Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000394-TA|BGIBMGA000394-PA|IPR004130|Protein of unknown
function, ATP binding, IPR010760|Protein of unknown function DUF1337
(356 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55252| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 1e-58
SB_19846| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 4e-07
SB_2807| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.066
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.12
SB_14425| Best HMM Match : LRR_1 (HMM E-Value=3.3e-12) 35 0.12
SB_38034| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.20
SB_4810| Best HMM Match : NACHT (HMM E-Value=1.4e-09) 33 0.27
SB_732| Best HMM Match : AAA (HMM E-Value=0) 33 0.47
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.82
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 32 0.82
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 32 0.82
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 1.1
SB_7413| Best HMM Match : ATP_bind_1 (HMM E-Value=0) 31 1.1
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 30 2.5
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 30 3.3
SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.3
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 3.3
SB_50853| Best HMM Match : Clp1 (HMM E-Value=1.2e-14) 29 4.4
SB_39357| Best HMM Match : SASP_gamma (HMM E-Value=1.7) 29 4.4
SB_37422| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17) 29 4.4
SB_25569| Best HMM Match : DUF600 (HMM E-Value=1.3) 29 4.4
SB_9099| Best HMM Match : SASP_gamma (HMM E-Value=1.7) 29 4.4
SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023) 29 4.4
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 4.4
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 29 7.6
SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41) 29 7.6
SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14) 29 7.6
>SB_55252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 223 bits (546), Expect = 1e-58
Identities = 109/216 (50%), Positives = 141/216 (65%), Gaps = 2/216 (0%)
Query: 32 MSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQIDLGPNGALLYCMEYL 91
M + L LGR+V ++NLDPAND + YK +DI LI L +VM+ + LGPNG L++CMEYL
Sbjct: 1 MLEFLTGLGRKVAVINLDPANDQLPYKCAVDISSLISLSDVMDNLKLGPNGGLIFCMEYL 60
Query: 92 ESNIDWLLNQLHGDNGTTFLFDLPGQVELYCHHKSLSNIVSKLTNVSNMLLCVVHLIDSH 151
E N+DWL NQL G F+FD PGQVELY HH S+ NIV +L + L+ VHL+DSH
Sbjct: 61 EKNLDWLENQLKALEGHYFVFDCPGQVELYTHHASVRNIVKQLEKWDSRLV-AVHLVDSH 119
Query: 152 HCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKHYEKLNFGLDFYTEVXXXXXXX 211
+CSD GKFI + LPHIN+L+K DL+ ++Y KL FGLD+YTEV
Sbjct: 120 YCSDPGKFISVLLTSLCTMIQVELPHINVLSKIDLI-ENYGKLAFGLDYYTEVLDLQFLV 178
Query: 212 XXXXXXXFTNKYKKLNSAFISIIEDYSLVTFQLVNM 247
F +KYKKLN A S++EDY LV+F +N+
Sbjct: 179 EHLNDSPFGSKYKKLNKALGSLVEDYGLVSFLTLNV 214
>SB_19846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 52.8 bits (121), Expect = 4e-07
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 13 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNY 57
+ QLV+GP G+GK+TYC + +T+GR V +VNLDPA + Y
Sbjct: 3 FAQLVMGPAGSGKSTYCSTIVKHCETIGRSVQVVNLDPAAEHFTY 47
>SB_2807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 35.5 bits (78), Expect = 0.066
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 19 GPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAN 52
GPPGAGK+T+ ML + G++V ++ +DP++
Sbjct: 128 GPPGAGKSTFIEFFGKMLTSKGQKVAVLAVDPSS 161
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 34.7 bits (76), Expect = 0.12
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 252 SLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQE 311
S S +NL+ + N V E D+ L K+E + +S +E +++++ R++ L++E
