Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000399-TA|BGIBMGA000399-PA|IPR005812|Ribosomal protein
L20, bacterial and organelle form, IPR005813|Ribosomal protein L20
(159 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2230|AAF49855.1| 150|Drosophila melanogaster CG11258-P... 160 7e-40
AY119610-1|AAM50264.1| 825|Drosophila melanogaster LD34829p pro... 28 6.8
AY071152-1|AAL48774.1| 485|Drosophila melanogaster RE18294p pro... 28 6.8
AF364400-1|AAK50050.1| 481|Drosophila melanogaster neuropeptide... 28 6.8
AE014297-411|AAF51909.3| 485|Drosophila melanogaster CG1147-PA ... 28 6.8
AE013599-2414|AAM68495.2| 810|Drosophila melanogaster CG6967-PB... 28 6.8
AE013599-2413|AAF57908.2| 825|Drosophila melanogaster CG6967-PA... 28 6.8
BT003633-1|AAO39637.1| 359|Drosophila melanogaster AT24863p pro... 27 9.0
AY060905-1|AAL28453.1| 556|Drosophila melanogaster GM05229p pro... 27 9.0
AE013599-2185|AAM70948.2| 556|Drosophila melanogaster CG8421-PE... 27 9.0
AE013599-2184|AAF58064.2| 556|Drosophila melanogaster CG8421-PD... 27 9.0
>AE014296-2230|AAF49855.1| 150|Drosophila melanogaster CG11258-PA
protein.
Length = 150
Score = 160 bits (389), Expect = 7e-40
Identities = 72/131 (54%), Positives = 96/131 (73%)
Query: 1 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 60
MVFL++ R RGPDEFWRKRR+F+LAAHY R RN YS A+R+VHRAL YATK RKLK
Sbjct: 1 MVFLNLPLLVRSRGPDEFWRKRRIFKLAAHYRSRTRNVYSFAIRSVHRALAYATKGRKLK 60
Query: 61 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 120
K DM LW R+ A C+Q+ + L + +EGL R++I+L++K LSDLA WEP++FEAL ++
Sbjct: 61 KLDMAQLWSTRVEAGCQQYGVGLETFKEGLARSDILLNKKVLSDLAIWEPRSFEALVKIS 120
Query: 121 KYKLETDRFID 131
+ + + D
Sbjct: 121 RERAAVEGMPD 131
>AY119610-1|AAM50264.1| 825|Drosophila melanogaster LD34829p
protein.
Length = 825
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 76 CEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFE--ALAAVAKYKLETDRFIDGQ 133
C++H L R+ R +I++ ++ +S EP+ + + + A+ + TD I +
Sbjct: 742 CKKHGTYLLKKRDSGQRPHILIKADESNEESSSEPEDEDDKLIPSYARMQQHTDAAIH-K 800
Query: 134 DKCHPTGIN 142
K HPT N
Sbjct: 801 IKAHPTNEN 809
>AY071152-1|AAL48774.1| 485|Drosophila melanogaster RE18294p
protein.
Length = 485
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 71 RITAACEQHNITLFSLREG--LDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDR 128
RIT Q + + G + R N +L ++ SW P F L A + T
Sbjct: 291 RITVVAVQASSAQRKVERGRRMKRTNCLLISIAIIFGVSWLPLNFFNLYADMERSPVTQS 350
Query: 129 FIDGQDKCHPTGINLNLKDVMLEAWLNE 156
+ CH G++ + +L WLN+
Sbjct: 351 MLVRYAICHMIGMSSACSNPLLYGWLND 378
>AF364400-1|AAK50050.1| 481|Drosophila melanogaster neuropeptide F
receptor protein.
Length = 481
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 71 RITAACEQHNITLFSLREG--LDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDR 128
RIT Q + + G + R N +L ++ SW P F L A + T
Sbjct: 287 RITVVAVQASSAQRKVERGRRMKRTNCLLISIAIIFGVSWLPLNFFNLYADMERSPVTQS 346
Query: 129 FIDGQDKCHPTGINLNLKDVMLEAWLNE 156
+ CH G++ + +L WLN+
Sbjct: 347 MLVRYAICHMIGMSSACSNPLLYGWLND 374
>AE014297-411|AAF51909.3| 485|Drosophila melanogaster CG1147-PA
protein.
Length = 485
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 71 RITAACEQHNITLFSLREG--LDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDR 128
RIT Q + + G + R N +L ++ SW P F L A + T
Sbjct: 291 RITVVAVQASSAQRKVERGRRMKRTNCLLISIAIIFGVSWLPLNFFNLYADMERSPVTQS 350
Query: 129 FIDGQDKCHPTGINLNLKDVMLEAWLNE 156
+ CH G++ + +L WLN+
Sbjct: 351 MLVRYAICHMIGMSSACSNPLLYGWLND 378
>AE013599-2414|AAM68495.2| 810|Drosophila melanogaster CG6967-PB,
isoform B protein.
Length = 810
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 76 CEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFE--ALAAVAKYKLETDRFIDGQ 133
C++H L R+ R +I++ ++ +S EP+ + + + A+ + TD I +
Sbjct: 727 CKKHGTYLLKKRDSGQRPHILIKADESNEESSSEPEDEDDKLIPSYARMQQHTDAAIH-K 785
Query: 134 DKCHPTGIN 142
K HPT N
Sbjct: 786 IKAHPTNEN 794
>AE013599-2413|AAF57908.2| 825|Drosophila melanogaster CG6967-PA,
isoform A protein.
Length = 825
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 76 CEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFE--ALAAVAKYKLETDRFIDGQ 133
C++H L R+ R +I++ ++ +S EP+ + + + A+ + TD I +
Sbjct: 742 CKKHGTYLLKKRDSGQRPHILIKADESNEESSSEPEDEDDKLIPSYARMQQHTDAAIH-K 800
Query: 134 DKCHPTGIN 142
K HPT N
Sbjct: 801 IKAHPTNEN 809
>BT003633-1|AAO39637.1| 359|Drosophila melanogaster AT24863p
protein.
Length = 359
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 101 SLSDLASWEPKTFEALAAVAKYKLE 125
+++ +AS+ P+TFE L+A+ KY E
Sbjct: 244 NVASMASYVPETFEQLSAMYKYAQE 268
>AY060905-1|AAL28453.1| 556|Drosophila melanogaster GM05229p
protein.
Length = 556
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 101 SLSDLASWEPKTFEALAAVAKYKLE 125
+++ +AS+ P+TFE L+A+ KY E
Sbjct: 441 NVASMASYVPETFEQLSAMYKYAQE 465
>AE013599-2185|AAM70948.2| 556|Drosophila melanogaster CG8421-PE,
isoform E protein.
Length = 556
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 101 SLSDLASWEPKTFEALAAVAKYKLE 125
+++ +AS+ P+TFE L+A+ KY E
Sbjct: 441 NVASMASYVPETFEQLSAMYKYAQE 465
>AE013599-2184|AAF58064.2| 556|Drosophila melanogaster CG8421-PD,
isoform D protein.
Length = 556
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 101 SLSDLASWEPKTFEALAAVAKYKLE 125
+++ +AS+ P+TFE L+A+ KY E
Sbjct: 441 NVASMASYVPETFEQLSAMYKYAQE 465
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.324 0.135 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,235,016
Number of Sequences: 52641
Number of extensions: 249808
Number of successful extensions: 592
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 587
Number of HSP's gapped (non-prelim): 11
length of query: 159
length of database: 24,830,863
effective HSP length: 79
effective length of query: 80
effective length of database: 20,672,224
effective search space: 1653777920
effective search space used: 1653777920
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)
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