Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000391-TA|BGIBMGA000391-PA|IPR003437|Glycine cleavage
system P-protein
(975 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0461 + 29553709-29554905,29555051-29555296,29555387-295554... 1038 0.0
06_03_0741 - 24016204-24016298,24016408-24016525,24016805-240169... 1033 0.0
12_02_1267 - 27448871-27450445 35 0.36
12_02_1268 + 27458823-27460046 33 0.84
12_02_0122 + 13923510-13925081 33 0.84
05_05_0223 - 23406814-23407477,23407597-23407919 33 1.1
01_06_1127 - 34699119-34699360,34699446-34699689,34699773-346998... 32 1.9
12_01_0252 + 1868670-1869200,1870167-1871120 32 2.6
11_01_0252 + 1934505-1935032,1936001-1936957 31 3.4
10_03_0034 + 7257033-7257045,7257074-7257104,7257880-7258009,725... 31 3.4
02_01_0317 - 2128660-2128776,2129281-2129364,2129463-2129543,213... 31 3.4
07_01_0670 + 5030971-5032698 31 4.5
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 31 4.5
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 30 7.8
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049... 30 7.8
>01_06_0461 + 29553709-29554905,29555051-29555296,29555387-29555464,
29555557-29555657,29555745-29555940,29556022-29556147,
29556231-29556416,29556921-29557034,29557522-29557674,
29558287-29558475,29558568-29558645,29558728-29558853,
29558942-29559040,29559315-29559432,29559531-29559625
Length = 1033
Score = 1038 bits (2570), Expect = 0.0
Identities = 505/972 (51%), Positives = 665/972 (68%), Gaps = 18/972 (1%)
Query: 6 RHVTTQSTRSDTLFPDRVDFPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQ--- 62
++ T + + L P FP RH + M G+ +LD L + VP I+
Sbjct: 54 QYTTGRPVSASALQPSDT-FPRRHNSATPAEQAAMASECGFNTLDALIDATVPAAIRAPT 112
Query: 63 --FQGLMNISEPISEYDLIERVRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWT 120
F G + +E +I+ ++ +A N+ ++S+IGMGY+N VP I+RN+ ENP W
Sbjct: 113 MHFSGKFDAG--FTESQMIDHMQRLAAMNKAYKSFIGMGYYNTHVPAVILRNLMENPAWY 170
Query: 121 TQYTPYQPEVAQGRLESLLNYQTMVSDMTGLDVANASLLDEGTAAAEALSLCHR--HNKR 178
TQYTPYQ E+AQGRLESLLNYQTMV+D+TGL ++NASLLDE TAAAEA+++C+ +K+
Sbjct: 171 TQYTPYQAEIAQGRLESLLNYQTMVADLTGLPMSNASLLDEATAAAEAMAMCNGILKSKK 230
Query: 179 TKFVVSERLHPQTLAVVHTRMDALGLDVLVVPDVRHVDFAQRDISAVLLQCPDTRGLVYD 238
F+++ HPQT+ V TR L+V+V D + D++ D+ VL+Q P T G V D
Sbjct: 231 KTFLIASNCHPQTIDVCQTRAAGFDLNVIVA-DAKDFDYSSGDVCGVLVQYPGTEGEVLD 289
Query: 239 YSGLAAAAHEHGXXXXXXXXXXXXXXIRPPAECGAALAVGTSQRLGVPMGYGGPHAGFFA 298
Y+ AH HG +RPP E GA +AVG++QR GVPMGYGGPHA F A
Sbjct: 290 YAEFVKDAHAHGVKVVMATDLLALTSLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLA 349
