Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000394-TA|BGIBMGA000394-PA|IPR004130|Protein of unknown
function, ATP binding, IPR010760|Protein of unknown function DUF1337
(356 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 205 8e-54
SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces... 166 4e-42
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 87 3e-18
SPBC409.03 |swi5||Swi5 protein|Schizosaccharomyces pombe|chr 2||... 38 0.002
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 33 0.062
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.11
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 31 0.19
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 29 1.3
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 29 1.3
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 1.3
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 1.7
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 28 2.3
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 2.3
SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|... 27 4.0
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 27 4.0
SPBC428.18 |cdt1||replication licensing factor Cdt1|Schizosaccha... 27 4.0
SPAC4F8.07c |hxk2||hexokinase 2 |Schizosaccharomyces pombe|chr 1... 27 5.3
SPAC23C4.17 |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 27 5.3
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 26 7.1
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 26 7.1
SPAC1142.06 |get3||GET complex ATPase subunit Get3 |Schizosaccha... 26 7.1
SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr 3... 26 7.1
SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr 1|||... 26 7.1
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 26 9.3
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 9.3
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 26 9.3
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 26 9.3
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 205 bits (500), Expect = 8e-54
Identities = 98/258 (37%), Positives = 152/258 (58%), Gaps = 1/258 (0%)
Query: 15 QLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVME 74
Q+V+GPPG+GK+TYC M +L +GR IIVNLDPAND + Y IDIR+++ +E + +
Sbjct: 5 QVVVGPPGSGKSTYCFGMYQLLSAIGRSSIIVNLDPANDFIKYPCAIDIRKVLDVEMIQK 64
Query: 75 QIDLGPNGALLYCMEYLESNIDWLLNQLHGDNGTTFLFDLPGQVELYCHHKSLSNIVSKL 134
DLGPNGAL+Y ME +E +++WLL +L + +FD PGQVEL+ +H SL I+ L
Sbjct: 65 DYDLGPNGALIYAMEAIEYHVEWLLKELKKHRDSYVIFDCPGQVELFTNHNSLQKIIKTL 124
Query: 135 TNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKHYEKL 194
+ V L+D++ C++ ++ + +PH+N+L+K+DLL Y L
Sbjct: 125 EKELDYRPVSVQLVDAYCCTNPSAYVSALLVCLKGMLQLDMPHVNILSKADLLCT-YGTL 183
Query: 195 NFGLDFYTEVXXXXXXXXXXXXXXFTNKYKKLNSAFISIIEDYSLVTFQLVNMMNEKSLA 254
LDF+TEV +Y LN A ++ED++LV+F++V + N+ S+
Sbjct: 184 PMKLDFFTEVQDLSYLAPLLDRDKRLQRYSDLNKAICELVEDFNLVSFEVVAVENKASML 243
Query: 255 SVKNLVDKANGYVFKTEE 272
V +D+A GY + + E
Sbjct: 244 RVLRKIDQAGGYAYGSTE 261
>SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 276
Score = 166 bits (404), Expect = 4e-42
Identities = 86/248 (34%), Positives = 135/248 (54%), Gaps = 4/248 (1%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQI 76
V G +GK+T+C + +K++GR +VNLDPA + ++P +DIR+LI +++VME++
Sbjct: 8 VCGVASSGKSTFCGALMSYMKSVGRSCHLVNLDPAAENFEWEPTVDIRDLISIDDVMEEL 67
Query: 77 DLGPNGALLYCMEYLESNIDWLLNQLHGDNGTTFL-FDLPGQVELYCHHKSLSNIVSKLT 135
D GPNG L+YC E+L N+DWL N+ GD +L FD+PGQ+ELY H L ++ L
Sbjct: 68 DYGPNGGLIYCFEFLMENLDWL-NEEIGDYDEDYLIFDMPGQIELYTHVPILPALIRHLQ 126
Query: 136 NVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKHYEKLN 195
N C V+L++S D KF + +PHINLL+K DLLK +
Sbjct: 127 VTLNFRPCAVYLLESQFLVDRTKFFAGVLSAMSAMVMMEVPHINLLSKMDLLKDNNNITK 186
Query: 196 FGLDFYTEVXXXXXXXXXXXXXXFTNKYKKLNSAFISIIEDYSLVTFQLVNMMNEKSLAS 255
L + K+ +LN + +I+D+++V F + NE+S++
Sbjct: 187 AELKRFLNTDPLLLTGEINETT--NPKFHELNRCIVQLIDDFNMVNFLPLESGNEESVSR 244
Query: 256 VKNLVDKA 263
V + +D A
Sbjct: 245 VLSYIDDA 252
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 87.4 bits (207), Expect = 3e-18
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 1 MTNKRFKPTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPD 60
