GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000392-TA|BGIBMGA000392-PA|undefined
         (324 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.99 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 122 CGVFWNNRTDERSLPLAVRVHRTLELADDKFYV 154
           C +F   +TDER  P   R  + + +  DKF V
Sbjct: 500 CRIFLAPKTDERGNPWLFRDQKIMFIELDKFTV 532


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 79  NQPFYGVAHAREYRTPSCM 97
           + PF  +  +  +RTPSC+
Sbjct: 239 SSPFESLKKSLNFRTPSCL 257


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 214 LNVGFGMPYTLKAEISKSDGSTCGTVECDTEGSESPGDEEGTVT 257
           LN+G   PY  K E+          V+ D   S SP  E   +T
Sbjct: 209 LNLGLDFPYQGKFEVPTKSSPRSSPVQSDV--SLSPVHEPLLIT 250


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.135    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,183
Number of Sequences: 317
Number of extensions: 3494
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 324
length of database: 114,650
effective HSP length: 57
effective length of query: 267
effective length of database: 96,581
effective search space: 25787127
effective search space used: 25787127
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)