Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000390-TA|BGIBMGA000390-PA|IPR000728|AIR synthase
related protein, IPR010918|AIR synthase related protein, C-terminal,
IPR010073|Phosphoribosylformylglycinamidine synthase, eukaryotes and
proteobacteria
(1340 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0033 + 220125-220190,220274-224445,224863-224949,225048-22... 1160 0.0
01_06_1608 - 38612754-38616947,38617030-38617095 1157 0.0
02_05_0076 + 25637752-25639062,25639221-25639297,25640962-256410... 34 0.89
04_04_0773 - 27974909-27977191 33 2.1
01_06_1119 - 34640611-34640721,34640995-34641075,34641437-346414... 32 3.6
03_02_0853 + 11786022-11786105,11786509-11786592,11786915-11787925 31 4.7
07_01_0378 + 2826421-2826427,2827286-2827375,2827400-2827639,282... 31 6.3
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 31 8.3
>05_01_0033 + 220125-220190,220274-224445,224863-224949,225048-225084,
225296-225356,225666-226918
Length = 1891
Score = 1160 bits (2872), Expect = 0.0
Identities = 621/1341 (46%), Positives = 842/1341 (62%), Gaps = 42/1341 (3%)
Query: 16 KTNEILQKLKF-VDSDIKDLSTELCYHVELAEGCEYLNINQIKVLKWLLSSPLQPQAVRN 74
+T E+L++++ V S+I + TE C++++L L ++ L+WLL+ +P ++
Sbjct: 103 ETIELLRQVQAKVSSNIVGIKTEQCFNIQLDNA---LASEKLATLQWLLAETYEPDKLQA 159
Query: 75 ETIFK---SNDNSQLLIEIGPRFNFSTADSSNSVQICESVGLRDVVRLEVSTRYLITFGK 131
++ + + + +++E+GPR FSTA S+N+V IC+S+ L +V RLE S RYL+
Sbjct: 160 QSFLEEEVARNPYSVIVEVGPRMTFSTAFSTNAVSICKSLSLMEVTRLERSRRYLLCLDP 219
Query: 132 QKN-VTEKHFENLAAVLHDRMTQCVYTKDNLPRKSFNEGLPKDLEPWFVVPLQEQGISAM 190
+ E + A++HDRMT+CVY K SF+ + EP +VP+ E+G A+
Sbjct: 220 GYGPLDESQLNDFTALVHDRMTECVYPKK---LTSFHSDVVP--EPVRIVPVIERGREAL 274
Query: 191 RKVNDKLGLAFDTWDMEFYMDLFVNKLKRDPTSVELFDLAQSNSEHSRHWFFKGKLVLDG 250
++N K+GLAFD D+++Y LF + +KR+PT+VELFD+AQSNSEHSRHWFF GKLV+DG
Sbjct: 275 EEINVKMGLAFDEQDIKYYTHLFRDDIKRNPTTVELFDIAQSNSEHSRHWFFNGKLVIDG 334
Query: 251 KEINESLIDMVASTQKTS-NNNNVIKFGDNSSAIKGFQHTILRPTNVRGPSQVIQKKTES 309
+ + +L +V S K + +NN+VI F DNSSAIKG+ LRPT S + E
Sbjct: 335 ETMPRTLFQLVKSPLKANPDNNSVIGFNDNSSAIKGYPANQLRPTVPGSTSPLSVMMREL 394
Query: 310 DIIFTAETHNMPTAVAPFSGATTGTGGRIRDVQGVGRGGHTVAGTAGYSVGNLHIPGYDL 369
DI+FTAETHN P AVAP+ GA TG GGRIRD G+G VA TAGY VGNL I G
Sbjct: 395 DILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGKGSFVVASTAGYCVGNLRIEGAYA 454
Query: 370 PWEEKGWEYPSNFATPLQIIIEASNGASDYGNKFGEPVISGFVQSYGLKNADNTREEFVK 429
