GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000399-TA|BGIBMGA000399-PA|IPR005812|Ribosomal protein
L20, bacterial and organelle form, IPR005813|Ribosomal protein L20
         (159 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   0.86 
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    25   0.86 
DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.       23   3.5  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    22   8.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   8.0  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 0.86
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 3   FLSVINWARCRGPDEFWR 20
           +LS I    CR PD FWR
Sbjct: 455 YLSKIQRNLCRWPDSFWR 472


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 25.4 bits (53), Expect = 0.86
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 90  LDRANIMLDRKSLSDLASWEP-KTFEALAAVAKYKLETDRFIDGQDKCHPTGINLNLKDV 148
           + R N +L   +L    SW P   F   A +  + +  D  +     CH  G++    + 
Sbjct: 268 MQRTNYLLISIALIFGVSWLPLNLFNLFADLYVHSITQDIMV-AYAICHMAGMSSACSNP 326

Query: 149 MLEAWLNE 156
           +L  WLN+
Sbjct: 327 LLYGWLND 334


>DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.
          Length = 55

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 26 RLAAHYIGRRRNCY 39
          R  +H +GR+R CY
Sbjct: 12 RRTSHLVGRKRTCY 25


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 101 SLSDLASWEPKTFEALAAVAKYKLETDRFIDG 132
           S+S  +   P T    A + KY+ +T R   G
Sbjct: 460 SISSSSKLHPTTVHVTAVLVKYETKTGRLNKG 491


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)

Query: 47   HRALVYATKARKLKKED 63
            HR+LV ATK RK ++ +
Sbjct: 1795 HRSLVTATKTRKKQQTE 1811


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.135    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,711
Number of Sequences: 2123
Number of extensions: 5202
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 5
length of query: 159
length of database: 516,269
effective HSP length: 59
effective length of query: 100
effective length of database: 391,012
effective search space: 39101200
effective search space used: 39101200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)