Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000394-TA|BGIBMGA000394-PA|IPR004130|Protein of unknown
function, ATP binding, IPR010760|Protein of unknown function DUF1337
(356 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22370.1 68418.m02610 ATP-binding family protein contains Pfa... 247 1e-65
At4g12790.2 68417.m02007 ATP-binding family protein contains Pfa... 190 1e-48
At4g12790.1 68417.m02006 ATP-binding family protein contains Pfa... 190 1e-48
At4g21800.2 68417.m03154 ATP-binding family protein contains Pfa... 71 1e-12
At4g21800.1 68417.m03153 ATP-binding family protein contains Pfa... 71 1e-12
At4g30990.1 68417.m04398 expressed protein ; expression supporte... 35 0.072
At3g47780.1 68416.m05205 ABC transporter family protein transpor... 34 0.17
At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family pr... 32 0.51
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 32 0.51
At1g67370.1 68414.m07669 meiotic asynaptic mutant 1 (ASY1) ident... 32 0.51
At5g66005.2 68418.m08311 Expressed protein 32 0.67
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 32 0.67
At5g61740.1 68418.m07747 ABC transporter family protein ABC fami... 31 0.89
At5g61700.1 68418.m07741 ABC transporter family protein ABC fami... 31 0.89
At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative s... 31 0.89
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 31 1.2
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 31 1.2
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 31 1.6
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 31 1.6
At5g13790.1 68418.m01608 floral homeotic protein AGL-15 (AGL15) 31 1.6
At5g03940.1 68418.m00374 signal recognition particle 54 kDa prot... 31 1.6
At3g47750.1 68416.m05202 ABC transporter family protein probable... 31 1.6
At4g09960.1 68417.m01629 MADS-box protein (AGL11) 30 2.7
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 30 2.7
At1g54350.1 68414.m06196 ABC transporter family protein similar ... 30 2.7
At1g10760.1 68414.m01231 starch excess protein (SEX1) identical ... 30 2.7
At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family pr... 29 3.6
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 29 3.6
At3g47770.1 68416.m05204 ABC transporter family protein AbcA, Di... 29 3.6
At3g47760.1 68416.m05203 ABC transporter family protein probable... 29 3.6
At3g47740.1 68416.m05201 ABC transporter family protein ATP bind... 29 3.6
At3g10420.2 68416.m01250 sporulation protein-related similar to ... 29 3.6
At3g10420.1 68416.m01249 sporulation protein-related similar to ... 29 3.6
At1g79050.1 68414.m09217 DNA repair protein recA identical to DN... 29 3.6
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 29 4.7
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 29 4.7
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 29 4.7
At3g47790.1 68416.m05206 ABC transporter family protein contains... 29 6.3
At1g73170.1 68414.m08466 expressed protein 29 6.3
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 28 8.3
