GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000391-TA|BGIBMGA000391-PA|IPR003437|Glycine cleavage
system P-protein
         (975 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    27   3.1  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    26   5.5  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   9.6  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   9.6  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 745 PSHPV-VDPLADLGDAAHSFGSVSAAPFGSSAILPISWAYIKMMGPKGLRRATQVAIL 801
           P HPV V+ +       + F   +  P G+       W  ++ +G  G++RA Q+AIL
Sbjct: 418 PVHPVQVNTIISFSGERYDFVITADQPVGAY------WIQLRGLGECGIKRAQQLAIL 469


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.8 bits (54), Expect = 5.5
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 10/133 (7%)

Query: 821 ERGLVAHEFIIDVRD---LKKTANIEPGDIAKRLMDFGFHAPTMSWPVAGTLMIEPTESE 877
           E GL A + I+D  D     + AN +P  +A  L D   H     +    + +I P+ + 
Sbjct: 324 EAGLEAIQKILDSLDDIIALQDANCDPDMLAGMLRDVKLHELLQLFDRISSSVINPSRAP 383

Query: 878 DLQELDRFCDALITI-----RKEIKDIEDGLIDKRLNP-LKLAPHTQEEVISEEWNRPYT 931
               + R  DA+  I      K +++ +  LI+   +P ++   HT + V  E +     
Sbjct: 384 PGDAISRCRDAIDVISSTAGHKYVRE-KSELINLLGSPHIQALLHTHDVVAREVYGEEAL 442

Query: 932 REQAAFPAPFVKG 944
           R      AP++ G
Sbjct: 443 RVTPPPIAPYLNG 455


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 745 PSHPV-VDPLADLGDAAHSFGSVSAAPFGSSAILPISWAYIKMMGPKGLRRATQVAIL 801
           P HP  V+ +       + F   +  P G+       W  ++ +G  G++RA Q+AIL
Sbjct: 418 PVHPAQVNTIISFSGERYDFVITADQPVGAY------WIQLRGLGECGIKRAQQLAIL 469


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.0 bits (52), Expect = 9.6
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 843 EPGDIAKRLMDFGFHA-PTMSWPVAGTLMIEPTESEDLQELDRFCDAL 889
           +P ++ +R++D  F   P + WP  G   + P  S  L ELD+   ++
Sbjct: 388 DPAEL-RRIVDALFPVHPPVEWPDLGVGNMAPLRSIGLTELDQIAASM 434


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.136    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,016,414
Number of Sequences: 2123
Number of extensions: 42302
Number of successful extensions: 66
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 66
Number of HSP's gapped (non-prelim): 4
length of query: 975
length of database: 516,269
effective HSP length: 71
effective length of query: 904
effective length of database: 365,536
effective search space: 330444544
effective search space used: 330444544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)