GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000395-TA|BGIBMGA000395-PA|IPR001569|Ribosomal protein
L37e
         (51 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40; Eutele...    54   5e-07
UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal ...    44   4e-04
UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9; Eukar...    44   4e-04
UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4; Pezizom...    42   0.003
UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A, cyt...    40   0.007
UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1; ...    39   0.017
UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe...    36   0.12 
UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90; Eukary...    36   0.12 
UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29; Fung...    36   0.12 
UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago ma...    33   0.82 

>UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40;
          Euteleostomi|Rep: 60S ribosomal protein L37 - Homo
          sapiens (Human)
          Length = 97

 Score = 54.0 bits (124), Expect = 5e-07
 Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 4  EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
          +Y+WS KA          MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 46 KYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal
           protein L37; n=3; Eutheria|Rep: PREDICTED: similar to
           ribosomal protein L37 - Canis familiaris
          Length = 124

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 4   EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
           +Y+W  KA          MRHLKIV  R R+GF+ G  P P + AVA+S
Sbjct: 73  KYNWGAKAKRRNTTGTGRMRHLKIVYHRCRHGFRGGTTPKPKRAAVAAS 121


>UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9;
          Eukaryota|Rep: 60S ribosomal protein L37-1 -
          Arabidopsis thaliana (Mouse-ear cress)
          Length = 95

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 5  YHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
          Y+WSVKA          MR+L+ V RRF+  F+EG + TP  KA ASS
Sbjct: 47 YNWSVKAIRRKTTGTGRMRYLRNVPRRFKTCFREGTQATPRNKAAASS 94


>UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4;
           Pezizomycotina|Rep: 60S ribosomal protein L37 -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 158

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 4   EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKP 41
           +Y+WS KA          M HLK V RRF+NGF+ G P
Sbjct: 112 KYNWSEKAKRRKTTGTGRMSHLKDVHRRFKNGFQVGTP 149


>UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A,
           cytosolic; n=1; Neurospora crassa|Rep: Probable
           ribosomal protein L37.e.A, cytosolic - Neurospora crassa
          Length = 124

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 4   EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKPTPPKKAVAS 50
           +Y+WS KA          +R+L  V R+F+NGF+ G P   K  VA+
Sbjct: 78  KYNWSEKAKRRKTTGTGRLRYLSTVSRKFKNGFQTGVPKGSKGPVAA 124


>UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1;
          Oryza sativa (indica cultivar-group)|Rep: Putative
          uncharacterized protein - Oryza sativa subsp. indica
          (Rice)
          Length = 89

 Score = 39.1 bits (87), Expect = 0.017
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 3  IEYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKPTPPKKAVA 49
          I  +WSVKA          MR+++ V +RF++ F+EG    P+K  A
Sbjct: 40 ISDNWSVKAIRRKTTGTGRMRYMRHVPKRFKSNFREGTEATPRKRAA 86


>UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe
           grisea 70-15|Rep: Ribosomal protein L37 - Magnaporthe
           grisea 70-15
          Length = 188

 Score = 36.3 bits (80), Expect = 0.12
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 4   EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKP 41
           +Y+WS KA          MR+L  V R+F+N F+ G P
Sbjct: 140 KYNWSEKAKRRKTTGTGRMRYLSTVTRKFKNDFQTGTP 177


>UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90;
          Eukaryota|Rep: 60S ribosomal protein L37 -
          Caenorhabditis elegans
          Length = 91

 Score = 36.3 bits (80), Expect = 0.12
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 5  YHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKPTP 43
          Y+W  K+           RHL+ V  RFRNGF+   P P
Sbjct: 47 YNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGTTPKP 85


>UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29;
          Fungi/Metazoa group|Rep: 60S ribosomal protein L37-B -
          Saccharomyces cerevisiae (Baker's yeast)
          Length = 88

 Score = 36.3 bits (80), Expect = 0.12
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 5  YHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG 39
          ++W+ KA          MR+LK V RRF+NGF+ G
Sbjct: 47 HNWAAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTG 81


>UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago
           maydis|Rep: Ribosomal protein L37 - Ustilago maydis
           (Smut fungus)
          Length = 125

 Score = 33.5 bits (73), Expect = 0.82
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 5   YHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG 39
           Y W  KA          MR+LK V RR +NGF+ G
Sbjct: 83  YEWGQKAKRRKTTGTGRMRYLKNVSRRAKNGFQTG 117


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.321    0.133    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,576,590
Number of Sequences: 1657284
Number of extensions: 1016389
Number of successful extensions: 1329
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1319
Number of HSP's gapped (non-prelim): 10
length of query: 51
length of database: 575,637,011
effective HSP length: 32
effective length of query: 19
effective length of database: 522,603,923
effective search space: 9929474537
effective search space used: 9929474537
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)