MT+K KP +V+G G+GKTT+ +++ L + + I+NLDPA + Y+ +
Sbjct: 1 MTDKEKKPCAI----IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
Query: 61 IDIRELIVLEEVMEQIDLGPNGALLYCMEYLESNIDWLLNQLHGDNGTT--FLFDLPGQV 118
IDIR+ I +EVM+Q +LGPNG ++ + + D +L L T L D PGQ+
Sbjct: 57 IDIRDTINYKEVMKQYNLGPNGGIMTSLNLFVTKFDQVLKILEKRAPTVDHILIDTPGQI 116
Query: 119 ELYCHHKSLSNIVSKLTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHI 178
E++ S S I L S+ C+ +++D+ + ++ LP I
Sbjct: 117 EIFQWSASGSIICDTL--ASSWPTCIAYVVDTPRATSTSTWMSSMLYACSMLYKAKLPLI 174
Query: 179 NLLTKSDLLKKHYEK 193
+ K D+ + K
Sbjct: 175 IVYNKCDVQDSEFAK 189
>SPBC409.03 |swi5||Swi5 protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 85
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 279 LRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVAN 338
L + +K Q+ S + + L +++ R + +KH + LLH YN+I+D A +I VA
Sbjct: 12 LLEQQKEQLESS---LQDALAKLKNRDAKQTVQKH--IDLLHTYNEIRDIALGMIGKVAE 66
Query: 339 MEGTTVKEIHDRLNL 353
E T E+ DR +
Sbjct: 67 HEKCTSVELFDRFGV 81
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 33.1 bits (72), Expect = 0.062
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 255 SVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHL 314
+VKN V + F EE++L ++RK E Q + N EI + E++++I L++ K
Sbjct: 718 TVKNFVHLLDDTNFDFEEEVLLEKMRK-EIVQQVRDNEEIEVHINELDVKIALLVKNKIS 776
Query: 315 QVQLLHQYNDIKDAAQ 330
+L +N K Q
Sbjct: 777 LDDVLKHHNKYKFGKQ 792
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 32.3 bits (70), Expect = 0.11
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 233 IIEDYSLVTFQLVNMMNEKSLASVKN--LVDKANGYVFKTEEDILKGQLRKSEKHQMSKS 290
+IED S + N+ +E+ S+KN L + ++ + E ++ +S
Sbjct: 320 LIEDLSTRISEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKDSRTSNSQLEEEMVELKES 379
Query: 291 NREIYNKLIEIEMRIDRLLQE-KHLQVQLLHQYNDIKDAAQIV 332
NR I+++L + E ++ QE K L+ + N++ ++V
Sbjct: 380 NRTIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMV 422
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 31.5 bits (68), Expect = 0.19
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 249 NEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRL 308
N K L+ + LV + E IL Q +K EKH++ + NR+ + L++ ++R+ +
Sbjct: 366 NMKYLSKLDALVAFEDHVKHLEREYILDKQKQKKEKHRIERKNRDAFRALLQ-DLRVQKK 424
Query: 309 LQEKHLQVQLLHQYNDIKD 327
+ L+ + Y IKD
Sbjct: 425 IT---LRTKWKELYPIIKD 440
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDP---ANDTMNY-KPDIDIRELIVL 69
G L+ GPPG+GKT++ ++ L + ++NL +D +N+ ++ + +++L
Sbjct: 244 GYLLYGPPGSGKTSFLYALAG---ELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLL 300
Query: 70 EEV 72
E+V
Sbjct: 301 EDV 303
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 249 NEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRL 308
N+ ++ +K + + V + E + K K + ++S E+ +KL EI+M ++L
Sbjct: 346 NDLTVKKLKRRISELEMAVKEYESE--KSYSEKEYEEKISSLRIELEDKLAEIDMLRNKL 403
Query: 309 LQEKH 313
L+E+H
Sbjct: 404 LKEEH 408
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/94 (22%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 220 TNKYKKLNSAFISIIEDYSLVTFQLVNMMNEKSLASVKNL-VDKANGYVFKTEEDILKGQ 278
++KYK+L +++I+ DY + L N+ EK++ + KNL + + N + + ++++L Q
Sbjct: 964 SSKYKELEKDYLNIMADYQHSSQHLSNL--EKAI-NEKNLNIRELNEKLMRLDDELLLKQ 1020
Query: 279 LRKSEK-HQMSKSNREIYNKLIEIEMRIDRLLQE 311
K ++ + N + ++ E ++ L+ +
Sbjct: 1021 RSYDTKVQELREENASLKDQCRTYESQLASLVSK 1054
Score = 26.6 bits (56), Expect = 5.3
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 234 IEDYSLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNRE 293
I+++ ++ Q + +K + + NG+ + EE+ K + + M +
Sbjct: 1721 IDEFHVIRVQDLEEREKKDQLLFQRYQKELNGFKVQLEEEREKNLRIRQDNRHMHAEIGD 1780
Query: 294 IYNKLIEIEMRIDRLLQEKHL---QVQLLHQYNDIKDAAQ 330
I K E+ + LL+E + +Q L + N+ AQ
Sbjct: 1781 IRTKFDELVLEKTNLLKENSILQADLQSLSRVNNSSSTAQ 1820
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 238 SLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNK 297
+LV+ + + EK L + K+L + + Y EE + E + R K
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396
Query: 298 LIEIEMRIDRLLQE 311
+I+ + R+D+++ E
Sbjct: 397 IIQEKSRVDKMIDE 410
