Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000394-TA|BGIBMGA000394-PA|IPR004130|Protein of unknown
function, ATP binding, IPR010760|Protein of unknown function DUF1337
(356 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical pr... 200 1e-51
AL033514-16|CAA22102.1| 272|Caenorhabditis elegans Hypothetical... 169 3e-42
U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon g... 89 3e-18
AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein. 89 3e-18
U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical pr... 36 0.044
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 33 0.31
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 33 0.31
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 33 0.41
AL033514-20|CAA22104.1| 696|Caenorhabditis elegans Hypothetical... 31 0.94
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 31 1.7
L16621-11|AAA28226.2| 192|Caenorhabditis elegans Hypothetical p... 31 1.7
AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical ... 30 2.2
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 30 2.9
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 30 2.9
Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 30 2.9
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC024753-4|AAL77191.1| 197|Caenorhabditis elegans Hypothetical ... 29 3.8
AC024753-3|AAK68428.1| 212|Caenorhabditis elegans Hypothetical ... 29 3.8
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 5.0
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 5.0
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 29 5.0
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 29 5.0
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 29 5.0
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 29 6.7
AL034489-10|CAA22464.2| 272|Caenorhabditis elegans Hypothetical... 29 6.7
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical p... 28 8.8
U64858-9|AAB18288.2| 398|Caenorhabditis elegans Hypothetical pr... 28 8.8
>U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical
protein B0207.6 protein.
Length = 268
Score = 200 bits (488), Expect = 1e-51
Identities = 97/262 (37%), Positives = 150/262 (57%), Gaps = 4/262 (1%)
Query: 13 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 72
YG LV+G PGAGK+T+C ++D+ R + +NLDPANDTM Y PD++I E+I + +V
Sbjct: 2 YGVLVIGAPGAGKSTFCAGLTDIFSQTKRPFLTINLDPANDTMAYAPDVNITEMITVNDV 61
Query: 73 MEQIDLGPNGALLYCMEYLESNIDWLLNQLHGDNGTTFLFDLPGQVELYCHHKSLSNIVS 132
M+++ LGPNGAL YC+E L +N +WLL ++ ++ + D PGQ+ELY L ++
Sbjct: 62 MDRLGLGPNGALKYCIETLGANCNWLLQKIEANHKKYLIIDCPGQLELYKSEGELWKVI- 120
Query: 133 KLTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKHYE 192
+ S + LC +HL DS +CSD KFI + +P +N L+K+DL E
Sbjct: 121 RFLEKSGVRLCALHLADSLYCSDPSKFISVALSTLATMVTMEMPQVNCLSKADLFS---E 177
Query: 193 KLNFGLDFYTEVXXXXXXXXXXXXXXFTNKYKKLNSAFISIIEDYSLVTFQLVNMMNEKS 252
+ L+F++ + KY+KLN A +I D+ LV+F + + N++S
Sbjct: 178 DGTYDLEFFSHLPDVNRLLDLLNEVPGLEKYRKLNEAICGVISDFDLVSFVPLAVENKES 237
Query: 253 LASVKNLVDKANGYVFKTEEDI 274
+ V +VD ANG+ + DI
Sbjct: 238 MMKVIQMVDAANGFSLTEQGDI 259
>AL033514-16|CAA22102.1| 272|Caenorhabditis elegans Hypothetical
protein Y75B8A.14 protein.
