Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000397-TA|BGIBMGA000397-PA|IPR001478|PDZ/DHR/GLGF
(228 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 216 1e-56
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 44 1e-04
SB_17677| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_52290| Best HMM Match : PDZ (HMM E-Value=8.6e-18) 40 0.001
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0) 40 0.002
SB_26957| Best HMM Match : PDZ (HMM E-Value=0) 39 0.004
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 35 0.048
SB_24051| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.084
SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0) 34 0.11
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 33 0.15
SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 33 0.20
SB_3725| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 32 0.45
SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15) 32 0.45
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 32 0.45
SB_33553| Best HMM Match : DUF101 (HMM E-Value=3.7) 32 0.45
SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07) 32 0.45
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18) 32 0.45
SB_22623| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 32 0.45
SB_19549| Best HMM Match : DUF101 (HMM E-Value=3.7) 32 0.45
SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36) 32 0.45
SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32) 32 0.45
SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32) 32 0.45
SB_55857| Best HMM Match : STN (HMM E-Value=6) 32 0.45
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 32 0.45
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11) 32 0.45
SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18) 32 0.45
SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08) 31 0.60
SB_4796| Best HMM Match : Arfaptin (HMM E-Value=3.5e-16) 31 0.60
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 31 0.60
SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_45959| Best HMM Match : DUF1091 (HMM E-Value=3.6) 31 1.0
SB_31184| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3) 31 1.0
SB_49126| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 31 1.0
SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12) 31 1.0
SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 31 1.0
SB_15386| Best HMM Match : CSE2 (HMM E-Value=0.18) 31 1.0
SB_11192| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21) 31 1.0
SB_45989| Best HMM Match : TFIIE_alpha (HMM E-Value=5) 30 1.4
SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12) 30 1.4
SB_51039| Best HMM Match : OAR (HMM E-Value=0.92) 30 1.8
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 1.8
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 30 1.8
SB_8291| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_46923| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 29 3.2
SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_49332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_19260| Best HMM Match : FIVAR (HMM E-Value=6.2) 29 4.2
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 5.5
SB_5131| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=0.076) 28 5.5
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_7863| Best HMM Match : Pentaxin (HMM E-Value=1.8) 28 7.3
SB_31733| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 216 bits (528), Expect = 1e-56
Identities = 113/244 (46%), Positives = 163/244 (66%), Gaps = 22/244 (9%)
Query: 1 MKKLLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSR 60
M++LLGGQIGL+DFIFAH KG+ K +E+VK + ALGLTITDNGAG AF+KRIKEGSI +