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 28 8.3
At2g37010.1 68415.m04539 ABC transporter family protein contains... 28 8.3
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 28 8.3
>At5g22370.1 68418.m02610 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 291
Score = 247 bits (604), Expect = 1e-65
Identities = 120/257 (46%), Positives = 163/257 (63%), Gaps = 2/257 (0%)
Query: 13 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 72
+GQ+V+GPPG+GKTTYC MS L +GR+V IVNLDPAND + Y+ ++I ELI LE+V
Sbjct: 3 FGQVVIGPPGSGKTTYCNGMSQFLSLMGRKVAIVNLDPANDALPYECGVNIEELIKLEDV 62
Query: 73 MEQIDLGPNGALLYCMEYLESNIDWLLNQLHG-DNGTTFLFDLPGQVELYCHHKSLSNIV 131
M + LGPNG L+YCMEYLE NIDWL ++L LFD PGQVEL+ H S N++
Sbjct: 63 MSEHSLGPNGGLVYCMEYLEKNIDWLESKLKPLLKDHYILFDFPGQVELFFIHDSTKNVL 122
Query: 132 SKLTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKHY 191
+KL N+ L V LIDSH C D G ++ ++ LPH+N+L+K DL+ Y
Sbjct: 123 TKLIKSLNLRLTAVQLIDSHLCCDPGNYVSSLLLSLSTMLHMELPHVNVLSKIDLIGS-Y 181
Query: 192 EKLNFGLDFYTEVXXXXXXXXXXXXXXFTNKYKKLNSAFISIIEDYSLVTFQLVNMMNEK 251
KL F LDFYT+V + KY+KL S+IEDYSLV F +++ +++
Sbjct: 182 GKLAFNLDFYTDVQDLSYLEHHLSQDPRSAKYRKLTKELCSVIEDYSLVNFTTLDIQDKE 241
Query: 252 SLASVKNLVDKANGYVF 268
S+ + L+DK+NGY+F
Sbjct: 242 SVGDLVKLIDKSNGYIF 258
>At4g12790.2 68417.m02007 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 271
Score = 190 bits (463), Expect = 1e-48
Identities = 103/251 (41%), Positives = 146/251 (58%), Gaps = 10/251 (3%)
Query: 13 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 72
Y QLV+GP G+GK+TYC + + +T+GR + +VNLDPA + NY +DIRELI LE+V
Sbjct: 3 YAQLVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDV 62
Query: 73 MEQIDLGPNGALLYCMEYLESNI-DWLLNQLHGDNGTTFL-FDLPGQVELYCHHKSLSNI 130
ME + LGPNGAL+YCMEYLE ++ DW+ +L +L FD PGQ+EL+ H L N
Sbjct: 63 MEDLKLGPNGALMYCMEYLEDSLHDWVDEELENYRDDDYLIFDCPGQIELFTHVPVLKNF 122
Query: 131 VSKLTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKH 190
V L N +CVV+L+DS +D KFI + LPH+N+L+K DLL+
Sbjct: 123 VEHLKQ-KNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLELPHVNILSKMDLLQ-- 179
Query: 191 YEKLNFGLDFYTEVXXXXXXXXXXXXXXFTNKYKKLNSAFISIIEDYSLVTFQLVNMMNE 250
+K N +D Y + +Y KLN A I ++ +Y +V F +N+ E
Sbjct: 180 -DKSN--IDDY--LNPEPRTLLAELNKRMGPQYAKLNKALIEMVGEYGMVNFIPINLRKE 234
Query: 251 KSLASVKNLVD 261
KS+ V + +D
Sbjct: 235 KSIQYVLSQID 245
>At4g12790.1 68417.m02006 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 271
Score = 190 bits (463), Expect = 1e-48
Identities = 103/251 (41%), Positives = 146/251 (58%), Gaps = 10/251 (3%)
Query: 13 YGQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 72
Y QLV+GP G+GK+TYC + + +T+GR + +VNLDPA + NY +DIRELI LE+V
Sbjct: 3 YAQLVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIRELISLEDV 62
Query: 73 MEQIDLGPNGALLYCMEYLESNI-DWLLNQLHGDNGTTFL-FDLPGQVELYCHHKSLSNI 130
ME + LGPNGAL+YCMEYLE ++ DW+ +L +L FD PGQ+EL+ H L N
Sbjct: 63 MEDLKLGPNGALMYCMEYLEDSLHDWVDEELENYRDDDYLIFDCPGQIELFTHVPVLKNF 122
Query: 131 VSKLTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKH 190