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 82 GALLYCMEYLESNIDWLLNQLHGDNGTTFLFDLPGQVELYCHHKSLSNIVSKLTNVS 138
G+ L LE N+D++ GDN T + +D +Y H + + LT+++
Sbjct: 799 GSALLVTPVLEPNVDYVRGVFPGDNSTIW-YDWYDHKVIYRQHNENITLSAPLTHIN 854
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 279 LRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIK 326
+ K + E N+L E+E + +L +E+ + +QL++ ND++
Sbjct: 14 MNKQTSLVLQNLKEETENQLKELEKKRSQLHKEEQINLQLVYAINDLR 61
>SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDP 50
+V GP G+GK+++ +++ L R + ++LDP
Sbjct: 335 MVCGPKGSGKSSFSRYITNRLLQQYRHIAYLDLDP 369
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVN 47
G L+ GPPG GKT ++ ML R+ IVN
Sbjct: 306 GILLYGPPGTGKTLIARQIGKMLN--AREPKIVN 337
>SPBC428.18 |cdt1||replication licensing factor
Cdt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 444
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 245 VNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLI 299
+N+ + +S +SV+N K + L ++RK +K +K E N L+
Sbjct: 279 INLKSHQSSSSVQNSSRKLTSSQLTLRQSSLFDRVRKKQKAMEAKKAEEFKNNLV 333
>SPAC4F8.07c |hxk2||hexokinase 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 455
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 232 SIIEDYSLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDIL 275
SI + +SL T L MM E+S +V+N++ + F+++E+ L
Sbjct: 316 SITDAWSLETSVLSRMMVERSAENVRNVLSTFK-FRFRSDEEAL 358
>SPAC23C4.17 |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 674
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 176 PHINLLTKSDLLKKHYEKLNFG 197
PH+ ++S +LKK +EK+ G
Sbjct: 612 PHVEQFSESGMLKKEFEKMPLG 633
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 128 SNIVSKLTNVSNMLLCVVHLIDSHHCSDAGKFI 160
S +VSK +SN+L V+ L + C+ K +
Sbjct: 106 SIVVSKFDRISNLLCSVIDLFEFVRCAHPDKMV 138
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 286 QMSKSNREIYNKLI--EIEMRIDRLLQEKHLQVQLLHQYNDIK 326
Q ++ E N L+ EIE R+ +L EK ++ H YND++
Sbjct: 186 QRKEAKVEEINTLLREEIEPRLTKLRTEKKTFLEYQHIYNDLE 228
>SPAC1142.06 |get3||GET complex ATPase subunit Get3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 19 GPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
G G GKTT ++ + + V++++ DPA++
Sbjct: 26 GKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHN 60
>SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 191
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 17 VLGPPGAGKTTYCIKMSD 34
VLG PGAGK T C ++++
Sbjct: 7 VLGGPGAGKGTQCDRLAE 24
>SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 26.2 bits (55), Expect = 7.1
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 22 GAGKTTYCIKMSDMLKTLGRQVIIVNLDP-ANDTMNYKPDIDIRELIVLEEVME-QIDLG 79
G GK +LKTLG +V + +DP N ++ E+ VL + E +DLG
Sbjct: 13 GIGKGVIASSTGLLLKTLGLKVTSIKIDPYMNIDAGTMSPLEHGEVFVLNDGGEVDLDLG 72
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVII 45
L+ GPPG GKT +++ L +++++
Sbjct: 229 LIHGPPGTGKTHTLVEIIQQLVLRNKRILV 258
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 233 IIEDYSLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKS 282
+ ED + +L N +NEK+LA K ++ + E D+L+ + +K+
Sbjct: 1296 VAEDTKSLGKELQNKINEKNLAEQKVEELQSQSFTKNKEVDLLRKKAQKA 1345
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1136
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 221 NKYKKLNSAFISIIEDYSLVTFQLVN 246
+K+ + F+S++ED+ LV+F L N
Sbjct: 712 SKFAGCDKLFLSLLEDWRLVSFLLEN 737
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 1 MTNKRFKPTQTFYGQL--VLGPPGAGKTTYCIKMSDML 36
MT PT Y + V+GP G+GKTT +S+ L
Sbjct: 1 MTVTPINPTNQPYKYVFVVIGPAGSGKTTMAKAVSEKL 38
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.137 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,513,339
Number of Sequences: 5004
Number of extensions: 60340
Number of successful extensions: 287
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 259
Number of HSP's gapped (non-prelim): 34
length of query: 356
length of database: 2,362,478
effective HSP length: 74
effective length of query: 282
effective length of database: 1,992,182
effective search space: 561795324
effective search space used: 561795324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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