Sbjct: 249 MERLLGGQIGLDDFIFAHIKGQKKIVEVVKDQPALGLTITDNGAGCAFVKRIKEGSIADK 308
Query: 61 IPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIPKGTTFIMRLVEPLKSGFGSIGPKTGS 120
P I +GDH+E +NG+ +VG RH++VA++L+++ T + LVEPL+ GFG+IGP+T S
Sbjct: 309 TPQICIGDHVEYINGQYVVGSRHFDVARMLREVDVTGTITLHLVEPLR-GFGAIGPRTAS 367
Query: 121 -GRS-----GKKQNFGSGKETLRFKANGQATIENEHDDKSKA--------------GIEK 160
G+S ++ G+GK TLR KA G +E + A ++K
Sbjct: 368 RGQSTEEPVNAEKKIGTGKATLRLKAKGPPVVEEITEPTLIASCIFQAWESTWECVAMKK 427
Query: 161 INGLLESFMGINDSELASQMWDLAEGKQNSMELAEAIDNSDLQEFGFTDEFIIELWGVIT 220
++ LLE+F+GI D ELA+ + DL++ K N + A +D + +F F D+FI ++WG+I
Sbjct: 428 VDDLLENFLGIRDEELANTLVDLSKNKTNPSDFAMNVD-ENFSDFQFPDDFIFDIWGLIN 486
Query: 221 DARS 224
DAR+
Sbjct: 487 DARA 490
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 8 QIGLEDFIFAHRKGRPKE-----IEIVKTEDALGLTIT---DNGAGYAFIKRIKEGSIVS 59
Q L++ I A +G E I+++K + +GL + D G +IK I+ G+
Sbjct: 2267 QTSLQELINARNEGAEIEEGILSIQLLKEDQGIGLMVIGGLDTPLGMLYIKDIQPGTPAE 2326
Query: 60 RIPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIP 94
+ H+ GD + ++N E +VG H ++LK+ P
Sbjct: 2327 KCGHLRTGDQLLQVNDECLVGVTHAYALEVLKNTP 2361
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 23 PKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKR 82
P IE K +LG+ N +G + + +V + ++ VGD++ +N + K
Sbjct: 495 PFVIEFQKKFRSLGIKAGLNDSGRVVVTEVSSFGLVGKDGNVRVGDYLLSINDIKLDNKS 554
Query: 83 HYEVAKILKDIPKG 96
EV ++LK PKG
Sbjct: 555 AEEVNQLLKTCPKG 568
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 49 IKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKIL-KDIPKGTTFIMRLVEPL 107
++RI GS+ R ++ GD + +NGE++ H IL K K I+R V L
Sbjct: 221 VRRILPGSVCDRNGKLQPGDRLISMNGESLTNVTHSTALHILKKPTDKVVLVILRDVHDL 280
Query: 108 KS 109
S
Sbjct: 281 TS 282
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/53 (20%), Positives = 27/53 (50%)
Query: 49 IKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIPKGTTFIM 101
++ + + ++ I GD + +NG + G H EV +L+++P+ ++
Sbjct: 2534 VRHVVPLGVAAKDGRIRKGDRVLSVNGRSTKGLTHQEVLNLLQNLPRRVVLVV 2586
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 64 IEVGDHIEKLNGENMVGKRHYEVAKILKDIPKGTTFI 100
+E+GD + ++NG +M G + E + ++ +P G I
Sbjct: 2708 LEIGDEVLEVNGRHMRGMTNVEALEAIRALPYGAIVI 2744
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRH 83
K + I K+ D LG T+ N G I RI +G + + GD I ++NG +M GK
Sbjct: 446 KIVRIDKSCDPLGATVK-NEDGAVLIGRIVKGGAAEKSGLLHEGDEILEINGVHMKGKSV 504
Query: 84 YEVAKILKDIPKGTTFIM 101
EV ++L D+ TF++
Sbjct: 505 SEVCELLADMNGTLTFLL 522
>SB_17677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 685
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 24 KEIEIVKT-EDALGLTIT-DNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGK 81
K + ++K+ ++ LG T+ D G + RI G +V R + VGD I+++N ++++GK
Sbjct: 187 KYVRLIKSGKEPLGATVKCDEDTGDIVVARILRGGMVDRSGTLGVGDVIQEINNQSVIGK 246
Query: 82 RHYEVAKILKDIPKGTTF 99
EV +I++ + F
Sbjct: 247 TTNEVVEIMERLSGSVLF 264
>SB_52290| Best HMM Match : PDZ (HMM E-Value=8.6e-18)
Length = 124
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 22 RPKEIEIVKTEDALGLTITDN-GAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVG 80
+P E+ ++K LG+++T G +IKR+ G + ++V D I ++NG+++
Sbjct: 7 QPFEVHLIKGPQGLGMSLTGGESGGPIYIKRLVPGGSAALCGQLQVNDVILQVNGKSLDR 66
Query: 81 KRHYEVAKILKDIPKGTTFIMR 102
+ E IL++ P +++
Sbjct: 67 LTYREALSILRNCPPEVRLLVK 88
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 48 FIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIPKGTTFIMRLVEP 106
FIK I GS+ + VGD I K+NGE++ G H V +L+ I TT + + P
Sbjct: 1936 FIKTISPGSVAEEDGRLRVGDQILKVNGEDVQGMSHARVIGMLRKI--STTVDLEIKRP 1992
