GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000393-TA|BGIBMGA000393-PA|IPR002035|von Willebrand
factor, type A
         (366 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1CE69 Cluster: Mannosyl-oligosaccharide alpha-1,2-mann...    36   1.3  
UniRef50_Q4FKP4 Cluster: Putative uncharacterized protein; n=1; ...    36   2.2  
UniRef50_Q8EEE3 Cluster: SrpA-related protein; n=1; Shewanella o...    35   2.9  
UniRef50_A4AD56 Cluster: Putative uncharacterized protein; n=1; ...    35   3.8  
UniRef50_A2TWF7 Cluster: Metallo-beta-lactamase; n=1; Dokdonia d...    35   3.8  
UniRef50_Q4U9M0 Cluster: Cyclin-dependent serimne/threonine kina...    35   3.8  
UniRef50_A2EPW9 Cluster: Putative uncharacterized protein; n=1; ...    35   3.8  
UniRef50_Q8A8Z7 Cluster: Putative uncharacterized protein; n=5; ...    34   5.1  
UniRef50_A5KL69 Cluster: Putative uncharacterized protein; n=3; ...    34   5.1  
UniRef50_P37297 Cluster: Phosphatidylinositol 4-kinase STT4; n=3...    34   5.1  
UniRef50_A2FEZ5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_A1CE69 Cluster: Mannosyl-oligosaccharide
           alpha-1,2-mannosidase; n=9; Eurotiomycetidae|Rep:
           Mannosyl-oligosaccharide alpha-1,2-mannosidase -
           Aspergillus clavatus
          Length = 722

 Score = 36.3 bits (80), Expect = 1.3
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 23  ENLPPDIKTLTTQKTVINKRSAGIGEWAFRRTVAILIKGSRTQRKDEGDIEISTHMKFNN 82
           +++ PD  T TT  T  N++S G G+    ++  +     +T R  E DIEI T  + N 
Sbjct: 515 QDVYPDATTTTTTTTGSNRKSHGAGDDLPLKSAPLYPLSDKTLRWRE-DIEIHTQDRHNL 573

Query: 83  ERWETLNSYLESDEPFSEETFR 104
           +R ET+ S         +E +R
Sbjct: 574 QRPETVESLFYMYRVTGDEMYR 595


>UniRef50_Q4FKP4 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 663

 Score = 35.5 bits (78), Expect = 2.2
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 11/126 (8%)

Query: 26  PPDIKTLTTQKTVINKRSAGIGEWAFRRTVAILIKGSRTQRKDEGDIEISTHMKFNNERW 85
           PP++K +T  K V  + +AG      RR   + IK    +++   ++E+S H     + W
Sbjct: 290 PPEVKVVT-DKPVEVRPTAG----TIRREALLYIKREEERKRALKEVEVSLHDAREYDDW 344

Query: 86  ETLNSYLESDEPFSEETFRR---VLGYIEGAIYKPTIVEETIMAWNEYVHTFLIEYKE-- 140
                  E  E  +EE  RR   +    E A  K   +EE   A  +   +  +  +E  
Sbjct: 345 RERERKKEEQEQ-AEEVVRRKEKIKQIAESATEKRKAIEEAKKAMTQKCRSEKLSLEEAY 403

Query: 141 AEQKEF 146
           A QKEF
Sbjct: 404 AAQKEF 409


>UniRef50_Q8EEE3 Cluster: SrpA-related protein; n=1; Shewanella
           oneidensis|Rep: SrpA-related protein - Shewanella
           oneidensis
          Length = 716

 Score = 35.1 bits (77), Expect = 2.9
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 281 LDTTETIQPTTIDRLLDVCARALDTAASNNRQRPALQMNAVQSTSQIRRSASTGRLPSLN 340
           +DTT+TI+P T    +D+   A D +A ++    AL      STS  +    TGR     
Sbjct: 581 VDTTDTIEPPTATLAIDLPQAAEDNSAQSSTNTLAL---LAASTSYNQDLLQTGRSAMRF 637

