSSEFGRCSAAG---ELFQDDGIPLISKESVTS-- 527
Query: 650 ERTCHNIGRRLSRD--VSCLTNSPPDLNTRLRTPSPMIRRTEASSTRSYQDVSLRSE-NY 706
E + + +S D +SC S D+ P + E R LR + NY
Sbjct: 528 EEIANALRTSVSADDVLSCRVTSSTDMKLTEEHPKDRMAEFELLREREAAKKMLRQQTNY 587
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 33.1 bits (72), Expect = 0.78
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 151 YIVEDGAYGSRQL-VKTFRSFHEYTRPTDKYMTLHDEN--YRSQYRNDYTILQQTSEIPL 207
Y + G +++ +K +RS H PTD+ L + R+ + + +SEI
Sbjct: 118 YDFSEQKLGQKEIAIKEYRSGHMSLTPTDRVQLLSERRLVVRNLMHSYKVVGLLSSEISG 177
Query: 208 ISDDLEDEDVMKWNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYFFSGIS 261
I + E ++++K N ++ H+ A +S+S R E ++ F+ ++
Sbjct: 178 IEESKEPDEILK-NALIELAAIVTQHIQKAEISLSDLRTEQARINKSIVFNTVT 230
>AF016445-1|AAC69057.2| 367|Caenorhabditis elegans Serpentine
receptor, class w protein132 protein.
Length = 367
Score = 32.7 bits (71), Expect = 1.0
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 320 KNFSISSALWVMWGLLCGHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGL 379
K ++ + W+++ ++ + + P S N+ L N FSVIF S T + ++I
Sbjct: 121 KEYARRCSTWLLFSIVTIRTLVIRNPMSHKNEKLSNSSASFSVIFGVSGTCTLFSII--Y 178
Query: 380 FFHNAV 385
FF N +
Sbjct: 179 FFENKI 184
>Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.9 bits (69), Expect = 1.8
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 603 RSPRQ---GRSPRQLRSPKGRRKRCSLAGLNVRRFSTDSVLGSDSVSNIYERTCHNIGRR 659
RSPR+ RSP + RSP RR+ + + S SD + ++ G R
Sbjct: 192 RSPRRRSRSRSPTRSRSPPARRRSPGSDRSDRKSRSASPKKRSDKRARSESKSRSRSGGR 251
Query: 660 LSRDVSCLTNSPPDLNTRLRTPSPMIRRTEASSTRS 695
SR +NSPP+ R+PSP RR + SS RS
Sbjct: 252 RSR-----SNSPPN-----RSPSPKKRR-DNSSPRS 276
>Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical
protein W02A2.5 protein.
Length = 487
Score = 31.5 bits (68), Expect = 2.4
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 220 WNGVVGDLVSGAAHMSFAALSVSSARAEVIDFSQPYF-FSGISVLAAPNQRPDIPLLAFL 278
W+GV+G L +G A + R E ++S P + V + L
Sbjct: 78 WSGVLGYLQNGTADAVALMYQKTDTRNEYFEYSYPVTNVQPVFVARKKTETLGSVLWNAF 137
Query: 279 LPFSPELWIAIFTSL 293
PFS E+W+ + SL
Sbjct: 138 KPFSVEVWLCLLASL 152
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.7 bits (66), Expect = 4.2
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 597 SPDTSHRSPRQGRSPRQLRSPKGRRKRCSLAGLNVRRFSTDSVLGSDSVSNIYERTCHNI 656
S S +PR+ RSP Q +SP RR+R R S GS S S R+
Sbjct: 429 SRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPR-RRRSPSGSKSRSPRRRRSPAAA 487
Query: 657 GRRL---SRDVSCLTNSPPDLNTRLRTPSPMIRRTEASS 692
RR R S P ++R R+P P RR S
Sbjct: 488 PRRRQSPQRRRSPRRRRSPSSSSRSRSPPPPPRRPRQDS 526
>AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical
protein ZK185.5 protein.
Length = 352
Score = 30.7 bits (66), Expect = 4.2
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 516 LPILRHQPKGTIWRSRNIMFFSQKEHEQRRRRKSKAQLYEMIQAIRRVQQRDHSL 570
LP++ + + + NI FF E+ RR+KSK + Y ++ + ++ + D L
Sbjct: 7 LPLISRKSPVKYYHNENISFF-----EKMRRQKSKKEYYSRLEKLNQLYEEDDKL 56
>Z54270-5|CAA91031.1| 1302|Caenorhabditis elegans Hypothetical
protein F11C1.5b protein.
Length = 1302
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 135 DLLENIAQELEFDFHLYIVEDGAYGSRQLVKTFRSFHEYTRPTDKYMTLH 184
++LE++A++++ HL ++ + G +L T R H RP +YM LH
Sbjct: 654 EILEDMARDMKLGSHLLLIGNQGVGKNKL--TDRFLHLINRPR-QYMQLH 700
>Z54270-4|CAA91030.1| 1767|Caenorhabditis elegans Hypothetical
protein F11C1.5a protein.
Length = 1767
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 135 DLLENIAQELEFDFHLYIVEDGAYGSRQLVKTFRSFHEYTRPTDKYMTLH 184
++LE++A++++ HL ++ + G +L T R H RP +YM LH
Sbjct: 654 EILEDMARDMKLGSHLLLIGNQGVGKNKL--TDRFLHLINRPR-QYMQLH 700
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 161 RQLVK-TFRSFHEYTRPTDKYMTLHDENYRSQYRNDYTILQQTSEIPLI-------SDDL 212
R+L K +++YTRP Y ++ + + Q N + +Q +I ++ DD
Sbjct: 37 RELAKHLLDDYYQYTRPVRNYSSVLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDY 96
Query: 213 EDEDVMKWNGV 223
D +WNG+
Sbjct: 97 LTWDPKEWNGI 107
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 161 RQLVK-TFRSFHEYTRPTDKYMTLHDENYRSQYRNDYTILQQTSEIPLI-------SDDL 212
R+L K +++YTRP Y ++ + + Q N + +Q +I ++ DD
Sbjct: 37 RELAKHLLDDYYQYTRPVRNYSSVLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDY 96
Query: 213 EDEDVMKWNGV 223
D +WNG+
Sbjct: 97 LTWDPKEWNGI 107
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,400,163
Number of Sequences: 27539
Number of extensions: 696226
Number of successful extensions: 1928
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1826
Number of HSP's gapped (non-prelim): 83
length of query: 787
length of database: 12,573,161
effective HSP length: 87
effective length of query: 700
effective length of database: 10,177,268
effective search space: 7124087600
effective search space used: 7124087600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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