Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000399-TA|BGIBMGA000399-PA|IPR005812|Ribosomal protein
L20, bacterial and organelle form, IPR005813|Ribosomal protein L20
(159 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC059945-1|AAH59945.1| 149|Homo sapiens MRPL20 protein protein. 113 3e-25
BC014316-1|AAH14316.1| 149|Homo sapiens mitochondrial ribosomal... 113 3e-25
BC009515-1|AAH09515.1| 149|Homo sapiens mitochondrial ribosomal... 113 3e-25
AL391244-3|CAI22658.1| 149|Homo sapiens mitochondrial ribosomal... 113 3e-25
AB049644-1|BAB40849.1| 149|Homo sapiens mitochondrial ribosomal... 113 3e-25
AK000886-1|BAA91406.1| 148|Homo sapiens protein ( Homo sapiens ... 65 1e-10
AJ505966-1|CAD44543.1| 171|Homo sapiens polypeptide N-acetylgal... 30 4.2
Z82022-1|CAB04787.1| 400|Homo sapiens GlcNac-1-P transferase pr... 29 7.3
BT006802-1|AAP35448.1| 408|Homo sapiens dolichyl-phosphate (UDP... 29 7.3
BC047771-1|AAH47771.1| 301|Homo sapiens dolichyl-phosphate (UDP... 29 7.3
BC000325-1|AAH00325.1| 408|Homo sapiens dolichyl-phosphate (UDP... 29 7.3
AF070443-1|AAG43168.1| 408|Homo sapiens GlcNAc-1-P transferase ... 29 7.3
>BC059945-1|AAH59945.1| 149|Homo sapiens MRPL20 protein protein.
Length = 149
Score = 113 bits (271), Expect = 3e-25
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 1 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 60
MVFL+ W R R D ++R + V + A H+ GR+ CY +AVR V RA V TKAR LK
Sbjct: 1 MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLK 60
Query: 61 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 120
K++M++LW RITAA ++H + +L L + + L+RK L+DLA +EPKTF++LAA+A
Sbjct: 61 KKNMRTLWINRITAASQEHGLKYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSLAALA 120
>BC014316-1|AAH14316.1| 149|Homo sapiens mitochondrial ribosomal
protein L20 protein.
Length = 149
Score = 113 bits (271), Expect = 3e-25
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 1 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 60
MVFL+ W R R D ++R + V + A H+ GR+ CY +AVR V RA V TKAR LK
Sbjct: 1 MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLK 60
Query: 61 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 120
K++M++LW RITAA ++H + +L L + + L+RK L+DLA +EPKTF++LAA+A
Sbjct: 61 KKNMRTLWINRITAASQEHGLKYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSLAALA 120
>BC009515-1|AAH09515.1| 149|Homo sapiens mitochondrial ribosomal
protein L20 protein.
Length = 149
Score = 113 bits (271), Expect = 3e-25
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 1 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 60
MVFL+ W R R D ++R + V + A H+ GR+ CY +AVR V RA V TKAR LK
Sbjct: 1 MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLK 60
Query: 61 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 120
K++M++LW RITAA ++H + +L L + + L+RK L+DLA +EPKTF++LAA+A
Sbjct: 61 KKNMRTLWINRITAASQEHGLKYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSLAALA 120
>AL391244-3|CAI22658.1| 149|Homo sapiens mitochondrial ribosomal
protein L20 protein.
Length = 149
Score = 113 bits (271), Expect = 3e-25
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 1 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 60
MVFL+ W R R D ++R + V + A H+ GR+ CY +AVR V RA V TKAR LK
Sbjct: 1 MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLK 60
Query: 61 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 120
K++M++LW RITAA ++H + +L L + + L+RK L+DLA +EPKTF++LAA+A
Sbjct: 61 KKNMRTLWINRITAASQEHGLKYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSLAALA 120
>AB049644-1|BAB40849.1| 149|Homo sapiens mitochondrial ribosomal
protein L20 (L20mt) protein.
Length = 149
Score = 113 bits (271), Expect = 3e-25
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 1 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 60
MVFL+ W R R D ++R + V + A H+ GR+ CY +AVR V RA V TKAR LK
Sbjct: 1 MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLK 60
Query: 61 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 120
K++M++LW RITAA ++H + +L L + + L+RK L+DLA +EPKTF++LAA+A
Sbjct: 61 KKNMRTLWINRITAASQEHGLKYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSLAALA 120
>AK000886-1|BAA91406.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ10024 fis, clone HEMBA1000636. ).