Query: 341 ISKESCSNFSNNDRKN 356
               + +N +NND  N
Sbjct: 638 YGSVALANLTNNDGVN 653


>UniRef50_A4AD56 Cluster: Putative uncharacterized protein; n=1;
           Congregibacter litoralis KT71|Rep: Putative
           uncharacterized protein - Congregibacter litoralis KT71
          Length = 443

 Score = 34.7 bits (76), Expect = 3.8
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 135 LIEYKEAEQKEFETFLSAIQKCKWQFWSECEAPKPDLLTFYKHMDPLKIAVRMFSVLISE 194
           L+  K   Q+    + + I++  W  W++  A +PD     KH+  LK A   F V   E
Sbjct: 93  LLHLKSKRQEMMTQWDTFIRQTSW--WTQLTAERPDFSELDKHIQILKSASAQFEVEYGE 150

Query: 195 PMIITCDTVNTI 206
            + + C  ++ I
Sbjct: 151 SVKVICKDLDVI 162


>UniRef50_A2TWF7 Cluster: Metallo-beta-lactamase; n=1; Dokdonia
          donghaensis MED134|Rep: Metallo-beta-lactamase -
          Dokdonia donghaensis MED134
          Length = 133

 Score = 34.7 bits (76), Expect = 3.8
 Identities = 21/82 (25%), Positives = 35/82 (42%)

Query: 16 NNVVSIEENLPPDIKTLTTQKTVINKRSAGIGEWAFRRTVAILIKGSRTQRKDEGDIEIS 75
          N   S + +    +  +  QK VIN+ S    E A       L+     +  + G I+ +
Sbjct: 8  NQATSQQASPEASVSEVQEQKIVINRISPDELETAMSAQEIQLVDVRTDREWESGHIKGA 67

Query: 76 THMKFNNERWETLNSYLESDEP 97
           H + NN  W++    L+ DEP
Sbjct: 68 KHFEMNNVNWQSQLETLDKDEP 89


>UniRef50_Q4U9M0 Cluster: Cyclin-dependent serimne/threonine kinase
           (Cdk)-related protein, putative; n=3; Theileria|Rep:
           Cyclin-dependent serimne/threonine kinase (Cdk)-related
           protein, putative - Theileria annulata
          Length = 843

 Score = 34.7 bits (76), Expect = 3.8
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 115 YKPTIVEETIMAWNEYVHTFLIEYKEAEQKEFETFLSAIQKCKWQFWSECEAPKPDLLTF 174
           Y   I++  +    EYV   L+EY E + +EFE     I  CK    +E      DLL  
Sbjct: 168 YGSQIIDNNLFIVTEYVEYNLVEYMERKHREFE----YINSCKTLLKNEVMKIMMDLLKA 223

Query: 175 YKHMDPLKIAVRMFSVLISEPMIITCDTV 203
              +  +K+  R    L  E + I CD +
Sbjct: 224 VSFIHSMKVFHRN---LKPENIFIDCDVI 249


>UniRef50_A2EPW9 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 243

 Score = 34.7 bits (76), Expect = 3.8
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 304 DTAASNNRQRPALQMNAVQSTSQIRRSASTGRLPSLNI---SKESCSNFSNNDRKNKFSI 360
           DT   N+++R A + +A  S S + RS S    P +N    +KE+CS+  N+  +N    
Sbjct: 10  DTNERNHKRRRATKSDAKGSFSLVERSKSLVLFPDINSFDKNKENCSHIINSTPENSIIT 69

Query: 361 NAS 363
           N S
Sbjct: 70  NQS 72


>UniRef50_Q8A8Z7 Cluster: Putative uncharacterized protein; n=5;
           Bacteroidetes|Rep: Putative uncharacterized protein -
           Bacteroides thetaiotaomicron
          Length = 1109