Query: 299 AEHQLVRLMPGRMVGVTRDTTGRDAYRLALQTREQHIRRDKATSNICTAQALLANMSAMY 358
+ RLMPGR++GV+ D++G+ A R+A+QTREQHIRRDKATSNICTAQALLANM+AMY
Sbjct: 350 TSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMY 409
Query: 359 AVYHGPQGLREIATRVHNATLVLDHGIKMRGHKQSNDV-YFDTLYVVPSPDHDASAIKAR 417
AVYHGP+GL+ IA RVH HG+K G ++ +FDT+ V + DA+AI
Sbjct: 410 AVYHGPEGLKAIADRVHGLAGTFAHGLKKLGTVTVQELPFFDTVKVKVA---DANAIAQE 466
Query: 418 AEEKKVNLRYFDEGAVGVALDETTTMKDIEDLLWIFDC-KNVQEVAQTEDILSKSVLKGP 476
A + ++NLR D + VA DETTT++D++ L +F+ K V A++ S +
Sbjct: 467 ACKNEMNLRVVDATTITVAFDETTTLEDVDKLFKVFNGGKPVNFTAESLASEVSSSIPSS 526
Query: 477 FRRTSPYLTHPVFNMHHSETKLVRYMKRLENKDISLVHSMIPLGSCTMKLNSTTEMMPCS 536
R SPYLTHP+FNM+H+E +L+RY+ +L++KD+SL HSMIPLGSCTMKLN+T EMMP +
Sbjct: 527 LVRKSPYLTHPIFNMYHTEHELLRYLHKLQSKDLSLCHSMIPLGSCTMKLNATVEMMPVT 586
Query: 537 YKHFTDIHPFAPLEQCQGYHTLFEELANDLCAITGYDRVSFQPNSGAQGEYAGLRTIKRY 596
Y F ++HPFAP EQ GYH +F++L + LC ITG+D S QPN+GA GEYAGL I+ Y
Sbjct: 587 YPSFANMHPFAPTEQAAGYHEMFDDLGDLLCKITGFDSFSLQPNAGASGEYAGLMVIRAY 646
Query: 597 HEYRGDAGRNICLIPVSAHGTNPASAHMAGMRVCAIRVTPTGDIDMAHLKDMVEEHSEKV 656
H RGD R++C+IPVSAHGTNPASA M GM++ A+ G+I++ L+ E + + +
Sbjct: 647 HRARGDYHRDVCIIPVSAHGTNPASAAMCGMKIVAVGTDSKGNINIEELRKAAEANKDNL 706
Query: 657 SCLMLTYPSTFGVFEEKAADICALVHAHGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNL 716
+ LM+TYPST GV+EE +IC ++H +GGQVY+DGANMNAQVGL PG G+DV HLNL
Sbjct: 707 AALMVTYPSTHGVYEEGIDEICRIIHENGGQVYMDGANMNAQVGLTSPGFIGADVCHLNL 766
Query: 717 HKTFCIXXXXXXXXXXXXXVKAHLAPFLPSHPVVDPLA-DLGDAAHSFGSVSAAPFGSSA 775
HKTFCI VK HLAPFLPSHPV+ L + G++SAAP+GS+
Sbjct: 767 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVITTGGFPLPEKTDPLGTISAAPWGSAL 826
Query: 776 ILPISWAYIKMMGPKGLRRATQVAILNANYMSRRLEDHYKTLYKGERGLVAHEFIIDVRD 835
ILPIS+ YI MMG KGL A+++AILNANYM++RLE HY L++G G VAHEFIID+R
Sbjct: 827 ILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRG 886
Query: 836 LKKTANIEPGDIAKRLMDFGFHAPTMSWPVAGTLMIEPTESEDLQELDRFCDALITIRKE 895
K TA IEP D+AKRLMD+GFHAPTMSWPV GTLMIEPTESE ELDRFCDALI+IR+E
Sbjct: 887 FKTTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 946
Query: 896 IKDIEDGLIDKRLNPLKLAPHTQEEVISEEWNRPYTREQAAFPAPFVKGETKIWPTVGRI 955
I +IE G D N LK APH + ++S+ W +PY+RE AAFPA +++G K WPT R+
Sbjct: 947 IAEIESGKADVNNNVLKSAPHPPQLLMSDSWTKPYSREYAAFPAAWLRG-AKFWPTTCRV 1005
Query: 956 DDMYGDKHLVCT 967
D++YGD++L+CT
Sbjct: 1006 DNVYGDRNLICT 1017
>06_03_0741 - 24016204-24016298,24016408-24016525,24016805-24016903,
24016992-24017117,24017200-24017277,24017366-24017554,