V L N +CVV+L+DS +D KFI + LPH+N+L+K DLL+
Sbjct: 123 VEHLKQ-KNFNVCVVYLLDSQFITDVTKFISGCMSSLAAMIQLELPHVNILSKMDLLQ-- 179
Query: 191 YEKLNFGLDFYTEVXXXXXXXXXXXXXXFTNKYKKLNSAFISIIEDYSLVTFQLVNMMNE 250
+K N +D Y + +Y KLN A I ++ +Y +V F +N+ E
Sbjct: 180 -DKSN--IDDY--LNPEPRTLLAELNKRMGPQYAKLNKALIEMVGEYGMVNFIPINLRKE 234
Query: 251 KSLASVKNLVD 261
KS+ V + +D
Sbjct: 235 KSIQYVLSQID 245
>At4g21800.2 68417.m03154 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 379
Score = 70.9 bits (166), Expect = 1e-12
Identities = 71/325 (21%), Positives = 134/325 (41%), Gaps = 17/325 (5%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 75
+V+G G+GKT++ ++ +VNLDPA ++ + +IDIR+ + +EVM+Q
Sbjct: 45 IVVGMAGSGKTSFLHRLVCHTFDSKSHGYVVNLDPAVMSLPFGANIDIRDTVKYKEVMKQ 104
Query: 76 IDLGPNGALLYCMEYLESNIDWLLN--QLHGDNGTTFLFDLPGQVELYCHHKSLSNIVSK 133
+LGPNG +L + + D +++ + D L D PGQ+E++ S S +
Sbjct: 105 YNLGPNGGILTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTW--SASGAIIT 162
Query: 134 LTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKHYEK 193
S V +++D+ S F+ LP + K+D + H
Sbjct: 163 EAFASTFPTVVTYVVDTPRSSSPITFMSNMLYACSILYKTRLPLVLAFNKTD-VADHKFA 221
Query: 194 LNFGLDFYTEVXXXXXXXXXXXXXXFTNK--------YKKLNSAFISIIEDYSL-VTFQL 244
L + DF EV N Y+ + S +S I + F+
Sbjct: 222 LEWMEDF--EVFQAAIQSDNSYTATLANSLSLSLYEFYRNIRSVGVSAISGAGMDGFFKA 279
Query: 245 VNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKH-QMSKSNREIYNKLIEIEM 303
+ E+ + + K +D + EE+ K ++ K K + S+ + N ++
Sbjct: 280 IEASAEEYMETYKADLDMRKADKERLEEERKKHEMEKLRKDMESSQGGTVVLNTGLKDRD 339
Query: 304 RIDRLLQEKHLQVQLLHQYNDIKDA 328
++++ E+ + + D DA
Sbjct: 340 ATEKMMLEEDDEDFQVEDEEDSDDA 364
>At4g21800.1 68417.m03153 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 379
Score = 70.9 bits (166), Expect = 1e-12
Identities = 71/325 (21%), Positives = 134/325 (41%), Gaps = 17/325 (5%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVMEQ 75
+V+G G+GKT++ ++ +VNLDPA ++ + +IDIR+ + +EVM+Q
Sbjct: 45 IVVGMAGSGKTSFLHRLVCHTFDSKSHGYVVNLDPAVMSLPFGANIDIRDTVKYKEVMKQ 104
Query: 76 IDLGPNGALLYCMEYLESNIDWLLN--QLHGDNGTTFLFDLPGQVELYCHHKSLSNIVSK 133
+LGPNG +L + + D +++ + D L D PGQ+E++ S S +
Sbjct: 105 YNLGPNGGILTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTW--SASGAIIT 162
Query: 134 LTNVSNMLLCVVHLIDSHHCSDAGKFIXXXXXXXXXXXNIGLPHINLLTKSDLLKKHYEK 193
S V +++D+ S F+ LP + K+D + H
Sbjct: 163 EAFASTFPTVVTYVVDTPRSSSPITFMSNMLYACSILYKTRLPLVLAFNKTD-VADHKFA 221
Query: 194 LNFGLDFYTEVXXXXXXXXXXXXXXFTNK--------YKKLNSAFISIIEDYSL-VTFQL 244
L + DF EV N Y+ + S +S I + F+
Sbjct: 222 LEWMEDF--EVFQAAIQSDNSYTATLANSLSLSLYEFYRNIRSVGVSAISGAGMDGFFKA 279
Query: 245 VNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKH-QMSKSNREIYNKLIEIEM 303
+ E+ + + K +D + EE+ K ++ K K + S+ + N ++
Sbjct: 280 IEASAEEYMETYKADLDMRKADKERLEEERKKHEMEKLRKDMESSQGGTVVLNTGLKDRD 339
Query: 304 RIDRLLQEKHLQVQLLHQYNDIKDA 328
++++ E+ + + D DA
Sbjct: 340 ATEKMMLEEDDEDFQVEDEEDSDDA 364
>At4g30990.1 68417.m04398 expressed protein ; expression supported
by MPSS
Length = 2138
Score = 35.1 bits (77), Expect = 0.072