Sbjct: 1006 SNTSDQNLISELNSKVESLEADVAAKNLEKTELEKSLESTKE---RMVQLTERMESLVEE 1062
Query: 312 KHLQVQLLHQYNDIKDAAQIVINHVANME 340
K + +KD +++ V +E
Sbjct: 1063 KTNFAVVATHTRSMKDTIEVLQLQVRELE 1091
>SB_14425| Best HMM Match : LRR_1 (HMM E-Value=3.3e-12)
Length = 1356
Score = 34.7 bits (76), Expect = 0.12
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 75
LV+G PG GKT C ++ L V L A ++ DI+IR+L+ L +
Sbjct: 548 LVVGRPGIGKTMMCTRLL-RLWAESESSDEVALSIAFRNVSSTSDINIRDLLTLSTTTQG 606
Query: 76 IDLGPNGALLYCMEYLESNIDWLLNQLHG 104
+D + + Y + Y+ +N L+ L G
Sbjct: 607 LD---DNEISYILNYITANPSKLILCLDG 632
>SB_38034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 33.9 bits (74), Expect = 0.20
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 75
LV+G PG GKT C ++ L V L A ++ DI+IR L+ L +
Sbjct: 220 LVVGRPGIGKTMMCTRLL-RLWAESESSDEVALSIAFRNVSSTSDINIRNLLTLSTTTQG 278
Query: 76 IDLGPNGALLYCMEYLESNIDWLLNQLHG 104
+D + + Y + Y+ +N L+ L G
Sbjct: 279 LD---DNEISYILNYITANPSKLILCLDG 304
>SB_4810| Best HMM Match : NACHT (HMM E-Value=1.4e-09)
Length = 682
Score = 33.5 bits (73), Expect = 0.27
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 75
LV+G PG GKT C ++ L V L A ++ +I+IR+L+ L +
Sbjct: 267 LVVGRPGIGKTMMCTRLL-RLWAESESSDEVALSIAFRNVSSTSNINIRDLLTLSTTTQG 325
Query: 76 IDLGPNGALLYCMEYLESNIDWLLNQLHG 104
+D + + Y + Y+ +N L+ L G
Sbjct: 326 LD---DNEISYILNYITANPSKLILYLDG 351
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 32.7 bits (71), Expect = 0.47
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVM 73
G L+ GPPG GKT ++ ML T R+ I++ + + + +IR+L E
Sbjct: 184 GILLFGPPGTGKTLMARQIGTMLNT--REPKIISGPEVLNKFVGESEANIRKLFA-EAEE 240
Query: 74 EQIDLGPNGAL 84
EQ G N AL
Sbjct: 241 EQKRFGDNSAL 251
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 31.9 bits (69), Expect = 0.82
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 250 EKSLASVKNLVDKANGYVFKTEEDILKGQ--LRKSEKH--QMSKSNREIYNKLIEIEMRI 305
E SL V V + GY+ K E+ + + Q L+K ++ +M S + ++ IE I
Sbjct: 751 EYSLQEVTQDVQQKAGYIGKLEQALSERQTALQKEQERAREMQDSRLHLQQQVTLIEQEI 810
Query: 306 DRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANME--GTTVKEIHDRLNLAN 355
DR L+ +HQ +++A + + ++ +T++E+H + ++
Sbjct: 811 DRERNASQLETNEMHQ--KLQEARAELEKKTSELKELSSTMREMHQDMKTSS 860
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 31.9 bits (69), Expect = 0.82
Identities = 28/141 (19%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Query: 188 KKHYEKLNFGLDFYTEVXXXXXXXXXXXXXXFTNKYKKLNSAFISIIEDYSLVTFQLVNM 247
K+ E + FG E +T + ++L A E++++ T ++
Sbjct: 149 KRQGELIEFGDILKQEYAEKLVELEKQFLEKYTKEIEELKQALEEEKEEFTVAT---LDD 205
Query: 248 MNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIE-MRID 306
+ +K + + L D+ N + + +E K Q+R+S ++ + NR++ + +IE +R D
Sbjct: 206 LAQKHASEMMRLRDELNQLMVQADE--AKNQMRQSHMAEIEEMNRKMAREYQKIESLRAD 263
Query: 307 RLLQEKHLQVQLLHQYNDIKD 327
+ HQ +++D
Sbjct: 264 LEGAHNSSAQEHAHQLQELRD 284
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 31.9 bits (69), Expect = 0.82
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLG 40
L+ GPPG GKTT C K+ L + G
Sbjct: 55 LLTGPPGIGKTTLCSKVKQALASRG 79
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/80 (20%), Positives = 39/80 (48%)
Query: 244 LVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEM 303
++ M E+ +S + VD+ + E++ K Q + + ++ K+ + + NK+ E +
Sbjct: 818 VIQMKVEEVESSYMDAVDREKDLAGQLEDEREKNQFLQMDNEELKKTIKTLTNKVSEKQR 877
Query: 304 RIDRLLQEKHLQVQLLHQYN 323
+DRL + + + + N
Sbjct: 878 EVDRLENDMDVAAEKIISLN 897
>SB_7413| Best HMM Match : ATP_bind_1 (HMM E-Value=0)
Length = 299
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 111 LFDLPGQVELYCHHKSLSNIVSKLTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXX 170
+FD PGQ+E++ S S I L ++ + VV+++D + F+