Length = 272
Score = 169 bits (410), Expect = 3e-42
Identities = 94/256 (36%), Positives = 142/256 (55%), Gaps = 8/256 (3%)
Query: 13 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 72
Y QLV+GP G+GK+TYC M + + GR + +VNLDPA + NY +D+R+LI + +V
Sbjct: 3 YAQLVMGPAGSGKSTYCSVMYNHCLSTGRTLRMVNLDPACEVFNYPAVVDVRDLISVNDV 62
Query: 73 ME--QIDLGPNGALLYCMEYLESNIDWLLNQLHGDNGTTFLFDLPGQVELYCHHKSLSNI 130
E ++ LGPNGAL++CMEYL N++WL ++L F+ D PGQ+ELY H + I
Sbjct: 63 QEDEELILGPNGALVFCMEYLVQNLEWLHDELDEGEDDYFVIDCPGQIELYSHLPVMRQI 122
Query: 131 VSKLTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKH 190
V L + + +C V LID++ DA KFI I P IN+LTK DLL +
Sbjct: 123 VDALKS-WDFNVCSVFLIDTNFVLDAEKFISGALTALSAMVAIETPAINVLTKMDLLSER 181
Query: 191 YEKLNFGLDFYTEVXXXXXXXXXXXXXXFTNKYKKLNSAFISIIEDYSLVTFQLVNMMNE 250
++L +D + E + +K++KL ++EDYS+V F +N +E
Sbjct: 182 NKQL---VDEFLE--TDTRSIVDQDETVWNSKHRKLTRTIAQVLEDYSIVKFVPLNCEDE 236
Query: 251 KSLASVKNLVDKANGY 266
+S+ + +D Y
Sbjct: 237 ESIDQLLLTIDTTIQY 252
>U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon gene
protein 2 protein.
Length = 355
Score = 89.4 bits (212), Expect = 3e-18
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 75
LVLG G+GKTT+ +++ L ++NLDPA + Y ++DIR+ + +EVM++
Sbjct: 34 LVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVMKE 93
Query: 76 IDLGPNGALLYCMEYLESNIDWLLNQLH--GDNGTTFLFDLPGQVELYCHHKSLSNIVSK 133
+GPNGA++ C+ + + D ++ ++ + + L D PGQ+E + S S I
Sbjct: 94 FGMGPNGAIMTCLNLMCTRFDKVIELINKRSSDFSVCLLDTPGQIEAFTWSASGSIITDS 153
Query: 134 LTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLK 188
L S+ V++++DS ++ F+ LP I + K+D++K
Sbjct: 154 L--ASSHPTVVMYIVDSARATNPTTFMSNMLYACSILYRTKLPFIVVFNKADIVK 206
>AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein.
Length = 355
Score = 89.4 bits (212), Expect = 3e-18
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 75
LVLG G+GKTT+ +++ L ++NLDPA + Y ++DIR+ + +EVM++
Sbjct: 34 LVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVMKE 93
Query: 76 IDLGPNGALLYCMEYLESNIDWLLNQLH--GDNGTTFLFDLPGQVELYCHHKSLSNIVSK 133
+GPNGA++ C+ + + D ++ ++ + + L D PGQ+E + S S I
Sbjct: 94 FGMGPNGAIMTCLNLMCTRFDKVIELINKRSSDFSVCLLDTPGQIEAFTWSASGSIITDS 153
Query: 134 LTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLK 188
L S+ V++++DS ++ F+ LP I + K+D++K
Sbjct: 154 L--ASSHPTVVMYIVDSARATNPTTFMSNMLYACSILYRTKLPFIVVFNKADIVK 206
>U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical
protein B0507.7 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.044
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 274 ILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLH-QYND-----IKD 327
I+ Q++ + K +EI + +E++ +D+ E LQ Q+L Q ND +K+
Sbjct: 6 IIFRQIKNKNNAEKLKQQKEINEEYLELKRNLDKTEIEGELQFQMLEKQQNDSQKEKLKN 65
Query: 328 AAQIVINHVANMEGTTVKE-IHDRLNL 353
++N +AN+ K+ + D+ NL
Sbjct: 66 TETAILNGIANLAKLRAKQSLDDQFNL 92
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 33.1 bits (72), Expect = 0.31
Identities = 28/129 (21%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 224 KKLNSAFISIIEDYSLVTFQLVNMMNE-KSLASVKNLVDKANGYVFKTEEDILKGQLRKS 282
+KLN ++ S +T QL +M + LA K D+ K +D L+ LRK+
Sbjct: 919 EKLNQLKATLESKLSDITGQLEDMQERNEDLARQKKKTDQELSDTKKHVQD-LELSLRKA 977
Query: 283 EKHQMSKSN--REIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANME 340
E+ + S+ + R + +++ + + +L +EK Q + + N+ + + +NH+ +