Identities = 22/104 (21%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 231 ISIIEDYSLVTFQLVNMMNEKSL--ASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMS 288
I ++ SL+TF + ++S+ A KN++ N ++++ E+++ L E+H+
Sbjct: 342 IFALKSSSLLTFLREFLKKDQSVVKAFTKNILCAINNMIWESSEEVIPLLLTLCEEHKTQ 401
Query: 289 KSNREIYNKLIE-IEMRIDRLLQEKHLQVQLLHQYNDIKDAAQI 331
+++ ++ N + + E R +R+ + +++ + Q + AQI
Sbjct: 402 QTSHDVVNSISQTFESRYERIHEFLEAKIKKVQQNIENAGLAQI 445
>At3g47780.1 68416.m05205 ABC transporter family protein transport
protein ABC-C, Homo sapiens, PIR2:S71363
Length = 935
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
+LGP GAGKT++ M+ +LK ++ LD ND
Sbjct: 649 MLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICND 685
>At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family
protein / kinesin motor family protein kinesin,
Syncephalastrum racemosum, AJ225894
Length = 941
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 243 QLVNMMNEKSLASVKNLVDKANGYV-FKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEI 301
++VNM+ K ++L K V T E + +LR SEKH++ K RE N E
Sbjct: 440 KIVNMVKLKEEFDYESLCRKLETQVDHLTAEVERQNKLRNSEKHELEKRLRECENSFAEA 499
Query: 302 EMRI---DRLLQEKHLQVQL 318
E + L++++ +++L
Sbjct: 500 EKNAVTRSKFLEKENTRLEL 519
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVM 73
G L+ GPPG GK+T M++ L+ + + + ++ D + ++V+E++
Sbjct: 241 GYLLFGPPGTGKSTMISAMANFLEYDVYDLELTTVKDNSELKKLMLDTKGKSIVVIEDID 300
Query: 74 EQIDL 78
+DL
Sbjct: 301 CSLDL 305
>At1g67370.1 68414.m07669 meiotic asynaptic mutant 1 (ASY1)
identical to meiotic asynaptic mutant 1 [Arabidopsis
thaliana] GI:7939627; contains Pfam profiles PF02301:
DNA-binding HORMA domain, PF04433: SWIRM domain
Length = 596
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 233 IIEDYSLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNR 292
+IE+YS +F + ++ + ++ +K NG +F + DI Q+R S
Sbjct: 101 MIEEYSF-SFSYSDSDSQDVMMNINRTGNKKNGGIFNSTADITPNQMRSSA--------C 151
Query: 293 EIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDI 325
++ L+++ +D++ E+ + ++LL+ Y+D+
Sbjct: 152 KMVRTLVQLMRTLDKMPDERTIVMKLLY-YDDV 183
>At5g66005.2 68418.m08311 Expressed protein
Length = 164
Score = 31.9 bits (69), Expect = 0.67
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLK 37
LV GPPG GKTT +++ DM++
Sbjct: 9 LVTGPPGVGKTTLIMRVLDMMR 30
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 31.9 bits (69), Expect = 0.67
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVM 73
G L+ GPPG GK+T M+++L+ + + + + + + +IV+E++
Sbjct: 245 GYLLFGPPGTGKSTMIAAMANLLEYDVYDLELTTVKDNTELRRLLIETSGKSIIVIEDID 304
Query: 74 EQIDL 78
+DL
Sbjct: 305 CSLDL 309
>At5g61740.1 68418.m07747 ABC transporter family protein ABC family
transporter, Entamoeba histolytica, TREMBL:EH058
Length = 848
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
+LGP GAGKT++ M+ +LK ++ LD D
Sbjct: 562 MLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICKD 598
>At5g61700.1 68418.m07741 ABC transporter family protein ABC family
transporter, Entamoeba histolytica, EMBL:EH058
Length = 888
