Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000396-TA|BGIBMGA000396-PA|undefined
(81 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC016169-1|AAH16169.1| 333|Homo sapiens GIPC PDZ domain contain... 55 3e-08
BC012810-1|AAH12810.1| 333|Homo sapiens GIPC PDZ domain contain... 55 3e-08
BC004226-1|AAH04226.2| 300|Homo sapiens GIPC1 protein protein. 55 3e-08
BC000410-1|AAH00410.1| 333|Homo sapiens GIPC PDZ domain contain... 55 3e-08
AF089816-1|AAC67548.1| 333|Homo sapiens RGS-GAIP interacting pr... 55 3e-08
BC117314-1|AAI17315.1| 312|Homo sapiens GIPC PDZ domain contain... 55 4e-08
BC117312-1|AAI17313.1| 312|Homo sapiens GIPC PDZ domain contain... 55 4e-08
AB073738-1|BAB84712.1| 312|Homo sapiens PDZ domain protein GIPC... 55 4e-08
AC005175-1|AAC24304.1| 347|Homo sapiens R31449_1 protein. 54 5e-08
BC036075-1|AAH36075.1| 315|Homo sapiens GIPC PDZ domain contain... 53 2e-07
AB073737-1|BAB84711.1| 315|Homo sapiens PDZ domain protein GIPC... 53 2e-07
D82880-1|BAA11621.1| 853|Homo sapiens human ras GTPase-activati... 27 7.2
D78155-1|BAA11230.1| 850|Homo sapiens rasGTPase activating prot... 27 7.2
AF115573-1|AAD09821.1| 849|Homo sapiens GTPase-activating prote... 27 7.2
>BC016169-1|AAH16169.1| 333|Homo sapiens GIPC PDZ domain
containing family, member 1 protein.
Length = 333
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+ +LVFH Q AHGSP G I GF+NVKELY KIAE + ++
Sbjct: 55 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEV 97
>BC012810-1|AAH12810.1| 333|Homo sapiens GIPC PDZ domain
containing family, member 1 protein.
Length = 333
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+ +LVFH Q AHGSP G I GF+NVKELY KIAE + ++
Sbjct: 55 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEV 97
>BC004226-1|AAH04226.2| 300|Homo sapiens GIPC1 protein protein.
Length = 300
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+ +LVFH Q AHGSP G I GF+NVKELY KIAE + ++
Sbjct: 22 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEV 64
>BC000410-1|AAH00410.1| 333|Homo sapiens GIPC PDZ domain
containing family, member 1 protein.
Length = 333
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+ +LVFH Q AHGSP G I GF+NVKELY KIAE + ++
Sbjct: 55 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEV 97
>AF089816-1|AAC67548.1| 333|Homo sapiens RGS-GAIP interacting
protein GIPC protein.
Length = 333
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+ +LVFH Q AHGSP G I GF+NVKELY KIAE + ++
Sbjct: 55 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEV 97
>BC117314-1|AAI17315.1| 312|Homo sapiens GIPC PDZ domain
containing family, member 3 protein.
Length = 312
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+ +LVF Q AHGSP G I GF+NV+ELY KIAE + +P +I
Sbjct: 34 RPRLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEI 76
>BC117312-1|AAI17313.1| 312|Homo sapiens GIPC PDZ domain
containing family, member 3 protein.
Length = 312
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+ +LVF Q AHGSP G I GF+NV+ELY KIAE + +P +I
Sbjct: 34 RPRLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEI 76
>AB073738-1|BAB84712.1| 312|Homo sapiens PDZ domain protein GIPC3
protein.
Length = 312
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+ +LVF Q AHGSP G I GF+NV+ELY KIAE + +P +I
Sbjct: 34 RPRLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEI 76
>AC005175-1|AAC24304.1| 347|Homo sapiens R31449_1 protein.
Length = 347
Score = 54.4 bits (125), Expect = 5e-08
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+ +LVF Q AHGSP G I GF+NV+ELY KIAE + +P ++
Sbjct: 34 RPRLVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTEV 76
>BC036075-1|AAH36075.1| 315|Homo sapiens GIPC PDZ domain
containing family, member 2 protein.
Length = 315
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 41 QLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+LVFH Q AHGS G + GFS+++ELY +IA +E SP +I
Sbjct: 41 RLVFHAQLAHGSATGRVEGFSSIQELYAQIAGAFEISPSEI 81
>AB073737-1|BAB84711.1| 315|Homo sapiens PDZ domain protein GIPC2
protein.
Length = 315
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 41 QLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
+LVFH Q AHGS G + GFS+++ELY +IA +E SP +I
Sbjct: 41 RLVFHAQLAHGSATGRVEGFSSIQELYAQIAGAFEISPSEI 81
>D82880-1|BAA11621.1| 853|Homo sapiens human ras GTPase-activating
protein, Gap1m protein.
Length = 853
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 25 ESQSNGVDNSNGTQKSQLVFHCQQAHGSPL 54
E + N + NGT QLV H + HG PL
Sbjct: 156 ELKLNELITENGTVCQQLVVHIKACHGLPL 185
>D78155-1|BAA11230.1| 850|Homo sapiens rasGTPase activating protein
protein.
Length = 850
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 25 ESQSNGVDNSNGTQKSQLVFHCQQAHGSPL 54
E + N + NGT QLV H + HG PL
Sbjct: 156 ELKLNELITENGTVCQQLVVHIKACHGLPL 185
>AF115573-1|AAD09821.1| 849|Homo sapiens GTPase-activating protein
GAP1m protein.
Length = 849
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 25 ESQSNGVDNSNGTQKSQLVFHCQQAHGSPL 54
E + N + NGT QLV H + HG PL
Sbjct: 156 ELKLNELITENGTVCQQLVVHIKACHGLPL 185
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.311 0.129 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,248,886
Number of Sequences: 224733
Number of extensions: 295262
Number of successful extensions: 628
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 14
length of query: 81
length of database: 73,234,838
effective HSP length: 59
effective length of query: 22
effective length of database: 59,975,591
effective search space: 1319463002
effective search space used: 1319463002
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 57 (27.1 bits)
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