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 26 IEIVKTEDALGLTI-----TDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVG 80
+E+ K +LGL++ T G ++K + R I +GD I ++NG ++VG
Sbjct: 1255 VELEKIGSSLGLSVSGGVNTTVKLGGIYVKSLMLNGPADRNGKIRIGDRILEVNGVSLVG 1314
Query: 81 KRHYEVAKILKDIPK 95
H + +I+K P+
Sbjct: 1315 VTHKQAVEIIKRAPQ 1329
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 20 KGRPKEIEIVKTEDALGLTIT---DNGAGYAFIKRIKE---GSIVSRIPHIEVGDHIEKL 73
+G+ +++VK LGL++ D+ + + RIK+ G + ++VGD I+++
Sbjct: 1357 EGQTFTVDLVKGIGGLGLSLVGGRDSDPEHGGLLRIKKMFPGQPATLSGKLQVGDIIQEV 1416
Query: 74 NGENMVGKRHYEVAKILK 91
NG+++ H + I++
Sbjct: 1417 NGKSLANASHQDAINIIR 1434
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 48 FIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIP 94
F+K + EGS+ + ++ GD I +NG ++ H LK P
Sbjct: 997 FVKSVTEGSVAFKDGRLKAGDRILAVNGTSLEQVSHEYAVMQLKTAP 1043
>SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0)
Length = 465
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 26 IEIVKTE-DALGLTITDNGAGYAF-IKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRH 83
I++VK + LG + + + I I +GS + +++ GD I ++NG+++
Sbjct: 8 IKLVKRKVGGLGFLVKERASKPCVEISDIVKGSAAEGVSNLQPGDIILEVNGKSIEESHF 67
Query: 84 YEVAKILKDIPKGTTFIMRLVEPLKSGFGSIGPKTGSGRSGKKQNFGSGKETLRFKANGQ 143
+ +L + G++ +++ ++S GS ++ K + KE + NG
Sbjct: 68 KDAVDVLSGVETGSSVSLKIKPSVRS--------NGSAKTSSK----NIKENVTQPINGN 115
Query: 144 ATIENEHDDKSKAGIEKINGLLESFMGINDSELASQMWDLAEG 186
+E+ +K K + NG E+ G +D E+ M +A G
Sbjct: 116 VEEPSENANKPKNEEARENGTTETVNGQSDPEVNDNMNGVASG 158
>SB_26957| Best HMM Match : PDZ (HMM E-Value=0)
Length = 1685
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 32 EDALGLTITDNGAGY---AFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAK 88
E LG++I N G ++ + E S V+R+ ++ GD I +++G ++ H E +
Sbjct: 1302 EVGLGISIAGNKRGQRQGVHVRHVLENSSVARLGELKAGDQILEVDGHDLRNASHEEAVE 1361
Query: 89 ILKDIPKGTTFIMRLVE 105
+++ F++R ++
Sbjct: 1362 VIRRARSPVRFVVRTIQ 1378
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 41 DNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILK 91
++G+G + + G ++ I VGDHI +N E+++G + +L+
Sbjct: 1150 EDGSG-CVVTSVMRGGAIAIDGRIGVGDHIVAVNDESLIGLSRHAARAVLR 1199
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 40 TDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILK 91
+D AG FIK I GS + + V D I ++ ++ GK + E +ILK
Sbjct: 651 SDELAGI-FIKSIAHGSTAALDGRLRVNDQIIQVGSVSLHGKNNGEAVEILK 701
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 64 IEVGDHIEKLNGENMVGKRHYEVAKILKDIP 94
I+ GDH+ ++NG ++ H EV +++ +P
Sbjct: 845 IQSGDHLIEVNGVGVLDLGHNEVVTLIQSLP 875
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 36 GLTITDNGAGYA----FIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILK 91
GL+I G G A FI +K G + I+ D I ++N + G HY+ + +LK
Sbjct: 1517 GLSIA-GGKGVAVNRIFIVDVKSGGPAEQDGRIKQADEILEVNRTPVRGMSHYQASTVLK 1575
Query: 92 D 92
+
Sbjct: 1576 N 1576
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 36.7 bits (81), Expect = 0.016
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 20 KGRPKEIEIVKTE-----DALGLTIT--DNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEK 72
+GR E E+++TE G TI D IK I ++ + GD + K
Sbjct: 434 EGRRLEGELIRTELMKGFRGFGFTIIGGDQSGELLQIKSIVPDGAAAKDGKLRTGDALIK 493
Query: 73 LNGENMVGKRHYEVAKILKDIPKGTTFIMRLVEPLKSGFGSIGP--KTGSGRSGKKQNFG 130
+NG ++V K H EV + + +P + ++ F P +T + + G
Sbjct: 494 VNGRSVVNKTHQEVVSMFQSMPTNEPIELDMIRGYPLPFDPDDPNVETIGSYTVVRSPQG 553
Query: 131 SGKETLRFKANGQATIENEHDDKS 154
+ L AN + + N H D+S
Sbjct: 554 DNQSGLLQPAN-KYGLPNAHSDQS 576
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 49 IKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIPKGTTFIMRLVE 105
I RI +GS R + VGD + +NG ++VG H ++ +K G + +R+ +