Sbjct: 978 EQEKQSRDHNIRSLQDEMANQDEAVAKLNKEKKHQEESNRKLNEDLQSEEDKVNHLEKIR 1037
Query: 341 GTTVKEIHD 349
+++ +
Sbjct: 1038 NKLEQQMDE 1046
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 33.1 bits (72), Expect = 0.31
Identities = 28/129 (21%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 224 KKLNSAFISIIEDYSLVTFQLVNMMNE-KSLASVKNLVDKANGYVFKTEEDILKGQLRKS 282
+KLN ++ S +T QL +M + LA K D+ K +D L+ LRK+
Sbjct: 919 EKLNQLKATLESKLSDITGQLEDMQERNEDLARQKKKTDQELSDTKKHVQD-LELSLRKA 977
Query: 283 EKHQMSKSN--REIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANME 340
E+ + S+ + R + +++ + + +L +EK Q + + N+ + + +NH+ +
Sbjct: 978 EQEKQSRDHNIRSLQDEMANQDEAVAKLNKEKKHQEESNRKLNEDLQSEEDKVNHLEKIR 1037
Query: 341 GTTVKEIHD 349
+++ +
Sbjct: 1038 NKLEQQMDE 1046
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 32.7 bits (71), Expect = 0.41
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLK 37
LVLGPP AGKTT C ++D ++
Sbjct: 32 LVLGPPKAGKTTLCTFLADFME 53
>AL033514-20|CAA22104.1| 696|Caenorhabditis elegans Hypothetical
protein Y75B8A.19 protein.
Length = 696
Score = 31.5 bits (68), Expect = 0.94
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 243 QLVNMMNEKSLASVKNLVDKANGYVFKTEEDILK 276
Q + MN++ +KNL D+ + Y++ T DILK
Sbjct: 110 QATHAMNQEYTVKMKNLNDQIDAYIYDTHLDILK 143
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 17 VLGPPGAGKTTYCIKMSDML 36
VLGPPG+GK T C K+ + L
Sbjct: 7 VLGPPGSGKGTICAKIQENL 26
>L16621-11|AAA28226.2| 192|Caenorhabditis elegans Hypothetical
protein ZK688.1 protein.
Length = 192
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/23 (52%), Positives = 20/23 (86%)
Query: 291 NREIYNKLIEIEMRIDRLLQEKH 313
NR IY+K+IEIE RI+R+ ++++
Sbjct: 49 NRTIYHKIIEIEKRIERIEEKEN 71
>AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical
protein ZK380.2 protein.
Length = 495
Score = 30.3 bits (65), Expect = 2.2
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 235 EDYSLVTFQLVNMMNE--KSLASV-KNLVDKANGYVFKTEE-DILKGQLRKSEKHQMSKS 290
EDY VT + V+++ E K + + KN + + K E +L+ QL +E ++K+
Sbjct: 166 EDYFSVTDEYVSLLQEIDKEIEILEKNSAFEESLLQEKDERIGLLETQLHAAEAINVAKA 225
Query: 291 NREIYNKLIEIEMRIDRL 308
N E+Y K E + RID L
Sbjct: 226 NHELY-KCQEKDRRIDNL 242
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 269 KTEEDILKGQLR-KSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKD 327
+ E +I + +L+ + + + +SK + + IE + LL+E+ L+++ Q+N+++
Sbjct: 227 RRESEIGELKLKAQGDANLISKLQAMLRKCISRIEELEEDLLEERKLRMKAERQFNELRS 286
Query: 328 AAQIVINHVANMEGTTVKEIH 348
+++ +A G E H
Sbjct: 287 EYEVLQEQMAEASGQLTAEAH 307
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/81 (20%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 269 KTEEDILKGQLR-KSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKD 327
+ E +I + +L+ + + + +SK + + IE + LL+E+ L+++ Q+N+++
Sbjct: 1072 RRESEIGELKLKAQGDANLISKLQAMLRKCISRIEELEEDLLEERKLRMKAERQFNELRS 1131
Query: 328 AAQIVINHVANMEGTTVKEIH 348
+++ +A G E H
Sbjct: 1132 EYEVLQEQMAEASGQLTAEAH 1152
>Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/77 (22%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 250 EKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLL 309
E+ A + L++ N + F+ +E ++G+ + ++ + + ++ L E+E +DR
Sbjct: 310 EEVQAENRKLLEDKNTHDFELDEAKVQGEHLEKQRKEAWEKVEQLQEMLGELEAELDR-- 367
Query: 310 QEKHLQVQLLHQYNDIK 326
+K L++QL D++
Sbjct: 368 -QKELKLQLEKDMEDLR 383
