GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000393-TA|BGIBMGA000393-PA|IPR002035|von Willebrand
factor, type A
         (366 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.4  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   5.8  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   5.8  
DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted ...    24   7.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 306 AASNNRQRPALQMNAVQSTSQIR---RSASTGRLPSLNISKESCSNFSNNDRKNKFSINA 362
           AA+  +Q+P     A  S++ ++    S ++  + S+N S  S +   N D K++  + A
Sbjct: 933 AAAPTQQQPLPPAPAAASSAGVQPTEHSVNSTNVTSINSSSSSSTADRNGDTKSRSPVVA 992

Query: 363 SG 364
            G
Sbjct: 993 DG 994


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 145 EFETFLSAIQKCKWQFWSECEAPK 168
           E   F   + KC W F+ +C++ K
Sbjct: 421 ESTLFDQTVLKCNWWFYVDCKSSK 444


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 145 EFETFLSAIQKCKWQFWSECEAPK 168
           E   F   + KC W F+ +C++ K
Sbjct: 429 ESTLFDQTVLKCNWWFYVDCKSSK 452


>DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted
          polypeptide protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 24 NLPPDIKTLTTQKTVINKRSAGIGEW 49
          ++P D+ TLTT     N+ S   G W
Sbjct: 29 HIPVDVSTLTTTLHPCNRLSNSYGLW 54


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.132    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,297
Number of Sequences: 2123
Number of extensions: 12199
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 4
length of query: 366
length of database: 516,269
effective HSP length: 65
effective length of query: 301
effective length of database: 378,274
effective search space: 113860474
effective search space used: 113860474
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)