Sbjct: 919 IGRIIQGSPADRCRELYVGDKLVAVNGTSIVGMHHSDIVNTIKQ--SGLSVTLRIAQ 973
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 25 EIEIVKTEDALGLTITDNGAGYA--FIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKR 82
EIE+++ G +I ++ +I EG + I+VGD + ++NG +
Sbjct: 1272 EIELIRKNQGYGFSIRGGQEMDMPIYVLKIAEGGVADLDGRIKVGDEVLEINGRSTQHML 1331
Query: 83 HYEVAKILKDIPKGTTFIMRLVE-PLKSGFGSIGPKTGSGRSGKKQNFGSGKETLR 137
H + +++ K + R P G + P RS +++ SG E R
Sbjct: 1332 HTDAISMIRGGSKVRLVLRRSSHPPTIDGLPNGEPPRSLSRSAYRKS-SSGDEFSR 1386
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 36.7 bits (81), Expect = 0.016
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 6 GGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIE 65
G Q ++ + +R+ R I+ G T+T N ++ + +GS ++ ++
Sbjct: 445 GEQKYIKQCLMDYRRDRSVPIKRGGPGAGFGFTLTGNAP--VCVRSVDKGSPAAQA-RLK 501
Query: 66 VGDHIEKLNGENMVGKRHYEVAKILKDIPKGTTFIMR 102
GDHI ++NG N+ K H V ++LK T +++
Sbjct: 502 PGDHILEINGLNVRNKTHAHVVELLKGSGSQPTLLVQ 538
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 36 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIPK 95
G T+T N ++ + +GS ++ ++ GDHI ++NG N+ K H V ++LK
Sbjct: 307 GFTLTGNAP--VCVRLVDKGSPAAQA-RLKPGDHILEINGLNVRNKTHAHVVELLKGSGS 363
Query: 96 GTTFIMR 102
T +++
Sbjct: 364 QPTLLVQ 370
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 35.1 bits (77), Expect = 0.048
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 21 GRPKEIEIVKTE-DALGLTIT---DNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGE 76
G P+ + + K + + LG++IT ++G I I +G +R + VGD I +NG
Sbjct: 242 GEPRTVIVNKDKTEGLGISITGGKEHGVPI-LISEIHDGMPAARCGGLYVGDAILAVNGI 300
Query: 77 NMVGKRHYEVAKILKDIPKGTTFIMRLVEP 106
++ +H + KIL I T + V P
Sbjct: 301 DLQDAKHNDAVKILSSIHGEITMEVLYVAP 330
>SB_24051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 889
Score = 34.7 bits (76), Expect = 0.064
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 5/109 (4%)
Query: 63 HIEVGDHIEKLNGENMVGKRHYEVAKILKDIPKGTTFIMRLVE--PLKSGFGSIGPKTGS 120
H+ + IE G +++ +R + ++L+D P T + R P G + G+
Sbjct: 212 HVRLARRIEDHQGRDVLTERLRDAGELLRDHPHANTHVARAERGLPAVESLGCLTQPAGT 271
Query: 121 GRSGKKQNFGSGKETLRF---KANGQATIENEHDDKSKAGIEKINGLLE 166
G++ +E L K+ HDD + E+ L+
Sbjct: 272 ATGGEQTEIADAREKLAILVGKSREMVDKALHHDDVKRMSAEEARNFLK 320
>SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 34.3 bits (75), Expect = 0.084
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 12 EDFIFAHRKGRPKEIEIVKTE-DALGLTITDNGAGY----AFIKRIKEGSIVSRIPHIEV 66
ED + + +E+ + K +ALG+ I ++G G A I + + ++ + V
Sbjct: 223 EDLSLLSDETKAREVVVNKKPGEALGVMIVESGWGSMIPTAIIAHLAKDGPAAKSGRVNV 282
Query: 67 GDHIEKLNGENMVGKRHYEVAKILKDIPKGTTFIMRLV 104
GD I +N ++VG E ++K+ GT ++ V
Sbjct: 283 GDQILSVNNTSLVGLPLPECQNVIKNSRPGTKVTLKTV 320
>SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1277
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 48 FIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIPK 95
F+ RI GS+V + VGD I ++NG + G R ++V +++ IPK
Sbjct: 141 FVSRITPGSLVDCDGSLAVGDEILEVNGVCLAGFRVHDVVHLIQ-IPK 187
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 24 KEIEIVKTEDALGLTITDN-------GAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGE 76
+EI ++K LG +I G +I +I EG + ++VGD I +N +
Sbjct: 15 EEIVLIKGSKGLGFSIAGGSGNQHVPGDNGIYITKIIEGGAAQQDGRLQVGDKIISVNLQ 74
Query: 77 NMVGKRHYEVAKILKDIPKGTTFIM 101
N+ H + ++LK + T ++
Sbjct: 75 NLEDVSHEDAVQVLKATKERVTIVV 99
>SB_7216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 33.5 bits (73), Expect = 0.15
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 26 IEIVKTEDALGLTITDNGAGY--------AFIKRIKEGSIVSRIPHIEVGDHIEKLNGEN 77
+++ K E LGL+I G G F+K + EG + I+V D I +++G +