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
+LGP GAGKT++ M+ +LK ++ LD D
Sbjct: 602 MLGPNGAGKTSFISMMTGLLKPSSGTALVQGLDICKD 638
>At5g60040.1 68418.m07529 DNA-directed RNA polymerase, putative
similar to SP|P04051 DNA-directed RNA polymerase III
largest subunit (EC 2.7.7.6) {Saccharomyces cerevisiae};
contains InterPro accession IPR000722: RNA polymerase,
alpha subunit
Length = 1328
Score = 31.5 bits (68), Expect = 0.89
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 17 VLGPPGA-GKTTYCIKMSDMLKTLGRQVIIVNL-DPANDTM-NYKPDIDIRELIVLEEVM 73
V+G PG G+TT + ++ KTLG + + D M N+ IDIR +++L +VM
Sbjct: 1182 VMGTPGINGRTTTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVM 1241
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVM 73
G L+ GPPG GK+T M+++L + + + ++ + +IV+E++
Sbjct: 238 GYLLYGPPGTGKSTMIAAMANLLNYSIYDLELTAIQNNSELRKILTATSNKSIIVIEDID 297
Query: 74 EQIDL 78
+DL
Sbjct: 298 CSLDL 302
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVM 73
G L+ GPPG GK+T +++ L + + + ++ D + +IV+E++
Sbjct: 245 GYLLFGPPGTGKSTMIAAIANFLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVIEDID 304
Query: 74 EQIDL 78
+DL
Sbjct: 305 CSLDL 309
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVM 73
G L+ GPPG GK++ M++ LK + + ++ +D R ++V+E++
Sbjct: 255 GYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVMRDSDLRRLLLATRNRSILVIEDID 314
Query: 74 EQIDLGPN 81
+DL PN
Sbjct: 315 CAVDL-PN 321
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVM 73
G L+ GPPG GK++ M++ LK + + ++ +D R ++V+E++
Sbjct: 255 GYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVMRDSDLRRLLLATRNRSILVIEDID 314
Query: 74 EQIDLGPN 81
+DL PN
Sbjct: 315 CAVDL-PN 321
>At5g13790.1 68418.m01608 floral homeotic protein AGL-15 (AGL15)
Length = 268
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 254 ASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRL--LQE 311
A V +V +G +F+ +K L + HQ S +++ E+++ D+L LQE
Sbjct: 41 AEVAVIVFSKSGKLFEYSSTGMKQTLSRYGNHQSSSASKA-EEDCAEVDILKDQLSKLQE 99
Query: 312 KHLQVQ 317
KHLQ+Q
Sbjct: 100 KHLQLQ 105
>At5g03940.1 68418.m00374 signal recognition particle 54 kDa
protein, chloroplast / 54 chloroplast protein / SRP54
(FFC) identical to Swiss-Prot:P37107 signal recognition
particle 54 kDa protein, chloroplast precursor (SRP54)
(54 chloroplast protein) (54CP) (FFC) [Arabidopsis
thaliana]
Length = 564
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEE 71
L+ G G GKTT C K++ LK G+ +++ A D Y+P I +L++L E
Sbjct: 180 LLAGLQGVGKTTVCAKLACYLKKQGKSCMLI----AGDV--YRP-AAIDQLVILGE 228
>At3g47750.1 68416.m05202 ABC transporter family protein probable
transport protein ABC-C, Homo sapiens, PIR2:S71363
Length = 944
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
+LGP GAGKT++ M+ ++K ++ +LD D
Sbjct: 658 MLGPNGAGKTSFINMMTGLVKPTSGTALVESLDICQD 694
>At4g09960.1 68417.m01629 MADS-box protein (AGL11)
Length = 230
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 245 VNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSEKHQMSKSNREIY--NKLIEIE 302
++ ++ K L V+N ++KA + + ++L ++ ++K ++ N IY K+ E+E