 Score = 34.3 bits (75), Expect = 5.1
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 82  NERWETLNSYLESDEPFSEETFRRVLGYIEGAIYKPTIVEETIMAWNEYVHT--FLIEY- 138
           N+ W T + + E+    S    R  +GYI      P   ++  +AW E +    F   Y 
Sbjct: 863 NDLWNTRHQFFETMRTDSSANVREAIGYIPWYFNLPDTTKKYEVAWKEIMDEKGFSAPYG 922

Query: 139 -KEAEQKEFETFLSAIQKCKW 158
              AE++  E     + KC+W
Sbjct: 923 LTTAERRHPEFRTRGVGKCEW 943


>UniRef50_A5KL69 Cluster: Putative uncharacterized protein; n=3;
           Clostridiales|Rep: Putative uncharacterized protein -
           Ruminococcus torques ATCC 27756
          Length = 216

 Score = 34.3 bits (75), Expect = 5.1
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 14/114 (12%)

Query: 45  GIGEWAFRRTVAILIKGSRTQRKDEGDIEISTHMKFNNERWETLNSYL-ESDEPFSEETF 103
           GI E AFR T   L +   T+ ++ G +EI+  +  N++  E  N++L E D+ + E+  
Sbjct: 19  GIYEPAFRETYQWLTEQKVTEEREIGSVEIAGWLGLNSK--EMWNTFLPELDQSYKEQAS 76

Query: 104 RRVLGYIEGAIYKPTIV-----EETIMAW-NEYVHTFLI-----EYKEAEQKEF 146
           R V   +   I K   V     EE + A  N   H  ++      Y+EA  KEF
Sbjct: 77  RMVGDLMVRQIRKHKAVWYPGAEEMLTALKNRGYHLVILSNCKASYREAHWKEF 130


>UniRef50_P37297 Cluster: Phosphatidylinositol 4-kinase STT4; n=3;
           Saccharomycetales|Rep: Phosphatidylinositol 4-kinase
           STT4 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 1900

 Score = 34.3 bits (75), Expect = 5.1
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 14/102 (13%)

Query: 130 YVHTF-LIEYKEAEQKE-FETFLSAIQKCKWQFW-SECEAPK--------PDLLTFYKHM 178
           Y+ T  LI + E  + E FE+F + + +   +F+ S+   P           LL F+   
Sbjct: 340 YLQTLCLIPFIEDTESELFESFTNVVSESIDKFFLSDVVTPSLIKAIVASASLLNFFTEK 399

Query: 179 DPLKIAVRMFSVLISEPMIITCDTVNTILLGITDGLYFPLNK 220
             L + +RMF +L++ P I T +TVN +    T GLY PLN+
Sbjct: 400 LSLTL-IRMFPLLVASPHITT-ETVNDVAKIFTTGLY-PLNE 438


>UniRef50_A2FEZ5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 690

 Score = 33.5 bits (73), Expect = 8.9
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 131 VHTFLIEYKEAEQKEFETFLSAIQKCKWQFWSECEAPKPDLLTFYKHMDPLKIAVRMFSV 190
           +  FL E+ E+E     +F+ A+  C   FWS+ E      + F+K  DP    +   S+
Sbjct: 111 ISKFLTEHPESENYIVFSFIPALFSC---FWSDYEI--ESYIEFFKTFDPKFYPILTKSI 165

Query: 191 LISEPMIITCDTV 203
           L+ +   +  D+V
Sbjct: 166 LVHQSFYVFLDSV 178


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.317    0.132    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,908,754
Number of Sequences: 1657284
Number of extensions: 12815433
Number of successful extensions: 35496
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 35494
Number of HSP's gapped (non-prelim): 11
length of query: 366
length of database: 575,637,011
effective HSP length: 102
effective length of query: 264
effective length of database: 406,594,043
effective search space: 107340827352
effective search space used: 107340827352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 73 (33.5 bits)