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/77 (22%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 250 EKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLL 309
E+ A + L++ N + F+ +E ++G+ + ++ + + ++ L E+E +DR
Sbjct: 310 EEVQAENRKLLEDKNTHDFELDEAKVQGEHLEKQRKEAWEKVEQLQEMLGELEAELDR-- 367
Query: 310 QEKHLQVQLLHQYNDIK 326
+K L++QL D++
Sbjct: 368 -QKELKLQLEKDMEDLR 383
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 29.5 bits (63), Expect = 3.8
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 232 SIIEDYSLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSN 291
++ E S + QL MNEK +AS K V+ + + DI Q EK++ S +
Sbjct: 1100 TLTESLSQLQVQL-QQMNEKLVASDKYAVEVEQ----QAQHDITVIQ---EEKNEQSAAL 1151
Query: 292 REIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDI----KDAAQIVINHVANMEG 341
E +K+ E+E ++ R +E ++ ++D+ KDA + + + ++G
Sbjct: 1152 EEALSKIAELEEQLGRAQKEIVRLEKVCDDFDDVERELKDAISKLQSEIKQLKG 1205
>AC024753-4|AAL77191.1| 197|Caenorhabditis elegans Hypothetical
protein Y23H5B.7b protein.
Length = 197
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 269 KTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYN----D 324
+T I+ Q+ ++SK+++++Y K+ + + +L+ + H Y D
Sbjct: 27 RTALKIVVNQMDIQSTLKLSKTSKKMYEKMKNAKRNVYKLIIDNHTDNPRNGFYKIARLD 86
Query: 325 IKDAAQIVINHVANMEGTTVK 345
I DA QI + + NM+ ++
Sbjct: 87 IVDAGQITLEDLLNMDCEVIR 107
>AC024753-3|AAK68428.1| 212|Caenorhabditis elegans Hypothetical
protein Y23H5B.7a protein.
Length = 212
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 269 KTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYN----D 324
+T I+ Q+ ++SK+++++Y K+ + + +L+ + H Y D
Sbjct: 27 RTALKIVVNQMDIQSTLKLSKTSKKMYEKMKNAKRNVYKLIIDNHTDNPRNGFYKIARLD 86
Query: 325 IKDAAQIVINHVANMEGTTVK 345
I DA QI + + NM+ ++
Sbjct: 87 IVDAGQITLEDLLNMDCEVIR 107
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 244 LVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEM 303
L+NM+ ++ L +N + ++ E +LK +LR+ ++ + S+ ++ K+ E
Sbjct: 66 LINMLEDR-LNQAENQIQD-----YRDENTVLKCELRELQETTFATSDEKLREKIRTTEG 119
Query: 304 RIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANMEGTTVKEIHDRLNLANK 356
D L++E QL + D++ + + + E +E+ L L K
Sbjct: 120 LCDELMEENE---QLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELELNAK 169
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 244 LVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEM 303
L+NM+ ++ L +N + ++ E +LK +LR+ ++ + S+ ++ K+ E
Sbjct: 66 LINMLEDR-LNQAENQIQD-----YRDENTVLKCELRELQETTFATSDEKLREKIRTTEG 119
Query: 304 RIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANMEGTTVKEIHDRLNLANK 356
D L++E QL + D++ + + + E +E+ L L K
Sbjct: 120 LCDELMEENE---QLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELELNAK 169
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 244 LVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEM 303
L+NM+ ++ L +N + ++ E +LK +LR+ ++ + S+ ++ K+ E
Sbjct: 66 LINMLEDR-LNQAENQIQD-----YRDENTVLKCELRELQETTFATSDEKLREKIRTTEG 119
Query: 304 RIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANMEGTTVKEIHDRLNLANK 356
D L++E QL + D++ + + + E +E+ L L K
Sbjct: 120 LCDELMEENE---QLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELELNAK 169
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 220 TNKYKKLNSAFISIIEDYSLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQL 279
TN K+ ++ + + + L V+ + +K+ + L + N + + + +K +L
Sbjct: 297 TNDIKRHEASHVEELAKWKLA----VSAVEKKNKTLIGELNELKNQLESRNDYEAIKNEL 352
