GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000397-TA|BGIBMGA000397-PA|IPR001478|PDZ/DHR/GLGF
         (228 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    41   3e-05
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    30   0.049
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   3.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.3  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 41.1 bits (92), Expect = 3e-05
 Identities = 18/69 (26%), Positives = 37/69 (53%)

Query: 31  TEDALGLTITDNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKIL 90
           T++ +G+T+     G   + RI  G ++ R   + VGD I ++NG+ +  +   ++ ++L
Sbjct: 483 TDEPMGITLKMTEDGRCIVARIMHGGMIHRQATLHVGDEIREINGQPVQHQTVSQLQRLL 542

Query: 91  KDIPKGTTF 99
           +D     TF
Sbjct: 543 RDARGSVTF 551



 Score = 25.0 bits (52), Expect = 1.9
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 41  DNGAGYAFIKRIKEGSIVSRIPHIEVGDHIEKLNGENM--VGKRHYEVAKILKDIPKGTT 98
           +NG  Y FI   +  + +S   ++E G H + + G  +  + + H +    + D+     
Sbjct: 736 ENGRSYYFISHDEMMADISANEYLEYGTHEDAMYGTKLETIRRIHADGKMAILDVEPQAL 795

Query: 99  FIMRLVE 105
            I+R  E
Sbjct: 796 KILRTAE 802


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 30.3 bits (65), Expect = 0.049
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 55  GSIVSRIPHIEVGDHIEKLNGENMVGKRHYEVAKILKDIPKGTTF-IMRLVEPLKSGFGS 113
           GS++ R P+   GD+ ++L G N+       + ++L+D    T      L    +S  G+
Sbjct: 32  GSLLYRPPNSMAGDYGDELYGTNL----SLALGELLRDNISATVVGTHNLSGNGRSAAGN 87

Query: 114 IGPKTGSGRSGKKQNFGSGKETL 136
           + P TG+G +G +   G+ +  L
Sbjct: 88  LPPATGTGTAGSRGGDGTFQNQL 110


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 19  RKGRPKEIEIVKTEDALGLTITDNGAGYAFIKR 51
           R+   +  E+++  + LGL+I +NG+   FI R
Sbjct: 134 RRNNLRGEELLQMVEVLGLSILNNGSAPTFIGR 166


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 19  RKGRPKEIEIVKTEDALGLTITDNGAGYAFIKR 51
           R G+ + IE+++T + LGL+I + G    FI R
Sbjct: 198 RNGQ-RGIELLQTVETLGLSILNQGRKPTFIGR 229


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 4   LLGGQIGLEDFIFAHRKGRPKEIEIVKTEDALGLTITDNGAGYAF 48
           LL G        +   + +PK I +++  + LGL + + G  + F
Sbjct: 117 LLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTF 161


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 111 FGSIGPKTGSGRSGKKQNFGSGKETLRFKANGQATIENEHDDKSKAGIEKING 163
           +G+ G  T +G  G+K + G   E  R    GQA    +  ++   G + + G
Sbjct: 292 YGATGTTTTTGPKGEKGDRGEPGEPGRSGEKGQAGDRGQVGERGHKGEKGLPG 344


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.136    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,983
Number of Sequences: 2123
Number of extensions: 9371
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 8
length of query: 228
length of database: 516,269
effective HSP length: 62
effective length of query: 166
effective length of database: 384,643
effective search space: 63850738
effective search space used: 63850738
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)