GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000396-TA|BGIBMGA000396-PA|undefined
         (81 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7JX82 Cluster: GH21964p; n=3; Endopterygota|Rep: GH219...    70   1e-11
UniRef50_UPI0000F2CA50 Cluster: PREDICTED: similar to PDZ domain...    59   1e-08
UniRef50_Q18488 Cluster: Putative uncharacterized protein; n=3; ...    57   8e-08
UniRef50_O14908 Cluster: PDZ domain-containing protein GIPC1; n=...    55   2e-07
UniRef50_Q5DI42 Cluster: SJCHGC06361 protein; n=1; Schistosoma j...    53   1e-06
UniRef50_UPI00005848B6 Cluster: PREDICTED: similar to GIPC1 prot...    49   2e-05
UniRef50_Q5B726 Cluster: Putative uncharacterized protein; n=1; ...    31   4.4  
UniRef50_UPI00006CB800 Cluster: hypothetical protein TTHERM_0057...    31   5.8  

>UniRef50_Q7JX82 Cluster: GH21964p; n=3; Endopterygota|Rep:
          GH21964p - Drosophila melanogaster (Fruit fly)
          Length = 336

 Score = 69.7 bits (163), Expect = 1e-11
 Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 5/61 (8%)

Query: 26 SQSNGVDNSNGTQ-----KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPED 80
          SQ + + N+N        K  LVFHCQ AHGSP GLI  FS+V+ELY+KIAEC++ S +D
Sbjct: 32 SQGSHISNNNNNSIPEKTKPPLVFHCQLAHGSPTGLIHDFSSVRELYQKIAECFDISEKD 91

Query: 81 I 81
          I
Sbjct: 92 I 92


>UniRef50_UPI0000F2CA50 Cluster: PREDICTED: similar to PDZ domain
           protein GIPC3; n=1; Monodelphis domestica|Rep:
           PREDICTED: similar to PDZ domain protein GIPC3 -
           Monodelphis domestica
          Length = 412

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 39  KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
           + +LVFH Q AHGSP G I GF+NV+ELY KIAE +  SP +I
Sbjct: 134 RPRLVFHTQLAHGSPTGKIEGFTNVRELYAKIAEAFGISPTEI 176


>UniRef50_Q18488 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 357

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 26/60 (43%), Positives = 38/60 (63%)

Query: 22  EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
           E++ S    V N       QL F CQ AHGSP+G+I  ++N++ELY+ IA+C+  S +DI
Sbjct: 43  EESSSTIMTVVNPLMVAARQLKFACQMAHGSPVGIIDKWNNMEELYQSIADCFTISKDDI 102


>UniRef50_O14908 Cluster: PDZ domain-containing protein GIPC1;
          n=55; Eumetazoa|Rep: PDZ domain-containing protein
          GIPC1 - Homo sapiens (Human)
          Length = 333

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 24/43 (55%), Positives = 30/43 (69%)

Query: 39 KSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
          + +LVFH Q AHGSP G I GF+NVKELY KIAE +     ++
Sbjct: 55 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEV 97


>UniRef50_Q5DI42 Cluster: SJCHGC06361 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC06361 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 328

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 44 FHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
          F CQ AHGSP G+I GF  V++L+ KI+EC++ +P  I
Sbjct: 34 FFCQLAHGSPTGIIHGFRTVRQLHTKISECFDINPSQI 71


>UniRef50_UPI00005848B6 Cluster: PREDICTED: similar to GIPC1
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to GIPC1 protein - Strongylocentrotus
           purpuratus
          Length = 369

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query: 24  TESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
           T  + + ++N+   +  +LVF    AHGSP   + GF+NVKELYEKI E +     +I
Sbjct: 62  TPGKQSTMNNAPPPKPQRLVFSAFLAHGSPPAKVEGFTNVKELYEKIGEGFSMPASEI 119


>UniRef50_Q5B726 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 532

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 16/59 (27%), Positives = 27/59 (45%)

Query: 22  EDTESQSNGVDNSNGTQKSQLVFHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPED 80
           E  +S+S+   N     + + V  C Q  G+ L L     N ++ + +     EF+PED
Sbjct: 62  EQDKSESDNRQNLQEGPEPKAVKDCPQTPGNRLPLADLIGNAEDAFSRAPMAQEFTPED 120


>UniRef50_UPI00006CB800 Cluster: hypothetical protein
           TTHERM_00578810; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00578810 - Tetrahymena
           thermophila SB210
          Length = 1408

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 26  SQSNGVDNSNGTQKSQLV-FHCQQAHGSPLGLISGFSNVKELYEKIAECYEFSPEDI 81
           S  +G D  N  Q  Q   F  Q  + S  GL+   ++ K+L  K   C++F+ + I
Sbjct: 724 SSGSGEDKLNFNQSRQFFDFQIQMQNESQNGLVQSINDNKQLLNKDYSCFQFNLQPI 780


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.311    0.129    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,393,728
Number of Sequences: 1657284
Number of extensions: 2119497
Number of successful extensions: 3943
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3936
Number of HSP's gapped (non-prelim): 8
length of query: 81
length of database: 575,637,011
effective HSP length: 60
effective length of query: 21
effective length of database: 476,199,971
effective search space: 10000199391
effective search space used: 10000199391
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 65 (30.3 bits)