PWE+ + Y SN A+PLQI+I+AS+GASDYGNKFGEP+I GF +++G + + R E++K
Sbjct: 455 PWEDPSFSYLSNLASPLQILIDASDGASDYGNKFGEPLIQGFTRNFGTRLLNGERREWLK 514
Query: 430 PIMFSGGIGYMPHSMIKKNKPDKGMLLVKXXXXXXXXXXXXXXXXXXXXXXXDARDHALD 489
PIMFSG IG + H+ I K P+ GML+VK DA LD
Sbjct: 515 PIMFSGAIGQIDHAHISKGDPEIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAE---LD 571
Query: 490 FGAVQRGDAEMGNRLNRVVRGCLE-SDVNPVESIHDQGAGGNGNVLKELVEPEGAVVFTK 548
F AVQRGDAEM +L RVVR C E + NP+ SIHDQGAGGN NV+KE++ P+GA + +
Sbjct: 572 FNAVQRGDAEMAQKLYRVVRACAEMGESNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIR 631
Query: 549 EFQLGDPTITTLELWGAEYQENDALLCSKANRHILEEICRRERCPVSFVGEVTGDGYMSL 608
+GD T++ LE+WGAEYQE DALL +R +LE +C RER ++ +G + G G + L
Sbjct: 632 SIVVGDHTLSVLEIWGAEYQEQDALLVKPESRSLLESLCERERVSMAVIGTINGCGKIVL 691
Query: 609 IEDSYTEKFLDRSERLKLESKSKLPYDLHLEAVLGNMPRKTFDLQTEKRTKLPLSFPKDI 668
I+ + E ++ L + + DL LE VLG+MP+KTF+ + PL + +
Sbjct: 692 IDSAAVE----HAKLNGLPPPTPVE-DLELEKVLGDMPQKTFEFKRVSVVSEPLDIARGV 746
Query: 669 TVKSALDRVLRLVNVASKRYLTNKVDRCVTGLVAQQQCVGPLHTPLADCAIIALSYYDLV 728
T+ AL RVL L +V SKR+LT KVDRCVTGLVAQQQ VGPL PLAD A+IA +Y DL
Sbjct: 747 TIMDALKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQLPLADVAVIAQTYTDLT 806
Query: 729 GSATSIGTQNIKGLLDPAAGARLSLGEALTNLVFAGISELEDVKCSGNWMWAGKTGVEXX 788
G A +IG Q KGLL+P A ARL++GEALTNLV+A +S L DVK SGNWM+A K E
Sbjct: 807 GGACAIGEQPTKGLLNPKAMARLAIGEALTNLVWAKVSSLSDVKASGNWMYAAKLDGEGA 866
Query: 789 XXXXXXXXXXXXMRALGVAVDGGKDSLSMCAHVAGEKVKSPGTLVVSTYAPCPDITVKIE 848
M LG+A+DGGKDSLSM A GE VK+PG LV+S Y CPDIT+ +
Sbjct: 867 DMYDAAVALADCMIQLGIAIDGGKDSLSMAAQCDGEVVKAPGNLVISAYVTCPDITLTVT 926
Query: 849 PALK-EENSALVHAPVSPGKYRLGGSALAQCYKQLGDNXXXXXXXXXXKSLFKITQKLLK 907
P LK ++ L+H +S GK RLGGSALAQ + Q+G++ K F+ Q+LL
Sbjct: 927 PDLKLGKDGVLLHIDLSKGKRRLGGSALAQAFDQIGNDCPDIDDVLYLKKAFEAVQELLG 986
Query: 908 EKKLISGHDISEGGFITTVLEMGIGGVRGLNLHVNVAANVSPIEALFNEELGIVLEVSKN 967
E+ + +GHDIS+GG I +VLEM G G+ L+++ + + S ++ALF EELG++LEV
Sbjct: 987 ERLISAGHDISDGGLIVSVLEMAFAGNCGVKLNID-SEDSSLLQALFAEELGLLLEVHLK 1045
Query: 968 DLPYVLSEYNNNGVGAQHIGYTGKYGMDSQVVINLNGVNVLDTVLIDVFRMWEETSYRLE 1027
DL V + G+ A I GK + + ++G L D+ +WEETS++LE
Sbjct: 1046 DLSVVKQKLQAGGISANVI---GKVTASPDIELVVDGRLHLKEKTSDLRDIWEETSFQLE 1102
Query: 1028 CLQANTDCVLQEWKVLEKRKGATYNVTFDP--TAAVIKTKSI--KVAVLREEGINGDREM 1083
LQ CV E + L+ R +++++F P T + T S KVA+LREEG NGDREM
Sbjct: 1103 GLQRLKSCVRLEKEGLKHRTSPSWSLSFTPKFTDEKLLTASSKPKVAILREEGSNGDREM 1162