Sbjct: 116 LSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVE 175
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLK 37
G L+ GPPG GK+T M++++K
Sbjct: 238 GYLLYGPPGTGKSTMIAAMANLMK 261
>At1g54350.1 68414.m06196 ABC transporter family protein similar to
hypothetical ABC transporter ATP-binding protein
GI:9955395 from [Microcystis aeruginosa]
Length = 706
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPD 60
L++GP G+GKT+ M+ + ++ G+ I LDP D K D
Sbjct: 461 LIMGPSGSGKTSLLRAMAGLWRS-GKGKITFYLDPEVDFTQEKSD 504
>At1g10760.1 68414.m01231 starch excess protein (SEX1) identical to
SEX1 [Arabidopsis thaliana] GI:12044358; supporting cDNA
gi|12044357|gb|AF312027.1|AF312027
Length = 1399
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 269 KTEEDILKGQLRKSEKHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKDA 328
+T E ++G K ++ R I N + + +D +EKH+Q Y D K
Sbjct: 440 QTFELEIEGDSYKGMPFVLNAGERWIKNN--DSDFYVDFAKEEKHVQ----KDYGDGKGT 493
Query: 329 AQIVINHVANMEGTTVKEIHDRLNLA 354
A+ +++ +A++E K R N+A
Sbjct: 494 AKHLLDKIADLESEAQKSFMHRFNIA 519
>At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain, weak hit to PF01661: Appr-1-p
processing enzyme family
Length = 912
Score = 29.5 bits (63), Expect = 3.6
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 16 LVLGPPGAGKTTYC 29
L++GPPG+GK+T+C
Sbjct: 231 LLIGPPGSGKSTFC 244
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 16 LVLGPPGAGKTTYCIKMSDML 36
L+LGPPG GKTT + +S L
Sbjct: 166 LLLGPPGCGKTTLLLALSGRL 186
>At3g47770.1 68416.m05204 ABC transporter family protein AbcA,
Dictyostelium discoideum, U66526
Length = 900
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
+LGP GAGKT++ M+ ++K + LD D
Sbjct: 620 MLGPNGAGKTSFINMMTGLVKPSSGSAFVQGLDICKD 656
>At3g47760.1 68416.m05203 ABC transporter family protein probable
transport protein ABC-C, Homo sapiens, PIR2:S71363
Length = 872
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
+LGP GAGKT++ M+ ++K + LD D
Sbjct: 586 MLGPNGAGKTSFINMMTGLMKPTSGAAFVHGLDICKD 622
>At3g47740.1 68416.m05201 ABC transporter family protein ATP binding
cassette transporter ABC1, Homo sapiens, PIR2:A54774
Length = 947
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
+LGP GAGKT++ M+ ++K + LD D
Sbjct: 661 MLGPNGAGKTSFINMMTGLVKPTSGAAFVQGLDICKD 697
>At3g10420.2 68416.m01250 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 684
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
LV+G PG GKTT +++ ML R+ +++ +D +N+
Sbjct: 217 LVIGSPGVGKTTLIREIARMLADEHRKRVVI-VDTSNE 253
>At3g10420.1 68416.m01249 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 547
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 16 LVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
LV+G PG GKTT +++ ML R+ +++ +D +N+
Sbjct: 217 LVIGSPGVGKTTLIREIARMLADEHRKRVVI-VDTSNE 253
>At1g79050.1 68414.m09217 DNA repair protein recA identical to DNA
repair protein recA, chloroplast [Precursor] SP:Q39199
from [Arabidopsis thaliana] ;contains Pfam profile:
PF00154 recA bacterial DNA recombination protein
Length = 439