Sbjct: 647 VDLEKDEKGLGLSIIGLGVGTDTGVEKLGIFVKSLTEGGAAEKDGRIQVNDQIIEVDGVS 706
Query: 78 MVGKRHYEVAKILKDIPKGTTFIMRLVEPLKSGF 111
+VG A LK GT + L +K G+
Sbjct: 707 LVGVTQMFAAVTLKH-TSGTVRYVHL-RRVKGGY 738
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 26 IEIVKTEDA-LGLTIT---DNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGK 81
+E++K + LGL + D+ ++ I S S+ + +GD + ++NG + G+
Sbjct: 122 LEMIKPSNGYLGLVLVGGADSPLKNHYVSDILPNSCASKCDCVRIGDELLEVNGHKLSGR 181
Query: 82 RHYEVAKILKDIP 94
H + I + +P
Sbjct: 182 THADALTIFRSLP 194
>SB_3725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 32.3 bits (70), Expect = 0.34
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 24 KEIEIVKTE-DALGLTITDNGAGYA--FIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVG 80
+ I ++K E LG++I I +I +G + + +GD I +NGE++
Sbjct: 291 RTIRVIKQEVGGLGISIKGGKENRMPILISKIFKGLAADQTESLYIGDAILAVNGEDLRH 350
Query: 81 KRHYEVAKILKDIPKGTTFIMRLVEPLKSGF 111
H E + LK K +R V+ + S F
Sbjct: 351 ATHDEAVRALKRAGKEVDLTVRHVKEVTSYF 381
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 646 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 690
>SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15)
Length = 615
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 243 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 287
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 693 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 737
>SB_33553| Best HMM Match : DUF101 (HMM E-Value=3.7)
Length = 252
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 75 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 119
>SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07)
Length = 409
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 104 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 148
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 25 EIEIVKTEDALGLTITD-NGAGY----AFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMV 79
EI K +GL+I GAG +IK++ + ++ ++ GD + +NGE+++
Sbjct: 980 EITFNKGRGGMGLSIVAAKGAGQDRLGIYIKQVVKDGPAAKDGRLQAGDQLIAVNGESLI 1039
Query: 80 GKRHYEVAKILKDIPKGTTFIMRLVE 105
G + A+ + + G +R+V+
Sbjct: 1040 GVSQEKAAECM--VRSGANVTLRIVK 1063
>SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18)
Length = 802
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 590 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 634
>SB_22623| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 391
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 272 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 316
>SB_19549| Best HMM Match : DUF101 (HMM E-Value=3.7)
Length = 225
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 48 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 92
>SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 748
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 248 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 292
>SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32)
Length = 546
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 75 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 119
>SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32)
Length = 517
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 75 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 119
>SB_55857| Best HMM Match : STN (HMM E-Value=6)
Length = 262
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 143 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 187
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 31.9 bits (69), Expect = 0.45
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 33 DALGLTIT--DNGAGY---AFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVA 87
