Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000400-TA|BGIBMGA000400-PA|undefined
(265 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 32 0.37
Z69646-6|CAD44142.1| 287|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z69646-5|CAA93474.1| 288|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical p... 31 1.1
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 31 1.1
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 30 1.5
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 30 2.0
Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81492-10|CAB04029.2| 322|Caenorhabditis elegans Hypothetical p... 28 7.9
Z81133-4|CAI70414.1| 199|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 142 NINDKTQFVEDDIAEFENMKDGSENFAKDSFVRNKRNDVDNNTVKYSTD 190
+ N + F DD EF + D +N D VRN+ +D DN T+++ D
Sbjct: 1540 DFNKENTFDYDDEDEFAGIAD--DNVTDDVTVRNEVDDSDNETIRHIDD 1586
>Z69646-6|CAD44142.1| 287|Caenorhabditis elegans Hypothetical
protein F57C7.3b protein.
Length = 287
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 144 NDKTQFVEDDIAEFENMKDGSENFAKDSFVRNKRNDVDNNTVKYSTDYRPPVM 196
NDK VE+D + E+ + E+ +D N ND D T +T YRP V+
Sbjct: 134 NDKEIKVEEDEDDDEDEDEDDEDDEEDFADENIHNDEDFFTTTTTTTYRPIVV 186
>Z69646-5|CAA93474.1| 288|Caenorhabditis elegans Hypothetical
protein F57C7.3a protein.
Length = 288
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 144 NDKTQFVEDDIAEFENMKDGSENFAKDSFVRNKRNDVDNNTVKYSTDYRPPVM 196
NDK VE+D + E+ + E+ +D N ND D T +T YRP V+
Sbjct: 135 NDKEIKVEEDEDDDEDEDEDDEDDEEDFADENIHNDEDFFTTTTTTTYRPIVV 187
>Z81147-11|CAL69739.1| 323|Caenorhabditis elegans Hypothetical
protein T09E11.12 protein.
Length = 323
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 126 FFWLWIDASKDFDVFHNINDKTQFVEDDIAEFENMKDGSE 165
F++ ++ SK FD + +D T F D + E+ N D S+
Sbjct: 146 FYYSYVHISKSFDWYLKADDDTYFAMDHLREYLNTLDPSK 185
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 147 TQFVEDDIAEFENMKDGSENFAKDSFVRNKR-NDVDNNTVKYSTDYRPPVMVMDKISNIA 205
TQ+++ I + +N K+G+ + S V R ND++ ++Y+ Y P M+ + N++
Sbjct: 122 TQYIDKTI-DLDNSKNGTNVDEEQSNVLKLRENDLNREMLRYANRYHPSTML--AMGNLS 178
Query: 206 VN 207
+N
Sbjct: 179 IN 180
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 147 TQFVEDDIAEFENMKDGSENFAKDSFVRNKR-NDVDNNTVKYSTDYRPPVMVMDKISNIA 205
TQ+++ I + +N K+G+ + S V R ND++ ++Y+ Y P M+ + N++
Sbjct: 1501 TQYIDKTI-DLDNSKNGTNVDEEQSNVLKLRENDLNREMLRYANRYHPSTML--AMGNLS 1557
Query: 206 VN 207
+N
Sbjct: 1558 IN 1559
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 139 VFHNINDKTQFVEDDIAEFENMKDGSENFAKDSFVRNKR 177
VFH +D FVED E KD S A+ F R ++
Sbjct: 25 VFHIYSDINSFVEDSHRELGEFKDDSVRMARSVFGRRRQ 63
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical
protein F18C12.2b protein.
Length = 2271
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 QFVEDDIAEFENMKDGSENFAK-DSFVRNKRNDVDNNTVKYSTDYRPPVM 196
Q++ +D + +++G N +K D + + RN NN +++S+DY ++
Sbjct: 49 QWLYEDFLSVKPLRNGGSNDSKQDEYKIHVRNRGKNNDMRFSSDYTTDIL 98
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical
protein F18C12.2a protein.
Length = 2279
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 QFVEDDIAEFENMKDGSENFAK-DSFVRNKRNDVDNNTVKYSTDYRPPVM 196
Q++ +D + +++G N +K D + + RN NN +++S+DY ++
Sbjct: 49 QWLYEDFLSVKPLRNGGSNDSKQDEYKIHVRNRGKNNDMRFSSDYTTDIL 98
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 148 QFVEDDIAEFENMKDGSENFAK-DSFVRNKRNDVDNNTVKYSTDYRPPVM 196
Q++ +D + +++G N +K D + + RN NN +++S+DY ++
Sbjct: 49 QWLYEDFLSVKPLRNGGSNDSKQDEYKIHVRNRGKNNDMRFSSDYTTDIL 98
>Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical
protein F45H11.3 protein.
Length = 738
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 144 NDKTQFVEDDIAEFENMKDGSENFAKDSFVRNKRNDVDNNTVKYSTDYRPPVMVMDKI 201
+++ VED+ + E + E + +D +D ++ TDY P++V DKI
Sbjct: 154 DEEVSHVEDENCDSEEISQDEEEY-EDEEGEEYDDDDESRIAPILTDYTAPMIVSDKI 210
>Z81492-10|CAB04029.2| 322|Caenorhabditis elegans Hypothetical
protein E03H4.3 protein.
Length = 322
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 126 FFWLWIDASKDFDVFHNINDKTQFVEDDIAEFENMKDGSE 165
F++ ++ S FD + +D T F D + E+ N D S+
Sbjct: 146 FYYSYMHISNSFDWYLKADDDTYFAMDHLREYLNTLDPSK 185
>Z81133-4|CAI70414.1| 199|Caenorhabditis elegans Hypothetical
protein T28B8.6 protein.
Length = 199
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 158 ENMKDGSENFAKD--SFVRNKR---NDVDNNTVKYSTD--YRPPVMVMDKISNIAVNLNR 210
EN++ GSE + S + +R N TV Y Y+P V+V++K + LN
Sbjct: 46 ENLQQGSEEEKAELPSVLLQRRLLGKRYSNGTVIYDNKVKYKPIVVVINKRGRSTLYLNY 105
Query: 211 VYIRAAVRLMVGAL 224
+Y+ A + G L
Sbjct: 106 LYVSIAFLVAAGLL 119
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,555,176
Number of Sequences: 27539
Number of extensions: 206106
Number of successful extensions: 804
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 796
Number of HSP's gapped (non-prelim): 16
length of query: 265
length of database: 12,573,161
effective HSP length: 80
effective length of query: 185
effective length of database: 10,370,041
effective search space: 1918457585
effective search space used: 1918457585
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)
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