Sbjct: 45 IFDTPGQIEVFTWSASGSIITEALASLFPTV--VVYMVDIPRSTSPVTFMSNMLYACSIL 102
Query: 171 XNIGLPHINLLTKSDLL 187
LP + +L K+D++
Sbjct: 103 YKTKLPFVVVLNKTDIV 119
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 280 RKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANM 339
R+ E KS R +L +M+I+ L+ + H +++ +++I +AN+
Sbjct: 812 RELELRVQQKSVRNTELELEVAKMKIENRQLVTQLKAKTSHN-TELQQEVEVLIKKLANV 870
Query: 340 EGTTVKEIHDRLNLANK 356
E VKE+ D + N+
Sbjct: 871 ENNQVKELRDWVREKNE 887
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 30.3 bits (65), Expect = 2.5
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 246 NMMNEKSLASVKNLVDKANGY---VFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIE 302
+M+ ++ A +++L+DK+N Y + K ED RK E+++ + ++ NKL + E
Sbjct: 636 DMVEQQRFARLQHLLDKSNIYCQFLLKRMED-----QRKEEENRQKRQEKKEENKLAKPE 690
Query: 303 MRIDRLLQEKHLQVQLLHQYNDIKDA 328
++ ++EK L + +D +D+
Sbjct: 691 QQVPE-VKEKRATRSGLKEASDSQDS 715
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 275 LKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQL 318
++ L KS + +M + RE + E +MRI+ + QEK Q+QL
Sbjct: 917 MRKSLSKSTRERMERKRREEEERAKE-QMRIEEIEQEKSKQLQL 959
>SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2653
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 13 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQ 42
+G +++GP G+GKTT + + D L +L Q
Sbjct: 278 HGVMLVGPTGSGKTTNYMMLQDTLTSLHEQ 307
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.9 bits (64), Expect = 3.3
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 245 VNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMR 304
V++ ++ L + K L D+A +F +E+I+K + +E +S+S ++ +K E+
Sbjct: 1834 VSLSIQEELVTSKQL-DEARDKIFVLKEEIIKADSQLAEHKGISESLKKTVSKKTEVIED 1892
Query: 305 IDRLLQEKHLQVQL 318
++R Q K+L+ +L
Sbjct: 1893 LNR--QIKYLEDEL 1904
>SB_50853| Best HMM Match : Clp1 (HMM E-Value=1.2e-14)
Length = 351
Score = 29.5 bits (63), Expect = 4.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLD 49
+V+GP GK+T C + + +GR+ I V+LD
Sbjct: 123 MVVGPTDVGKSTVCQLLLNYAVRMGRRPISVDLD 156
>SB_39357| Best HMM Match : SASP_gamma (HMM E-Value=1.7)
Length = 244
Score = 29.5 bits (63), Expect = 4.4
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 256 VKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQ 315
+++ DK V + D+L+G+L +S S+ ++ E RLLQE+ Q
Sbjct: 149 IQDAKDKDGRVVITEQVDVLRGKLEDMLVPLLSLSSSSALQLRLDTEHEEKRLLQEQFKQ 208
Query: 316 VQLLHQYNDIKDAAQIVINHVANMEGTTVKEIHDRLNLANK 356
+ KD + + +A + + ++ + + +AN+
Sbjct: 209 AE-----ETSKDEINQLKDEIAKILSEQLTKLQEEMGIANQ 244
>SB_37422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 267 VFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRI--DRLLQEKH 313
+FKT+ D+LKG+ E ++ K+ ++ + L+E E+RI +R L E++
Sbjct: 79 IFKTKSDLLKGE----EAKRIVKNYNKMASVLVEFEVRISNNRRLAERN 123
>SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17)
Length = 473
Score = 29.5 bits (63), Expect = 4.4
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 256 VKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQ 315
+++ DK V + D+L+G+L +S S+ ++ E RLLQE+ Q
Sbjct: 241 IQDAKDKDGRVVITEQVDVLRGKLEDMLVPLLSLSSSSALQLRLDTEHEEKRLLQEQFKQ 300
Query: 316 VQLLHQYNDIKDAAQIVINHVANMEGTTVKEIHDRLNLANK 356
+ KD + + +A + + ++ + + +AN+
Sbjct: 301 AE-----ETSKDEINQLKDEIAKILSEQLTKLQEEMGIANQ 336
>SB_25569| Best HMM Match : DUF600 (HMM E-Value=1.3)
Length = 271
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 267 VFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRI--DRLLQEKH 313
+FKT+ D+LKG+ E ++ K+ ++ + L+E E+RI +R L E++
Sbjct: 223 IFKTKSDLLKGE----EAKRIVKNYNKMASVLVEFEVRISNNRRLAERN 267
>SB_9099| Best HMM Match : SASP_gamma (HMM E-Value=1.7)
Length = 200
Score = 29.5 bits (63), Expect = 4.4