D LG +IT DN AG F+K I + GD I ++NG M GK E
Sbjct: 179 DGLGFSITTRDNPAGGHTPIFVKSILAKGAAIEDGRLRGGDQIIEVNGMPMTGKNQGEAV 238
Query: 88 KILKDIPKGTTFIMRLVEPLKSGFGSIGPKTGSGRSGKKQNFGSGKETLRFK 139
IL+ +++ E ++S P + GK+ L FK
Sbjct: 239 NILRSTEGVVKLLIQREELVQS---PTKPAIELNEDSTRYLREQGKQVLTFK 287
>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 794 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 838
>SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11)
Length = 512
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 203 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 247
>SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 669 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 713
>SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18)
Length = 1046
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 89 EAFVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 133
>SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08)
Length = 889
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 48 FIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILK 91
++K I G + S +E+GD+I K+NG+++ + K++K
Sbjct: 504 YVKDISFGGVASEQKSLEIGDYILKMNGKHLDKIIASSIEKVIK 547
>SB_4796| Best HMM Match : Arfaptin (HMM E-Value=3.5e-16)
Length = 270
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/78 (21%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 20 KGRPKEIEIVKT-EDALGLTITDNGAGYA---FIKRIKEGSIVSRIPHIEVGDHIEKLNG 75
+G+P + ++K ++ +G++I GA ++ ++ + + S+ ++ GD I +NG
Sbjct: 14 QGKPGSVTLIKDKQNLIGISI-GGGAPLCPCLYVVQVFDNTPASKDGTLQAGDEIVGVNG 72
Query: 76 ENMVGKRHYEVAKILKDI 93
+++ GK +VA+ ++ +
Sbjct: 73 KSLRGKTKVDVARAIQAV 90
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 63 HIEVGDHIEKLNGENMVGKRHYEVAKILKDI 93
H++ GDH+ + NGE+MVG + + IL+ +
Sbjct: 269 HLQEGDHLLEANGESMVGVTNDKAIAILRKV 299
>SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 112 GSIGPKTGSGRSGKKQNFGS-GKETLRFKANGQATIENEHDDKSKAGIEKINGLL 165
GS+ P TGS SG + + ++ +F NG +E H S + + ING L
Sbjct: 329 GSLHPTTGSPTSGSNCTYVALDEKEYKFLENGTILVEAHHRRYSNSSYKIINGTL 383
>SB_45959| Best HMM Match : DUF1091 (HMM E-Value=3.6)
Length = 360
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
KE+E+VK+ LGLTI+DN + A + + + S
Sbjct: 129 KELEVVKSTKLLGLTISDNLSWNAHVNEVVKKS 161
>SB_31184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
KE+E+VK+ LGLTI+DN + A + + + S
Sbjct: 547 KELEVVKSTKLLGLTISDNLSWNAHVNEVVKKS 579
>SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3)
Length = 360
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ A + P E+E ++ AL T++ NG AF R +GS
Sbjct: 118 EAFVSAIDESIPFEVETDASDVALAATLSQNGRPVAFFSRALQGS 162
>SB_49126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
KE+E+VK+ LGLTI+DN + A + + + S
Sbjct: 395 KELEVVKSTKLLGLTISDNLSWNAHVNEVVKKS 427
>SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 1048
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 14 FIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 695 FVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 737
>SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12)
Length = 642
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
KE+E+VK+ LGLTI+DN + A + + + S
Sbjct: 465 KELEVVKSTKLLGLTISDNLSWNAHVNEVVKKS 497
>SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 870
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 12 EDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
E F+ + + P E+E +E AL T++ NG AF R +GS
Sbjct: 693 EAFVSSIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 737
>SB_15386| Best HMM Match : CSE2 (HMM E-Value=0.18)
Length = 379