24018186-24018338,24018785-24018898,24019576-24019761,
24019845-24019970,24020053-24020248,24020338-24020438,
24020533-24020610,24020707-24020952,24021063-24022253
Length = 1031
Score = 1033 bits (2557), Expect = 0.0
Identities = 499/951 (52%), Positives = 655/951 (68%), Gaps = 13/951 (1%)
Query: 25 FPSRHIGPRDQDIVTMLDLLGYKSLDQLTNDAVPKKIQFQGLM---NISEPISEYDLIER 81
FP RH + M G+ ++D L + VP I+ + +E ++IE
Sbjct: 70 FPRRHNSATPAEQAAMASECGFGTVDALIDATVPAAIRAPEMRFSGRFDAGFTESEMIEH 129
Query: 82 VRLIAEKNEIWRSYIGMGYHNCCVPHAIMRNMFENPGWTTQYTPYQPEVAQGRLESLLNY 141
++ +A N ++S+IGMGY+N VP I+RN+ ENP W TQYTPYQ E+AQGRLESLLNY
Sbjct: 130 MQRLAAMNRAYKSFIGMGYYNTHVPAVILRNLMENPAWYTQYTPYQAEIAQGRLESLLNY 189
Query: 142 QTMVSDMTGLDVANASLLDEGTAAAEALSLCHR--HNKRTKFVVSERLHPQTLAVVHTRM 199
QTMV+D+TGL ++NASLLDE TAAAEA+++C+ +K+ F+++ HPQT+ V TR
Sbjct: 190 QTMVADLTGLPMSNASLLDEATAAAEAMAMCNGILKSKKKTFLIASNCHPQTIDVCQTRA 249
Query: 200 DALGLDVLVVPDVRHVDFAQRDISAVLLQCPDTRGLVYDYSGLAAAAHEHGXXXXXXXXX 259
L+V VV D + D+ D+ VL+Q P T G V DY+ AH HG
Sbjct: 250 AGFDLNV-VVADAKDFDYGSGDVCGVLVQYPGTEGEVLDYAEFVRDAHAHGVKVVMATDL 308
Query: 260 XXXXXIRPPAECGAALAVGTSQRLGVPMGYGGPHAGFFAAEHQLVRLMPGRMVGVTRDTT 319
+RPP E GA +AVG++QR GVPMGYGGPHA F A + RLMPGR++GV+ D++
Sbjct: 309 LALTSLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSS 368
Query: 320 GRDAYRLALQTREQHIRRDKATSNICTAQALLANMSAMYAVYHGPQGLREIATRVHNATL 379
G+ A R+A+QTREQHIRRDKATSNICTAQALLANM+AMYAVYHGP+GL+ IA RVH
Sbjct: 369 GKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIADRVHGLAG 428
Query: 380 VLDHGIKMRGHKQSNDV-YFDTLYVVPSPDHDASAIKARAEEKKVNLRYFDEGAVGVALD 438
G+K G ++ +FDT+ V + DA+AI A + ++NLR D + VA D
Sbjct: 429 TFAQGLKKLGTVTVQELPFFDTVKVKVA---DANAIAQEACKNEMNLRVVDATTITVAFD 485
Query: 439 ETTTMKDIEDLLWIFDC-KNVQEVAQTEDILSKSVLKGPFRRTSPYLTHPVFNMHHSETK 497
ETTT++D++ L +F+ K V A++ S + R SPYLTHP+FNM+H+E +
Sbjct: 486 ETTTLEDVDKLFKVFNGGKPVNFTAESLAPEVSSSIPSSLVRKSPYLTHPIFNMYHTEHE 545
Query: 498 LVRYMKRLENKDISLVHSMIPLGSCTMKLNSTTEMMPCSYKHFTDIHPFAPLEQCQGYHT 557
L+RY+ +L++KD+SL HSMIPLGSCTMKLN+T EMMP +Y +F ++HPFAP +Q GYH
Sbjct: 546 LLRYLYKLQSKDLSLCHSMIPLGSCTMKLNATVEMMPVTYPNFANMHPFAPTDQAAGYHE 605
Query: 558 LFEELANDLCAITGYDRVSFQPNSGAQGEYAGLRTIKRYHEYRGDAGRNICLIPVSAHGT 617
+F++L + LC ITG+D S QPN+GA GEYAGL I+ YH RGD R++C+IPVSAHGT
Sbjct: 606 MFDDLGDLLCKITGFDSFSLQPNAGASGEYAGLMVIRAYHRARGDYHRDVCIIPVSAHGT 665
Query: 618 NPASAHMAGMRVCAIRVTPTGDIDMAHLKDMVEEHSEKVSCLMLTYPSTFGVFEEKAADI 677
NPASA M GM++ A+ G+I++ L+ E + + ++ LM+TYPST GV+EE +I
Sbjct: 666 NPASAAMCGMKIVAVGTDSKGNINIEELRKAAEANKDNLAALMVTYPSTHGVYEEGIDEI 725
