Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000390-TA|BGIBMGA000390-PA|IPR000728|AIR synthase
related protein, IPR010918|AIR synthase related protein, C-terminal,
IPR010073|Phosphoribosylformylglycinamidine synthase, eukaryotes and
proteobacteria
         (1340 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   4.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 691  NKVDRCVTGLVAQQQCVGPLH 711
            N   RCV G + +Q C G LH
Sbjct: 1116 NAYYRCVLGELRKQYCAGGLH 1136


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,442
Number of Sequences: 317
Number of extensions: 13335
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 3
length of query: 1340
length of database: 114,650
effective HSP length: 65
effective length of query: 1275
effective length of database: 94,045
effective search space: 119907375
effective search space used: 119907375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)