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
KE+E+VK+ LGLTI+DN + A + + + S
Sbjct: 202 KELEVVKSTKLLGLTISDNLSWNAHVNEVVKKS 234
>SB_11192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
KE+E+VK+ LGLTI+DN + A + + + S
Sbjct: 113 KELEVVKSTKLLGLTISDNLSWNAHVNEVVKKS 145
>SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21)
Length = 1032
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 14 FIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGS 56
F+ A + P E+E +E AL T++ NG AF R +GS
Sbjct: 311 FVSAIDESIPFEVETDASEVALAATLSQNGRPVAFFSRALQGS 353
>SB_45989| Best HMM Match : TFIIE_alpha (HMM E-Value=5)
Length = 194
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFIKRI 52
KE+E+VK+ LGLTI+DN + A + +
Sbjct: 20 KELEVVKSTKLLGLTISDNLSWNAHVNEV 48
>SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12)
Length = 217
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 17 AHRKGRPKEIEIVK-TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNG 75
A KG +E+ + K E LGL + G F+ + + S + + + GD I +++G
Sbjct: 36 AEIKGGVREVILCKDNEGKLGLRVRAVNKGI-FVAFVHKDSPAA-LGGLRFGDQILQIDG 93
Query: 76 ENMVGKRHYEVAKILKDI-PKGTTFIMR 102
ENM G + K LK+ P+ F +R
Sbjct: 94 ENMAGFDTDKAMKRLKNASPQRVVFAVR 121
>SB_51039| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 545
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 19 RKGRPKEIEIVKTEDALGLTITDNGAGYAFIKRI---KEGSIVSRIPHIEVGDHIEKLNG 75
R+G K E K + L +D G +KR ++ + + + GD+I+K
Sbjct: 151 RQGVVKTPEEEKESNTLKALASDISEGLKHVKRSGSNEKRAAYKALKSLAFGDNIKKSRA 210
Query: 76 ENMVGKRHYEVAKILKD 92
+ +GK+H E KIL D
Sbjct: 211 KKSLGKKHVE-TKILFD 226
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 48 FIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKIL 90
FI I GS + P + +GD I ++NG+++ E K+L
Sbjct: 816 FISFISPGSTAALNPMLAIGDKIVEVNGQSVENLSQLETEKLL 858
>SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 2682
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 146 IENEHDDKSKAGIEKINGLLESFMGINDSELASQMWDLAEGKQNSMELAEAID 198
+ E + + G+E I G E+ M D++L+ + D EG N +L AID
Sbjct: 1655 LSTEDPNTRRKGLENIAGDNEAMMEFLDTQLSGKTLDCNEGSANE-DLKSAID 1706
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 23 PKEIEIVKTE--DALGLTI---TDNGAG-YAFIKRIKEGSIVSRIPHIEVGDHIEKLNGE 76
P E++IV+ + LGL I T+ G + ++ + +GS R + GD + + GE
Sbjct: 88 PGELQIVRIPVVNGLGLCIVGGTNRPEGPHVYVDNMIDGSDAYRDNRLRRGDQLVTVAGE 147
Query: 77 NMVGKRHYEVAKIL 90
+VG H + +L
Sbjct: 148 TLVGVTHEQAKSLL 161
>SB_8291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFI----KRIKEGSI 57
KEIE+V + LGLT+T+N G + KR+ +GSI
Sbjct: 77 KEIEVVTSVKLLGLTLTNNLIGTTMLLRSRKRLVKGSI 114
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 112 GSIGPKTGSGRSGKKQNFGSGKETLRFKANGQATIENEHDDKSKAGIEKINGLLESFMGI 171
G G SG SG+ G E+ +G++ E D + + I+K NG+ + +
Sbjct: 692 GESGESGESGESGESGESGESGESGESGESGESGDSGESQDNADSSIQKRNGIPQEKVS- 750
Query: 172 NDSELASQMWDLAEGKQNSMELAEAIDNSDLQEFGFTDE 210
+E+ + + Q S E E+ ++ + E G +DE
Sbjct: 751 KKAEIGQK----KQLSQKSDEPGESGESGESGESGESDE 785
>SB_46923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFI----KRIKEGSI 57
KEIE+V + LGLT+T+N G + KR+ +GSI
Sbjct: 128 KEIEVVTSVKLLGLTLTNNLIGTTMLLRSRKRLVKGSI 165
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 123 SGKKQNFGSGKETLRFKANGQATIENEHDDKSKAGIEKINGLLESFMGINDSELASQMWD 182
S +QN KE L F+ G + + + EK+NG++ + EL ++ D
Sbjct: 240 SSLEQNESECKERL-FELTGSLRAKEVALENVQESFEKLNGMVFGSFEELEMELKGRLMD 298
Query: 183 LAEGKQN-SME---LAEAID 198
+G QN SME LA+++D
Sbjct: 299 REKGLQNQSMENRKLAQSLD 318
>SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 49 IKRIKEGSIVSRIPHIEVGDHIEKLNGENMVG 80
I RI G ++ R + VGD I+++NG++M G
Sbjct: 166 ISRIIHGGMIDRQGLLHVGDIIKEVNGKDMSG 197