Query: 280 R---KSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQ 317
R + E +++N E +L E +DRLL EK+ ++Q
Sbjct: 353 RLLREIEFGDSAEANAESIERLGETVETLDRLLAEKNRRLQ 393
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 220 TNKYKKLNSAFISIIEDYSLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQL 279
TN K+ ++ + + + L V+ + +K+ + L + N + + + +K +L
Sbjct: 297 TNDIKRHEASHVEELAKWKLA----VSAVEKKNKTLIGELNELKNQLESRNDYEAIKNEL 352
Query: 280 R---KSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQ 317
R + E +++N E +L E +DRLL EK+ ++Q
Sbjct: 353 RLLREIEFGDSAEANAESIERLGETVETLDRLLAEKNRRLQ 393
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 220 TNKYKKLNSAFISIIEDYSLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQL 279
TN K+ ++ + + + L V+ + +K+ + L + N + + + +K +L
Sbjct: 297 TNDIKRHEASHVEELAKWKLA----VSAVEKKNKTLIGELNELKNQLESRNDYEAIKNEL 352
Query: 280 R---KSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQ 317
R + E +++N E +L E +DRLL EK+ ++Q
Sbjct: 353 RLLREIEFGDSAEANAESIERLGETVETLDRLLAEKNRRLQ 393
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 17 VLGPPGAGKTTYCIKMSDML 36
VLGPPG+GK T C ++ + L
Sbjct: 7 VLGPPGSGKGTICTQIHENL 26
>AL034489-10|CAA22464.2| 272|Caenorhabditis elegans Hypothetical
protein Y7A5A.3 protein.
Length = 272
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 248 MNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSE--KHQMSKSNREIY 295
M ++ +K + D+ Y++ T DILK ++ + K+ +K+N EI+
Sbjct: 1 MKQEYTIGIKTVNDRIGAYIYDTHLDILKVTDKRGDHLKNTTTKTNVEIF 50
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIREL 66
G L+ GPPG GKT ++ ML R+ IVN D + + ++R+L
Sbjct: 332 GILLFGPPGTGKTLMARQIGKMLN--AREPKIVNGPQILDKYVGESESNVRKL 382
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIREL 66
G L+ GPPG GKT ++ ML R+ IVN D + + ++R+L
Sbjct: 332 GILLFGPPGTGKTLMARQIGKMLN--AREPKIVNGPQILDKYVGESESNVRKL 382
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIREL 66
G L+ GPPG GKT ++ ML R+ IVN D + + ++R+L
Sbjct: 266 GILLFGPPGTGKTLMARQIGKMLN--AREPKIVNGPQILDKYVGESESNVRKL 316
>Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical
protein ZK637.5 protein.
Length = 342
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 19 GPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
G G GKTT ++ L + +V++++ DPA++
Sbjct: 25 GKGGVGKTTCSCSLAAQLSKVRERVLLISTDPAHN 59
>U64858-9|AAB18288.2| 398|Caenorhabditis elegans Hypothetical
protein C16D9.1 protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 249 NEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRL 308
++KSL + +DK++ V DI KG + SE ++ S+S+ E+ E L
Sbjct: 184 DDKSLYLENSCLDKSDKSVVVKTSDIFKGSSKFSE-NESSRSDGELEPLKTEKTTLSSIL 242
Query: 309 LQEKHLQVQL 318
H+ +QL
Sbjct: 243 SSSTHMDIQL 252
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.137 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,017,123
Number of Sequences: 27539
Number of extensions: 315394
Number of successful extensions: 1081
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1055
Number of HSP's gapped (non-prelim): 38
length of query: 356
length of database: 12,573,161
effective HSP length: 82
effective length of query: 274
effective length of database: 10,314,963
effective search space: 2826299862
effective search space used: 2826299862
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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