Query: 1084 IASLMLANFDVFDVTMSDLQNKKITLDAFQGVVFPGGFSYADTLGSAKGWAAGILFSESL 1143
A+ A F+ +D+TMSDL K +L+ ++G+ F GGFSYAD L SAKGWAA I F++ L
Sbjct: 1163 AAAFYAAGFEPWDITMSDLLAGKSSLEDYRGIAFVGGFSYADVLDSAKGWAASIRFNQPL 1222
Query: 1144 SSQFAHFKDRKDTFSLGVCNGCQLMAMLGWVDPD----SNSKGSNKAQIFLDHNSSERFE 1199
QF +F +R DTFSLGVCNGCQLMA+LGWV S G + +Q HN S RFE
Sbjct: 1223 IQQFQNFYNRPDTFSLGVCNGCQLMALLGWVPGSDVGGSLGSGGDMSQPRFIHNESGRFE 1282
Query: 1200 CRWSAVKIHENENKEDVWFRGMGGSVLGVWVAHGEGRFTVADGSLLDKLYKNGQVAVQYV 1259
CR+++V I + + F+GM GS +G+W AHGEGR D ++L + K+ V+Y
Sbjct: 1283 CRFTSVSIGAS---PAIMFKGMEGSTMGIWSAHGEGRAFFPDENVLASVVKSNLAPVRYC 1339
Query: 1260 DDDGKPTEVYPMNPNGSPDGLAGVRSRDGRHIAMMPHPERCVLRWQCPAPCPTVTNPSVR 1319
DD TEVYP NPNGSP G+A + S DGRH+AMMPHPERC + WQ P + + +
Sbjct: 1340 DDANNITEVYPFNPNGSPLGIAALCSPDGRHLAMMPHPERCFMMWQYPW---SPKDWQLE 1396
Query: 1320 NSQASPWLRLFQNAYSWAINH 1340
S SPWLR+FQNA + +
Sbjct: 1397 KSGPSPWLRMFQNARECCVTY 1417
>01_06_1608 - 38612754-38616947,38617030-38617095
Length = 1419
Score = 1157 bits (2866), Expect = 0.0
Identities = 619/1352 (45%), Positives = 843/1352 (62%), Gaps = 42/1352 (3%)
Query: 3 IVRFFSTEAFSLHKTNEILQKLKF-VDSDIKDLSTELCYHVELAEGCEYLNINQIKVLKW 61
+++ + +T E+L++++ V S+I + TE C++++L L ++ L+W
Sbjct: 94 VIQLYRIPYLQESETIELLRQVQAKVSSNIVGIKTEQCFNIQLDNA---LTPEKLATLQW 150
Query: 62 LLSSPLQPQAVRNETIFK---SNDNSQLLIEIGPRFNFSTADSSNSVQICESVGLRDVVR 118
LL+ +P ++ ++ + S +++E+GPR FSTA S+N+V IC+S+ L +V R
Sbjct: 151 LLAETYEPDKLQAQSFLEEEISRSPYSVIVEVGPRMTFSTAFSTNAVSICKSLSLMEVTR 210
Query: 119 LEVSTRYLITFGKQKN-VTEKHFENLAAVLHDRMTQCVYTKDNLPRKSFNEGLPKDLEPW 177
LE S RYL+ + E + AA++HDRMT+CVY N ++ +P EP
Sbjct: 211 LERSRRYLLCLDPGNGPLDESQLNDFAALVHDRMTECVYP--NKLTSFHSDVVP---EPV 265
Query: 178 FVVPLQEQGISAMRKVNDKLGLAFDTWDMEFYMDLFVNKLKRDPTSVELFDLAQSNSEHS 237
+VP+ E+G A+ ++N K+GLAFD D+++Y LF + +KR+PT+VELFD+AQSNSEHS
Sbjct: 266 RIVPVIERGREALEEINVKMGLAFDEQDIKYYTHLFRDDIKRNPTTVELFDIAQSNSEHS 325
Query: 238 RHWFFKGKLVLDGKEINESLIDMVASTQKTS-NNNNVIKFGDNSSAIKGFQHTILRPTNV 296
RHWFF GKLV+DG+ + ++L +V S K + +NN+VI F DNSSAIKG+ LRPT
Sbjct: 326 RHWFFNGKLVIDGETMPKTLFQLVKSPLKANPDNNSVIGFKDNSSAIKGYPANQLRPTIP 385
Query: 297 RGPSQVIQKKTESDIIFTAETHNMPTAVAPFSGATTGTGGRIRDVQGVGRGGHTVAGTAG 356
S + E DI+FTAETHN P AVAP+ GA TG GGRIRD G+G VA TAG
Sbjct: 386 GSTSPLSVMMRELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGKGSFVVASTAG 445
Query: 357 YSVGNLHIPGYDLPWEEKGWEYPSNFATPLQIIIEASNGASDYGNKFGEPVISGFVQSYG 416