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 256 VKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQ 315
+++ DK V + D+L+G+L +S S+ ++ E RLLQE+ Q
Sbjct: 105 IQDAKDKDGRVVITEQVDVLRGKLEDMLVPLLSLSSSSALQLRLDTEHEEKRLLQEQFKQ 164
Query: 316 VQLLHQYNDIKDAAQIVINHVANMEGTTVKEIHDRLNLANK 356
+ KD + + +A + + ++ + + +AN+
Sbjct: 165 AE-----ETSKDEINQLKDEIAKILSEQLTKLQEEMGIANQ 200
>SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023)
Length = 1901
Score = 29.5 bits (63), Expect = 4.4
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 263 ANGYVFKTEEDILKGQLRKSEKHQMSKSNREIY-------NKLIEIEMRIDRLLQEKHLQ 315
A G + EE+ Q+RK+ + + +N+EI +L E ID L+E L+
Sbjct: 1811 ATGNTLREEEERNTEQMRKNNEERSETTNQEILRSIDRKNEELSERNSVIDETLEENQLE 1870
Query: 316 VQLLHQYNDIKDAAQIV 332
+ L + +KD + +
Sbjct: 1871 RENLEERMSLKDRVKAI 1887
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.5 bits (63), Expect = 4.4
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 250 EKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLL 309
E S S KN+++ + KT ED+L R+ E ++ K ++++ +E +++ L
Sbjct: 535 ESSPDSKKNILEGLDLQDGKTVEDLLSDYRRELELYRQIKDENGTVSRIVNLEKQVNDLS 594
Query: 310 QEKHLQVQLLHQYNDIKD 327
E L D+KD
Sbjct: 595 GENS---SLKTTMGDVKD 609
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 271 EEDILKGQLRKSEKHQMSKSNREIYNKLI--EIEMRIDRLLQEKHLQVQLLHQYNDIKDA 328
E D+L + +++E+ K + K I E+E R+ ++ +EK+ + QL + D + A
Sbjct: 1217 EADLLIQRRKEAERKAEEKRKQIERQKRIDEEVERRLQKIAEEKNREEQLKKEKMDEEKA 1276
Query: 329 AQIVINHVANMEGTTVKEI 347
++ + A +E ++I
Sbjct: 1277 VELALK--AKLEAMAAQDI 1293
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.7 bits (61), Expect = 7.6
Identities = 19/82 (23%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 248 MNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDR 307
M KSL + N A G + E D + +R+ + + + N+E+ + + E++ +++
Sbjct: 133 MENKSLLNELNKALYAGGSEY--ESDTMTKSIREDNQTDLRRKNKELRSDVEELQEQVED 190
Query: 308 L--LQEKHLQVQLLHQYNDIKD 327
+ L +KH Q++ + +D++D
Sbjct: 191 MAALAKKHKQLKTRN--DDLQD 210
>SB_25472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1191
Score = 28.7 bits (61), Expect = 7.6
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 3 NKRFKPTQTFYGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDID 62
N FK ++T L+ G PG GKTT C K+ + L Q +N T + +++
Sbjct: 329 NDLFK-SKTKQHVLLEGNPGVGKTTLCKKLVNCW-ALSVQKHEQTEHSSNSTSPFPAEVE 386
Query: 63 IRELIVLEEVMEQID 77
I L+ E+++ D
Sbjct: 387 IVLLLKCREIIDTED 401
>SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41)
Length = 901
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 278 QLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQ 317
Q +S++ Q+S N+++ + I+ + ++ +LLQ + LQ Q
Sbjct: 665 QGNQSQRQQLSLHNQQMQQQQIQQQQQLQQLLQHQQLQKQ 704
>SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14)
Length = 1089
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 266 YVFKTEEDIL---KGQLRKSEKHQMSKSNREIYNKLIE-IEMRIDRLLQEKHLQVQLLHQ 321
YV + E + + + ++EK ++ RE + L++ + +++R Q H + LHQ
Sbjct: 497 YVMRLHEGMTLEERAEAERAEKRADWRNWRERLDDLLDRLRRKLERARQAPHSRQDCLHQ 556
Query: 322 YNDIKDAAQIVINH 335
D KD Q I H
Sbjct: 557 IEDAKD-CQDEIEH 569
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.137 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,422,813
Number of Sequences: 59808
Number of extensions: 379054
Number of successful extensions: 1568
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1541
Number of HSP's gapped (non-prelim): 47
length of query: 356
length of database: 16,821,457
effective HSP length: 83
effective length of query: 273
effective length of database: 11,857,393
effective search space: 3237068289
effective search space used: 3237068289
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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