Query: 678 CALVHAHGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIXXXXXXXXXXXXXVK 737
C ++H +GGQVY+DGANMNAQVGL PG G+DV HLNLHKTFCI VK
Sbjct: 726 CMIIHENGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK 785
Query: 738 AHLAPFLPSHPVVDPLA-DLGDAAHSFGSVSAAPFGSSAILPISWAYIKMMGPKGLRRAT 796
HLAPFLPSHPV+ L + G++SAAP+GS+ ILPIS+ YI MMG KGL A+
Sbjct: 786 KHLAPFLPSHPVITTGGFPLPEKTDPLGTISAAPWGSALILPISYTYIAMMGSKGLTDAS 845
Query: 797 QVAILNANYMSRRLEDHYKTLYKGERGLVAHEFIIDVRDLKKTANIEPGDIAKRLMDFGF 856
++AILNANYM++RLE HY L++G G VAHEFIID+R K TA IEP D+AKRLMD+GF
Sbjct: 846 KIAILNANYMTKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKTTAGIEPEDVAKRLMDYGF 905
Query: 857 HAPTMSWPVAGTLMIEPTESEDLQELDRFCDALITIRKEIKDIEDGLIDKRLNPLKLAPH 916
HAPTMSWPV GTLMIEPTESE ELDRFCDALI+IR+EI +IE G D N LK APH
Sbjct: 906 HAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIESGKADVNNNVLKSAPH 965
Query: 917 TQEEVISEEWNRPYTREQAAFPAPFVKGETKIWPTVGRIDDMYGDKHLVCT 967
+ ++S+ W +PY+RE AAFPA +++G K WPT R+D++YGD++L+CT
Sbjct: 966 PPQLLMSDSWTKPYSREYAAFPAAWLRG-AKFWPTTCRVDNVYGDRNLICT 1015
>12_02_1267 - 27448871-27450445
Length = 524
Score = 34.7 bits (76), Expect = 0.36
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 772 GSSAILPISWAYIKMMGPKGLRRATQVAILNANYMSRRLEDHYKTLYKGERGLVAHEFII 831
G I+ + + + + P +RR + +Y R E +K L K G+ HE +
Sbjct: 363 GGERIIIFTTNHKEKLDPALIRRGRMDVHIEMSYC--RFEA-FKVLAKNYLGVEQHEMFV 419
Query: 832 DVRDLKKTANIEPGDIAKRLM 852
++R L + ++ P D+A+ LM
Sbjct: 420 EIRRLLEEIDMSPADVAENLM 440
>12_02_1268 + 27458823-27460046
Length = 407
Score = 33.5 bits (73), Expect = 0.84
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 812 DHYKTLYKGERGLVAHEFIIDVRDLKKTANIEPGDIAKRLM 852
+ +K L K G+ HE ++R L + A++ P D+A+ LM
Sbjct: 294 ESFKVLAKNYLGVEQHEMFGEIRQLLEEADMSPADVAENLM 334
>12_02_0122 + 13923510-13925081
Length = 523
Score = 33.5 bits (73), Expect = 0.84
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 772 GSSAILPISWAYIKMMGPKGLRRATQVAILNANYMSRRLEDHYKTLYKGERGLVAHEFII 831
G I+ + + + + P +RR + +Y + +K L G+ HE +
Sbjct: 368 GGERIIIFTTNHKEKLDPALIRRGRMDVHIEMSYCGF---EAFKVLASNYLGVEQHELLG 424
Query: 832 DVRDLKKTANIEPGDIAKRLM 852
D+R L + A++ P D+A+ LM
Sbjct: 425 DIRRLLEEADMSPADVAENLM 445
>05_05_0223 - 23406814-23407477,23407597-23407919
Length = 328
Score = 33.1 bits (72), Expect = 1.1
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 349 ALLANMSAMYAVYHGPQGLREIATRVHNATLVLDHGIKMRGHKQSNDVYFDTLYVVPSPD 408
ALL SA+ HGP GL E + L HG+ + G + +D + P
Sbjct: 35 ALLVGSSAL----HGPVGLAEQILLCFDRALAKLHGVNLAGAEDDDDAAGNGNGRKRKPG 90