Y VGNL + G PWE+ + YPSN A+PLQI+++AS+GASDYGNKFGEP+I GF +++G
Sbjct: 446 YCVGNLRMEGSYAPWEDPSFSYPSNLASPLQILVDASDGASDYGNKFGEPLIQGFTRNFG 505
Query: 417 LKNADNTREEFVKPIMFSGGIGYMPHSMIKKNKPDKGMLLVKXXXXXXXXXXXXXXXXXX 476
++ + R E++KPIMFSG IG + H+ I K P+ GML+VK
Sbjct: 506 MRLLNGERREWLKPIMFSGAIGQIDHAHISKGDPEIGMLVVKIGGPAYRIGMGGGAASSM 565
Query: 477 XXXXXDARDHALDFGAVQRGDAEMGNRLNRVVRGCLE-SDVNPVESIHDQGAGGNGNVLK 535
DA LDF AVQRGDAEM +L RVVR C E + NP+ SIHDQGAGGN NV+K
Sbjct: 566 VSGQNDAE---LDFNAVQRGDAEMAQKLYRVVRACAEMGESNPIISIHDQGAGGNCNVVK 622
Query: 536 ELVEPEGAVVFTKEFQLGDPTITTLELWGAEYQENDALLCSKANRHILEEICRRERCPVS 595
E++ P+GA + + +GD T++ LE+WGAEYQE DALL +R +LE +C RER ++
Sbjct: 623 EIIYPKGAEIDIRSIVVGDHTLSVLEIWGAEYQEQDALLVKPESRSLLESLCERERVSMA 682
Query: 596 FVGEVTGDGYMSLIEDSYTEKFLDRSERLKLESKSKLPYDLHLEAVLGNMPRKTFDLQTE 655
+G + G G + LI+ + E ++ L + + DL LE VLG+MP+KTF+ +
Sbjct: 683 VIGTIDGCGKIVLIDSAAME----HAKINGLPPPTPVE-DLELEKVLGDMPQKTFEFKRV 737
Query: 656 KRTKLPLSFPKDITVKSALDRVLRLVNVASKRYLTNKVDRCVTGLVAQQQCVGPLHTPLA 715
PL +T+ AL RVL L ++ SKR+LT KVDRCVTGLVAQQQ VGPL PLA
Sbjct: 738 SLVSEPLDIAPGVTIMDALKRVLSLPSICSKRFLTTKVDRCVTGLVAQQQTVGPLQLPLA 797
Query: 716 DCAIIALSYYDLVGSATSIGTQNIKGLLDPAAGARLSLGEALTNLVFAGISELEDVKCSG 775
D A+IA +Y DL G A +IG Q KGLL+P A ARL++GEALTNLV+A +S L DVK SG
Sbjct: 798 DVAVIAQTYTDLTGGACAIGEQPAKGLLNPKAMARLAVGEALTNLVWAKVSSLSDVKASG 857
Query: 776 NWMWAGKTGVEXXXXXXXXXXXXXXMRALGVAVDGGKDSLSMCAHVAGEKVKSPGTLVVS 835
NWM+A K E M LG+A+DGGKDSLSM A GE VK+PG LV+S
Sbjct: 858 NWMYAAKLDGEGADMYDAAVALADCMIQLGIAIDGGKDSLSMAAQCDGEVVKAPGNLVIS 917
Query: 836 TYAPCPDITVKIEPALKEEN-SALVHAPVSPGKYRLGGSALAQCYKQLGDNXXXXXXXXX 894
Y CPDIT+ + P LK N L+H + GK RLGGSALAQ + Q+G++
Sbjct: 918 AYVTCPDITLTVTPDLKLGNDGVLLHIDLGKGKRRLGGSALAQAFDQIGNDCPDIDDVPY 977
Query: 895 XKSLFKITQKLLKEKKLISGHDISEGGFITTVLEMGIGGVRGLNLHVNVAANVSPIEALF 954
K F+ Q+LL ++ + +GHDIS+GG I +VLEM G G+ L+++ + + ++ALF
Sbjct: 978 LKKAFEAVQELLSQRLISAGHDISDGGLIVSVLEMAFAGNCGVKLNID-SEDSGLLQALF 1036
Query: 955 NEELGIVLEVSKNDLPYVLSEYNNNGVGAQHIGYTGKYGMDSQVVINLNGVNVLDTVLID 1014
EELG++LEV DL V + G+ A IG D ++V+ +G L D
Sbjct: 1037 AEELGLLLEVHLKDLSVVKQKLEAGGISANVIGQV-TASPDIELVV--DGRLHLKEKTSD 1093
Query: 1015 VFRMWEETSYRLECLQANTDCVLQEWKVLEKRKGATYNVTFDP--TAAVIKTKSI--KVA 1070
+ +WEETS++LE LQ CV E + L+ R +++++F P T + T S KVA
Sbjct: 1094 LRDIWEETSFQLEGLQRLKSCVRLEKEGLKHRTSPSWSLSFTPKFTDEKLLTASSKPKVA 1153
Query: 1071 VLREEGINGDREMIASLMLANFDVFDVTMSDLQNKKITLDAFQGVVFPGGFSYADTLGSA 1130