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKP-DIDIRELIVLE 70
+ GP +GKTT + ++ LG ++V+ + A D K +D+ LIV +
Sbjct: 140 IYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 194
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 2 TNKRFKPTQTFYGQLVL--GPPGAGKTTYCIKMSDML 36
T K P + +++L GPPG GKT+ C ++ L
Sbjct: 190 TQKGVNPNLVSWNRIILLHGPPGTGKTSLCKALAQKL 226
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVN 47
G L+ GPPG GKT ++ ML G+ IVN
Sbjct: 252 GMLLFGPPGTGKTLMARQIGKMLN--GKDPKIVN 283
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEV 72
G L+ GPPG GK+T M++ L+ + + + + + +IV+E++
Sbjct: 242 GYLLFGPPGTGKSTMIAAMANFLEYDVYDLELTTVKDNTHLRRLLIETSAKSIIVIEDI 300
>At3g47790.1 68416.m05206 ABC transporter family protein contains
Pfam domain, PF00005: ABC transporter
Length = 901
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPAND 53
+LGP GAGKT++ M+ ++K + LD D
Sbjct: 622 MLGPNGAGKTSFINMMTGIIKPSSGTAFVQGLDILTD 658
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 16 LVLGPPGAGKTTYCIKMSDML-KTLGRQVIIVN 47
L++GPPG GKTT +++ ML ++V+IV+
Sbjct: 201 LLIGPPGVGKTTMIREVARMLGNDYEKRVMIVD 233
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDML 36
G L+ GPPG GK+T M+++L
Sbjct: 243 GYLLYGPPGTGKSTMISAMANLL 265
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 14 GQLVLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMNYKPDIDIRELIVLEEVM 73
G L+ GPPG GK+T M++ L + + + ++ + +IV+E++
Sbjct: 238 GYLLHGPPGTGKSTMIAAMANHLNYSIYDLELTAIRNNSELRKLLTATSSKSIIVIEDID 297
Query: 74 EQIDL 78
+DL
Sbjct: 298 CSLDL 302
>At2g37010.1 68415.m04539 ABC transporter family protein contains
ABC transporter domain, Pfam:PF00005
Length = 1063
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 17 VLGPPGAGKTTYCIKMSDMLKTLGRQVIIVNLDPANDTMN-YK 58
V+GP GAGKTT+ ++ R +I+ ++ ND++N YK
Sbjct: 497 VMGPSGAGKTTFLSALAGKATGCTRTGLIL-INGRNDSINSYK 538
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.3 bits (60), Expect = 8.3
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 224 KKLNSAFISIIEDYSLVTFQLVNMMNEKSLASVKNLVDKANGYVFKTEEDILKGQLRKSE 283
K+ +A++ IE+ S V L+N NE +G V + E+ K L + +
Sbjct: 913 KERETAYLKKIEELSKVQEDLLNKENE------------LHGMVVEIEDLRSKDSLAQKK 960
Query: 284 KHQMSKSNREIYNKLIEIEMRIDRLLQEKHLQVQLLHQYNDIKDAAQIVINHVANMEGTT 343
++S N + K E++ + + K QV L +++ D Q +I+ ++
Sbjct: 961 IEELSNFNASLLIKENELQAVVCENEELKSKQVSTLKTIDELSDLKQSLIHKEKELQAAI 1020
Query: 344 VK 345
V+
Sbjct: 1021 VE 1022
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.137 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,511,781
Number of Sequences: 28952
Number of extensions: 289586
Number of successful extensions: 1157
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1122
Number of HSP's gapped (non-prelim): 46
length of query: 356
length of database: 12,070,560
effective HSP length: 82
effective length of query: 274
effective length of database: 9,696,496
effective search space: 2656839904
effective search space used: 2656839904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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