Query: 409 HDASAIKARAEEKKVNLRYFDEGAVGVALDETTTMKDIEDLLW 451
A A +R + G G ++ TM D LW
Sbjct: 91 RGRGLTAASAAASSKRMRVSNAGGNGARIERKATMDD--KFLW 131
>01_06_1127 - 34699119-34699360,34699446-34699689,34699773-34699844,
34700123-34700218,34700322-34700438,34700520-34700676,
34700770-34700867,34700940-34701098,34701169-34701339,
34701402-34701479,34701548-34701667,34701968-34702085,
34702216-34702346,34702452-34702528,34702858-34702969,
34703057-34703239,34703416-34703517,34703617-34703718,
34703817-34703912,34704481-34704558,34704652-34704744,
34704817-34704938,34705035-34705116,34705204-34705278,
34705385-34705645,34705730-34705854,34705956-34706031,
34706128-34706277,34706359-34706454,34706707-34706814,
34706956-34707056,34707727-34707814,34707894-34708006,
34708278-34708383,34709143-34709247,34709356-34709427,
34709931-34709971,34710067-34710175,34710252-34710317,
34710404-34710540,34710788-34710890,34711416-34711535,
34711707-34711820,34711923-34712008,34712088-34712170,
34713283-34713347,34713444-34713621,34713697-34713776,
34714926-34715049,34715140-34715245,34715399-34715561
Length = 1966
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 626 GMRVCAIRVTPTGDIDMAHLKDMVEEHSEKVSCLMLTYPSTF 667
GM+V +T D + + L D+++E VSCL + P TF
Sbjct: 1453 GMKVICHELTQAVDPESSVLDDLIKEADRLVSCLAVMVPKTF 1494
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 31.9 bits (69), Expect = 2.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 458 VQEVAQTEDILSKSVLKGPFRRTSPYLTH------PVFNMHHSETKLVRYMKRLENKDIS 511
+ VA+ E+I +KS L SP+LTH P + + K+ R + L+ DI
Sbjct: 231 IDVVAKIEEIRAKSPLAAAAAPRSPFLTHHYLPMNPASSAADRDNKIRRMRRALDAADIE 290
Query: 512 LVHSMI 517
LV M+
Sbjct: 291 LVKLMV 296
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 458 VQEVAQTEDILSKSVLKGPFRRTSPYLTH------PVFNMHHSETKLVRYMKRLENKDIS 511
+ VA+ E+I +KS L SP+LTH P + + K+ R + L+ DI
Sbjct: 230 IDVVAKIEEIRAKSPLAAVAAPRSPFLTHHYLPMNPASSAADRDNKIRRMRRALDAADIE 289
Query: 512 LVHSMI 517
LV M+
Sbjct: 290 LVKLMV 295
>10_03_0034 +
7257033-7257045,7257074-7257104,7257880-7258009,
7258423-7258751,7259923-7260026,7260138-7260476,
7261074-7261199,7261366-7261489,7261615-7261723,
7262171-7262251
Length = 461
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 773 SSAILPISWAYIKMMGPKGLRRATQVAILNANYMSRRLEDHYKTL 817
+S IL + W + PKGL+ + I+N++Y+S ++ YK +
Sbjct: 36 TSVILGLLWWHSDPSTPKGLQDQVRSDIMNSSYLSLEDQEEYKMM 80
>02_01_0317 -
2128660-2128776,2129281-2129364,2129463-2129543,
2130230-2130407,2130530-2130673,2130780-2130826,
2131149-2131205,2131989-2132087,2132301-2132423,