Length = 148
Score = 64.9 bits (151), Expect = 1e-10
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 1 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 60
MVFL+ W R R D ++R + V + A H+ GR+ CY +AVR V RA V TKAR LK
Sbjct: 1 MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFWGRKNRCYRLAVRTVIRAFVKCTKARYLK 60
Query: 61 KEDMKSL 67
K++M+++
Sbjct: 61 KKNMRTV 67
>AJ505966-1|CAD44543.1| 171|Homo sapiens polypeptide
N-acetylgalactosaminyltransferase 15 protein.
Length = 171
Score = 29.9 bits (64), Expect = 4.2
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 58 KLKKEDMKS-LWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEAL 116
K+K ED KS +W T Q + L + +++ K+ D W KT +
Sbjct: 70 KVKGEDAKSQVWAFTYTQKILQEELCLSVITLFPGAPVVLVLCKNGDDRQQWT-KTGSHI 128
Query: 117 AAVAKYK-LETDRFIDGQDKCHPTGINLNLKDVMLEAW 153
+A + L+TD F DG + G+N +M + W
Sbjct: 129 EHIASHLCLDTDMFGDGTENGKEIGVNPCESSLMSQHW 166
>Z82022-1|CAB04787.1| 400|Homo sapiens GlcNac-1-P transferase
protein.
Length = 400
Score = 29.1 bits (62), Expect = 7.3
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 76 CEQHNITLFSLREG-LDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDRFIDGQ- 133
C +H I +++ G L+ + KSLS L ++ K E+L V ++ ET+ DG+
Sbjct: 291 CPRHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETE---DGEF 347
Query: 134 DKC-HPTGINLNLK 146
+C + T INL LK
Sbjct: 348 TECNNMTLINLLLK 361
>BT006802-1|AAP35448.1| 408|Homo sapiens dolichyl-phosphate
(UDP-N-acetylglucosamine)
N-acetylglucosaminephosphotransfer protein.
Length = 408
Score = 29.1 bits (62), Expect = 7.3
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 76 CEQHNITLFSLREG-LDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDRFIDGQ- 133
C +H I +++ G L+ + KSLS L ++ K E+L V ++ ET+ DG+
Sbjct: 299 CPRHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETE---DGEF 355
Query: 134 DKC-HPTGINLNLK 146
+C + T INL LK
Sbjct: 356 TECNNMTLINLLLK 369
>BC047771-1|AAH47771.1| 301|Homo sapiens dolichyl-phosphate
(UDP-N-acetylglucosamine)
N-acetylglucosaminephosphotransfer protein.
Length = 301
Score = 29.1 bits (62), Expect = 7.3
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 76 CEQHNITLFSLREG-LDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDRFIDGQ- 133
C +H I +++ G L+ + KSLS L ++ K E+L V ++ ET+ DG+
Sbjct: 192 CPRHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETE---DGEF 248
Query: 134 DKC-HPTGINLNLK 146
+C + T INL LK
Sbjct: 249 TECNNMTLINLLLK 262
>BC000325-1|AAH00325.1| 408|Homo sapiens dolichyl-phosphate
(UDP-N-acetylglucosamine)
N-acetylglucosaminephosphotransfer protein.
Length = 408
Score = 29.1 bits (62), Expect = 7.3
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 76 CEQHNITLFSLREG-LDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDRFIDGQ- 133
C +H I +++ G L+ + KSLS L ++ K E+L V ++ ET+ DG+
Sbjct: 299 CPRHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETE---DGEF 355
Query: 134 DKC-HPTGINLNLK 146
+C + T INL LK
Sbjct: 356 TECNNMTLINLLLK 369
>AF070443-1|AAG43168.1| 408|Homo sapiens GlcNAc-1-P transferase
protein.
Length = 408
Score = 29.1 bits (62), Expect = 7.3
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 76 CEQHNITLFSLREG-LDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDRFIDGQ- 133
C +H I +++ G L+ + KSLS L ++ K E+L V ++ ET+ DG+
Sbjct: 299 CPRHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETE---DGEF 355
Query: 134 DKC-HPTGINLNLK 146
+C + T INL LK
Sbjct: 356 TECNNMTLINLLLK 369
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.135 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,054,536
Number of Sequences: 224733
Number of extensions: 734716
Number of successful extensions: 1600
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1594
Number of HSP's gapped (non-prelim): 12
length of query: 159
length of database: 73,234,838
effective HSP length: 84
effective length of query: 75
effective length of database: 54,357,266
effective search space: 4076794950
effective search space used: 4076794950
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)
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