GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000393-TA|BGIBMGA000393-PA|IPR002035|von Willebrand
factor, type A
         (366 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021728-10|CAA16817.1|  315|Drosophila melanogaster EG:95B7.1 p...    31   2.5  
AE014298-462|AAF45823.2|  333|Drosophila melanogaster CG2715-PA ...    31   2.5  
AY070922-1|AAL48544.1|  333|Drosophila melanogaster RE02884p pro...    30   4.4  
AY058301-1|AAL13530.1|  354|Drosophila melanogaster GH06351p pro...    30   5.8  
AE013599-3665|AAF47045.1|  354|Drosophila melanogaster CG12273-P...    30   5.8  

>AL021728-10|CAA16817.1|  315|Drosophila melanogaster EG:95B7.1
           protein.
          Length = 315

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 16/61 (26%), Positives = 32/61 (52%)

Query: 293 DRLLDVCARALDTAASNNRQRPALQMNAVQSTSQIRRSASTGRLPSLNISKESCSNFSNN 352
           DRL ++  R+L T +SN+    +L +N    T++     + G   S ++  ++  + SNN
Sbjct: 4   DRLPELLQRSLSTNSSNSSSNGSLLLNVYSGTTEFIIGNTGGNNNSYSVVSQNSHSCSNN 63

Query: 353 D 353
           +
Sbjct: 64  N 64


>AE014298-462|AAF45823.2|  333|Drosophila melanogaster CG2715-PA
           protein.
          Length = 333

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 16/61 (26%), Positives = 32/61 (52%)

Query: 293 DRLLDVCARALDTAASNNRQRPALQMNAVQSTSQIRRSASTGRLPSLNISKESCSNFSNN 352
           DRL ++  R+L T +SN+    +L +N    T++     + G   S ++  ++  + SNN
Sbjct: 4   DRLPELLQRSLSTNSSNSSSNGSLLLNVYSGTTEFIIGNTGGNNNSYSVVSQNSHSCSNN 63

Query: 353 D 353
           +
Sbjct: 64  N 64


>AY070922-1|AAL48544.1|  333|Drosophila melanogaster RE02884p
           protein.
          Length = 333

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 16/61 (26%), Positives = 32/61 (52%)

Query: 293 DRLLDVCARALDTAASNNRQRPALQMNAVQSTSQIRRSASTGRLPSLNISKESCSNFSNN 352
           DRL ++  R+L T +SN+    +L +N    T++     + G   S ++  ++  + SNN
Sbjct: 4   DRLPELLQRSLSTNSSNSSSDGSLLLNVYSGTTEFIIGNTGGNNNSYSVVSQNSHSCSNN 63

Query: 353 D 353
           +
Sbjct: 64  N 64


>AY058301-1|AAL13530.1|  354|Drosophila melanogaster GH06351p
           protein.
          Length = 354

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 52  RRTVAILIKGSRTQRKDEGDIEISTHMKFNNERWETLNSYLESDEPFSEETFRRV 106
           RR+V+   KG+  +RK +     S+H +  N RW +L +  E  +P    +F+ V
Sbjct: 19  RRSVSSQAKGASGKRKQKAKEMESSHDR--NRRWTSLGNQAEGRDPHKCSSFKVV 71


>AE013599-3665|AAF47045.1|  354|Drosophila melanogaster CG12273-PA
           protein.
          Length = 354

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 52  RRTVAILIKGSRTQRKDEGDIEISTHMKFNNERWETLNSYLESDEPFSEETFRRV 106
           RR+V+   KG+  +RK +     S+H +  N RW +L +  E  +P    +F+ V
Sbjct: 19  RRSVSSQAKGASGKRKQKAKEMESSHDR--NRRWTSLGNQAEGRDPHKCSSFKVV 71


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.132    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,452,477
Number of Sequences: 52641
Number of extensions: 573501
Number of successful extensions: 1693
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1690
Number of HSP's gapped (non-prelim): 5
length of query: 366
length of database: 24,830,863
effective HSP length: 86
effective length of query: 280
effective length of database: 20,303,737
effective search space: 5685046360
effective search space used: 5685046360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)