2132514-2132636,2132859-2132972,2133612-2133800,
2134408-2134574,2134707-2134791,2134891-2135085,
2135162-2135251,2135418-2135603,2135885-2135959,
2136757-2136957
Length = 784
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 327 ALQTREQHIR-RDKATSNICTAQA-LLANMSAMYAVYHGPQGLREIATRVHNATLVLDHG 384
AL T QHI D+ T IC + NM A + + + RVH+ + + G
Sbjct: 371 ALDTVMQHIHYEDENTRYICIGPVNKVLNMLACWIEDPNSEAFKLHIPRVHDYLWIAEDG 430
Query: 385 IKMRGHKQSNDVYFDTLYVV 404
+KM+G+ S +DT + V
Sbjct: 431 MKMQGYNGSQ--LWDTAFTV 448
>07_01_0670 + 5030971-5032698
Length = 575
Score = 31.1 bits (67), Expect = 4.5
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 772 GSSAILPISWAYIKMMGPKGLRRATQVAILNANYMSRRLEDHYKTLYKGERGLVAHEFII 831
G I+ + ++ + P +RR + +Y + +KTL K + AH
Sbjct: 382 GGERIVVFTTNHLDKLDPALIRRGRMDMHIEMSYCGF---EAFKTLAKNYLDVDAHHLFD 438
Query: 832 DVRDLKKTANIEPGDIAKRLM 852
V +L + N+ P D+A+ LM
Sbjct: 439 AVEELLRDVNLTPADVAECLM 459
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 381 LDHGIKMRGHKQSNDVYFDTLYVVPSPDHDASAIKARAEEKKVNLRYFDEGAVGVALDET 440
L HG+++ ++SND+ DT V + D + EKK+ +GV D+
Sbjct: 417 LSHGLRI--FQESNDLGKDT---VEAKDETEMVVPDNEYEKKIRPTVIPANEIGVTFDDI 471
Query: 441 TTMKDIEDLL 450
+ DI++ L
Sbjct: 472 GALADIKECL 481
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 853 DFGFHAPTMSWPVAGTLMIEPTESEDLQELDRFCDALI 890
DF F S ++G ++++P+ D + DRFC L+
Sbjct: 285 DFNFSYSVYSGDLSGGVLVQPSTLRDYDDRDRFCIFLL 322
>03_04_0020 -
16504322-16504654,16504758-16504785,16504937-16504989,
16505377-16505463,16505636-16505704,16506071-16506145,
16507040-16507210,16507693-16507793,16508062-16508139,
16508492-16508648,16508737-16509006,16509369-16509485,
16510250-16510339,16510417-16510629,16510742-16510891,
16511929-16512342
Length = 801
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 853 DFGFHAPTMSWPVAGTLMIEPTESEDLQELDRFCDALI 890
DF F S ++G ++++P+ S+D + D FC L+
Sbjct: 283 DFTFAYSVYSGDLSGGMLVQPSTSDDYDDRDMFCIFLL 320
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,570,398
Number of Sequences: 37544
Number of extensions: 1211069
Number of successful extensions: 2433
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2405
Number of HSP's gapped (non-prelim): 16
length of query: 975
length of database: 14,793,348
effective HSP length: 89
effective length of query: 886
effective length of database: 11,451,932
effective search space: 10146411752
effective search space used: 10146411752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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