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 115 GPKTGSGRSGKKQNFGSGKETLRFKANGQATIENEHDDK 153
GPK G + KK + K+TL+ K G++ +++ D+K
Sbjct: 722 GPKAGKEKVKKKSDKKPAKKTLQLKKKGKSKEKHKVDEK 760
>SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 121 GRSGKKQNFGSGKETLRFKANGQATIENEHDDKSKAGIEKINGLLESFMGINDSELASQM 180
G + ++N + +E R N Q + + AGI +I+ + I+ + SQ
Sbjct: 11 GNTRTRRNLKNSQELARTHKNSQELARTHKNSQELAGISRIHKNSQELTRIHKNSQESQ- 69
Query: 181 WDLAEGKQNSMELAEAIDNSDLQEF 205
+ ++NS E NS QEF
Sbjct: 70 -EFTRTRKNSQEFTRTRKNS--QEF 91
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 59 SRIPHIEVGDHIEKLNGENMVGKRHYEVAKILK 91
S++ +E GD I +NG+++ GK H E +++
Sbjct: 550 SQVGGLEPGDEIVGINGKSIKGKSHEEAMNLIR 582
>SB_49332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 158 IEKINGLLESFMGINDSELA 177
++K++ LLE+F+GI D ELA
Sbjct: 1 MKKVDDLLENFLGIRDEELA 20
>SB_19260| Best HMM Match : FIVAR (HMM E-Value=6.2)
Length = 127
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 151 DDKSKAG--IEKINGLLESFMGINDSELASQMWDLAEGKQNSMELAEAIDNS 200
DD K G IEK+ E F + +SELA L E Q + EL + + N+
Sbjct: 40 DDIFKKGEYIEKLENAFEKFTKLINSELAHLQQILEETSQKNAELDQLLINN 91
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 24 KEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRI 61
K+IE VKT LGLTI+D+ A I + + SR+
Sbjct: 1988 KDIEAVKTAKLLGLTISDDLKWNAHISEVTR-KVASRL 2024
>SB_5131| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=0.076)
Length = 178
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 114 IGPKTGSGRSGKKQNFGSGKETLRFKANGQATIENEHDDKSKAGIEKINGLLESFMGIND 173
IG K GS GKK + GK + + IE + + S G K+ ++E G
Sbjct: 69 IGGKMGSVIGGKKGSVIGGKMESVIEGKMGSVIEGKME--SVIG-GKMGSVIEGKKG--- 122
Query: 174 SELASQMWDLAEGKQNSM 191
S + +MW + EGK S+
Sbjct: 123 SVIGGKMWSVIEGKMGSV 140
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.9 bits (59), Expect = 7.3
Identities = 32/181 (17%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 20 KGRPKEIEIVKTEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIE---KLNGE 76
K KEI+ +K +T + +++ KE +++ H+ I+ + E
Sbjct: 657 KAMEKEIDALKQNKDKDVTALKEELT-SEVQKYKEEKLMAEEKHLAEAQSIKVEYEKKVE 715
Query: 77 NMVGKRHYEVAKILKDIPKGTTFIMRLVEPLKSGFGSIGPKTGSGRSGKKQNFGSGKETL 136
+ +++ ++++ +I K ++ E LKS G + + + +
Sbjct: 716 EHIKEKNEAISQLQSEITKVEKERNQVSEQLKSALEETGKASREEKLLLEDRMSQHESYY 775
Query: 137 RFKANGQATIENEH----DDKSKAGIEKINGLLESFMGINDSELASQMWDLAEGKQNSME 192
+ + + A + E ++SK+ +EK+ LES + + E+ + L E ++ + E
Sbjct: 776 KKQLDDAANVHEEKLLRLQERSKSELEKLRAHLESDINEKEKEIERKDNALKEFQEKNKE 835
Query: 193 L 193
L
Sbjct: 836 L 836
>SB_7863| Best HMM Match : Pentaxin (HMM E-Value=1.8)
Length = 604
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 36 GLTITDNGAGYAFIKRIKEGSIVSRIPHIEVG------DHIEKLNGENMVGKRH 83
G+ +DNG + I G+ +SRI H + G DH++ NG + GK H
Sbjct: 340 GIDHSDNGNTLSGIDHSDNGNTLSRIDHSDNGNTLSGKDHLD--NGNTLSGKDH 391
>SB_31733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/16 (75%), Positives = 12/16 (75%)
Query: 10 GLEDFIFAHRKGRPKE 25
G E FIF H KGRPKE
Sbjct: 85 GDEVFIFQHPKGRPKE 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.136 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,314,778
Number of Sequences: 59808
Number of extensions: 296716
Number of successful extensions: 629
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 543
Number of HSP's gapped (non-prelim): 98
length of query: 228
length of database: 16,821,457
effective HSP length: 80
effective length of query: 148
effective length of database: 12,036,817
effective search space: 1781448916
effective search space used: 1781448916
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
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