++REEG NGDREM A+ A F+ +D+TMSDL K +L+ ++G+ F GGFSYAD L SA
Sbjct: 1154 IIREEGSNGDREMAAAFYAAGFEPWDITMSDLLAGKSSLEEYRGIAFVGGFSYADVLDSA 1213
Query: 1131 KGWAAGILFSESLSSQFAHFKDRKDTFSLGVCNGCQLMAMLGWV---DPDSN-SKGSNKA 1186
KGWAA I F++ L QF +F +R DTFSLGVCNGCQLMA+LGWV D S+ G + +
Sbjct: 1214 KGWAASIRFNQPLIQQFQNFYNRPDTFSLGVCNGCQLMALLGWVPGSDVGSSLGSGGDMS 1273
Query: 1187 QIFLDHNSSERFECRWSAVKIHENENKEDVWFRGMGGSVLGVWVAHGEGRFTVADGSLLD 1246
Q HN S RFECR+++V I + F+GM GS LG+W AHGEGR D ++L
Sbjct: 1274 QPRFIHNESGRFECRFTSVSI---GTSPAIMFKGMEGSTLGIWSAHGEGRAFFPDENVLA 1330
Query: 1247 KLYKNGQVAVQYVDDDGKPTEVYPMNPNGSPDGLAGVRSRDGRHIAMMPHPERCVLRWQC 1306
+ + V+Y DD TEVYP NPNGSP G+A + S DGRH+AMMPHPERC + WQ
Sbjct: 1331 SVVNSNLAPVRYCDDANNITEVYPFNPNGSPLGIAALCSPDGRHLAMMPHPERCFMMWQY 1390
Query: 1307 PAPCPTVTNPSVRNSQASPWLRLFQNAYSWAI 1338
P + SPWLR+FQNA W +
Sbjct: 1391 PW---YPKEWQLEKCGPSPWLRMFQNAREWCL 1419
>02_05_0076 + 25637752-25639062,25639221-25639297,25640962-25641095,
25641178-25641242,25641431-25641482,25641912-25641994,
25642128-25642221,25642332-25642861
Length = 781
Score = 33.9 bits (74), Expect = 0.89
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 1031 ANTDCVLQEWKVLE----KRKGATYNVTFDPTAAVIKTK---SIKVAVLREEGINGDREM 1083
A DCV+ W+VLE + KG N FDP + ++ T S + LR + ++ R +
Sbjct: 340 AGEDCVIHVWEVLEWKMIEEKGLEENGVFDPESMLVSTASEGSHREKKLRAKAVHNQRSV 399
Query: 1084 IASLMLANFDVF 1095
+ ++ VF
Sbjct: 400 SSDRLMVPEHVF 411
>04_04_0773 - 27974909-27977191
Length = 760
Score = 32.7 bits (71), Expect = 2.1
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 322 TAVAPFSGATTGTGGRIRDVQGVGRGGHTVAGTAGYSVGNLHIPGYDL 369
T +A + +++ G R+ V VG G HT + AG +V H+ G L
Sbjct: 189 TFIANATNSSSSYGERLPPVDDVGHGTHTASTAAGAAVPGAHVLGQGL 236
>01_06_1119 -
34640611-34640721,34640995-34641075,34641437-34641496,
34641596-34641645,34641758-34641809,34642462-34642599,
34642716-34642979,34643057-34643114,34643178-34643287,
34643650-34643925
Length = 399
Score = 31.9 bits (69), Expect = 3.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 659 KLPLSFPKDITVKSALDRVLRLVNVASKRYLTNKVDRCVTGLVAQQQCVGP 709
++P + D+ + V +L+ YL N VD CV + A+ + +GP
Sbjct: 72 EIPEEYVDDVDAVNIAQDVTQLIGKTPMVYLNNVVDGCVANIAAKLEYMGP 122
>03_02_0853 + 11786022-11786105,11786509-11786592,11786915-11787925
Length = 392
Score = 31.5 bits (68), Expect = 4.7
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 329 GATTGTGGRIRDVQGVGRGGHTVAGTAGYSVGNLHI-PGYDLPWEEKGWEYPSNFATP 385
