GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000395-TA|BGIBMGA000395-PA|IPR001569|Ribosomal protein
L37e
         (51 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37 pro...    54   7e-08
D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37 pro...    54   7e-08
CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.                54   7e-08
BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.        54   7e-08
BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37 p...    54   7e-08
AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37 p...    54   7e-08
S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37 pro...    52   4e-07
AB007183-1|BAA25842.1|   27|Homo sapiens ribosomal protein L37 p...    31   0.59 

>L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37
          protein.
          Length = 97

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 4  EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
          +Y+WS KA          MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 46 KYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37
          protein.
          Length = 97

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 4  EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
          +Y+WS KA          MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 46 KYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.
          Length = 97

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 4  EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
          +Y+WS KA          MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 46 KYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.
          Length = 97

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 4  EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
          +Y+WS KA          MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 46 KYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37
          protein.
          Length = 97

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 4  EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
          +Y+WS KA          MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 46 KYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37
          protein.
          Length = 97

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 4  EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
          +Y+WS KA          MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 46 KYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37
          protein.
          Length = 97

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 4  EYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 51
          +Y+WS KA          M HLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 46 KYNWSAKAKRRNTTGTGRMSHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>AB007183-1|BAA25842.1|   27|Homo sapiens ribosomal protein L37
          protein.
          Length = 27

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 14/27 (51%), Positives = 15/27 (55%)

Query: 6  HWSVKAXXXXXXXXXXMRHLKIVRRRF 32
          +WS KA          MRHLKIV RRF
Sbjct: 1  NWSAKAKRRNTTGTGRMRHLKIVYRRF 27


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.133    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,723,071
Number of Sequences: 224733
Number of extensions: 138121
Number of successful extensions: 186
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 178
Number of HSP's gapped (non-prelim): 8
length of query: 51
length of database: 73,234,838
effective HSP length: 31
effective length of query: 20
effective length of database: 66,268,115
effective search space: 1325362300
effective search space used: 1325362300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)