G T G GR R V G+ A T+G+++G+L + PG DL + P+ TP
Sbjct: 204 GDTPGDSGRERLVLVTPADGNGAAATSGFTLGDLFLGPGLDLLLDYLADTDPNRQGTP 261
>07_01_0378 +
2826421-2826427,2827286-2827375,2827400-2827639,
2827722-2828035,2828604-2828696,2828789-2828977
Length = 310
Score = 31.1 bits (67), Expect = 6.3
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 325 APFSGATTGTGGRIRDVQGVGRGGHTVAGTAGYSVGNLHIPGYDLPWEEKGWEYPSNFAT 384
APF + GT + + G + G TV T N++ P P ++ W+ S +
Sbjct: 51 APFKPPSGGTTSDVVEASGTAKPGETVTATERNLSANVNNP-VSRPMPQRPWQQTSGYGN 109
Query: 385 PLQIIIEASNGASDYGNKFGEPVISG 410
SN S YG FG SG
Sbjct: 110 TYGGY--GSNMYSSYGG-FGNTYGSG 132
>12_02_0973 +
24959440-24959451,24959962-24962195,24962539-24962653,
24963146-24963943,24964140-24964422,24964500-24964951,
24965744-24965870,24965950-24966074,24966188-24966858,
24966976-24967093,24967177-24967293,24967564-24967658,
24968152-24968303,24968858-24968913,24969001-24969218,
24969842-24970239,24970345-24970628,24970730-24970836,
24970882-24970968,24971729-24971990,24972228-24972503,
24973197-24973254,24973437-24973756,24973889-24973999,
24974183-24974350,24974494-24974622,24974731-24974820,
24974934-24975040,24975133-24975281,24975584-24975666,
24975749-24975844,24975957-24976079,24976180-24976263,
24976371-24976511,24976652-24976951,24977386-24977453,
24977540-24977642,24979363-24979524,24979613-24981230,
24981270-24981661,24981689-24981991,24982078-24982161,
24982296-24982448,24982678-24982841,24982915-24983062,
24983209-24983331,24983409-24983496,24983686-24983867
Length = 4177
Score = 30.7 bits (66), Expect = 8.3
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 354 TAGYSVGNLHIPGYDLPWEEKGWEYPSNFATPLQIIIEASNGASDYGNKFG 404
TA + NLH+ + + WE F L +I+E ++ DY + G
Sbjct: 118 TASVRLDNLHLTAFGIHVASAFWEIAPKFIPSLMVILEITSQKEDYEVRSG 168
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,761,778
Number of Sequences: 37544
Number of extensions: 1716418
Number of successful extensions: 4017
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3981
Number of HSP's gapped (non-prelim): 12
length of query: 1340
length of database: 14,793,348
effective HSP length: 91
effective length of query: 1249
effective length of database: 11,376,844
effective search space: 14209678156
effective search space used: 14209678156
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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