Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000389-TA|BGIBMGA000389-PA|undefined
(155 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 30 0.61
At1g33280.1 68414.m04116 no apical meristem (NAM) family protein... 30 0.61
At3g61910.1 68416.m06953 no apical meristem (NAM) family protein... 29 1.4
At5g63790.1 68418.m08006 no apical meristem (NAM) family protein... 28 3.3
At3g13772.1 68416.m01738 endomembrane protein 70, putative TM4 f... 28 3.3
At1g71930.1 68414.m08315 no apical meristem (NAM) family protein... 28 3.3
At1g54330.1 68414.m06194 no apical meristem (NAM) family protein... 28 3.3
At1g32770.1 68414.m04040 no apical meristem (NAM) family protein... 28 3.3
At3g10490.2 68416.m01259 no apical meristem (NAM) family protein... 27 4.3
At3g10490.1 68416.m01258 no apical meristem (NAM) family protein... 27 4.3
At2g46770.1 68415.m05835 no apical meristem (NAM) family protein... 27 4.3
At3g61570.1 68416.m06896 intracellular protein transport protein... 27 5.7
At5g08790.1 68418.m01042 no apical meristem (NAM) family protein... 27 7.5
At4g36160.1 68417.m05146 no apical meristem (NAM) family protein... 27 7.5
At4g27410.2 68417.m03938 no apical meristem (NAM) family protein... 27 7.5
At3g15500.1 68416.m01965 no apical meristem (NAM) family protein... 27 7.5
At3g03200.1 68416.m00316 no apical meristem (NAM) family protein... 27 7.5
At2g24430.2 68415.m02920 no apical meristem (NAM) family protein... 27 7.5
At2g24430.1 68415.m02919 no apical meristem (NAM) family protein... 27 7.5
At2g18060.1 68415.m02100 no apical meristem (NAM) family protein... 27 7.5
At1g79580.3 68414.m09279 no apical meristem (NAM) family protein... 27 7.5
At1g79580.2 68414.m09278 no apical meristem (NAM) family protein... 27 7.5
At1g79580.1 68414.m09277 no apical meristem (NAM) family protein... 27 7.5
At1g77450.1 68414.m09019 no apical meristem (NAM) family protein... 27 7.5
At1g52890.1 68414.m05980 no apical meristem (NAM) family protein... 27 7.5
At1g01720.1 68414.m00090 no apical meristem (NAM) family protein... 27 7.5
At1g76420.1 68414.m08883 no apical meristem (NAM) family protein... 26 10.0
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 30.3 bits (65), Expect = 0.61
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 44 TAANAWYIYSNFDRNYPDGS 63
T N WY +S+ DR YP GS
Sbjct: 63 TPQNEWYFFSHKDRKYPTGS 82
>At1g33280.1 68414.m04116 no apical meristem (NAM) family protein
similar to CUC1 (GP:12060422) {Arabidopsis thaliana}
amd to NAM (GP:1279640) {Petunia x hybrida}
Length = 305
Score = 30.3 bits (65), Expect = 0.61
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 44 TAANAWYIYSNFDRNYPDGS 63
T N WY +S+ DR YP GS
Sbjct: 62 TPQNEWYFFSHKDRKYPTGS 81
>At3g61910.1 68416.m06953 no apical meristem (NAM) family protein
no apical meristem (NAM) - Petunia hybrida,
EMBL:PHDNANAM
Length = 334
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 44 TAANAWYIYSNFDRNYPDGS 63
T N WY YS+ D+ YP G+
Sbjct: 65 TPQNDWYFYSHKDKKYPTGT 84
>At5g63790.1 68418.m08006 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
contains similarity to NAC-domain protein
Length = 312
Score = 27.9 bits (59), Expect = 3.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 49 WYIYSNFDRNYPDGS 63
WY +S+ DR YP+GS
Sbjct: 106 WYFFSHRDRKYPNGS 120
>At3g13772.1 68416.m01738 endomembrane protein 70, putative TM4
family;
Length = 641
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 28 LLADETNTFEETDDLKTAANAWYIYSNFD----RNYPDGS-SSVYRHGFVTGFE 76
L AD T F+E D + AN I N R DGS S+ Y HGF GF+
Sbjct: 112 LNADSTKNFKEKIDDEYRANM--ILDNLPVAVLRQRRDGSQSTTYEHGFRVGFK 163
>At1g71930.1 68414.m08315 no apical meristem (NAM) family protein
similar to NAM GB:CAA63101 from [Petunia x hybrida]
Length = 324
Score = 27.9 bits (59), Expect = 3.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 47 NAWYIYSNFDRNYPDGS 63
N WY +S+ DR YP G+
Sbjct: 66 NEWYFFSHKDRKYPTGT 82
>At1g54330.1 68414.m06194 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to NAM protein GI:1279639 from [Petunia
hybrida]
Length = 298
Score = 27.9 bits (59), Expect = 3.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 49 WYIYSNFDRNYPDGS 63
WY YS D+ YP+GS
Sbjct: 61 WYFYSTRDKKYPNGS 75
>At1g32770.1 68414.m04040 no apical meristem (NAM) family protein
similar to OsNAC7 protein GB:BAA89801 GI:6730944 from
[Oryza sativa]
Length = 358
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 44 TAANAWYIYSNFDRNYPDGSSSVYRHGFVTGF 75
T N WY +S+ D+ YP G+ + V GF
Sbjct: 70 TPQNDWYFFSHKDKKYPTGTRT--NRATVAGF 99
>At3g10490.2 68416.m01259 no apical meristem (NAM) family protein
similar to to NAC2 (GI:645671) [Arabidopsis thaliana];
contains Pfam PF02365: No apical meristem (NAM) protein
Length = 451
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 42 LKTAANAWYIYSNFDRNYPDGS 63
LKT WY YS D+ Y +G+
Sbjct: 78 LKTRDQEWYFYSALDKKYGNGA 99
>At3g10490.1 68416.m01258 no apical meristem (NAM) family protein
similar to to NAC2 (GI:645671) [Arabidopsis thaliana];
contains Pfam PF02365: No apical meristem (NAM) protein
Length = 238
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 42 LKTAANAWYIYSNFDRNYPDGS 63
LKT WY YS D+ Y +G+
Sbjct: 78 LKTRDQEWYFYSALDKKYGNGA 99
>At2g46770.1 68415.m05835 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 365
Score = 27.5 bits (58), Expect = 4.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 44 TAANAWYIYSNFDRNYPDGS 63
T N WY +S+ D+ YP G+
Sbjct: 70 TPQNDWYFFSHKDKKYPTGT 89
>At3g61570.1 68416.m06896 intracellular protein transport protein
USO1-related contains weak similarity to intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]
Length = 712
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 21 EAALHENLLADETNTFEETDDLKTAANAWYIYSNFDRNYPDGSSSVYRHGFVTGFE 76
+A LH+ +L D EE DDL +A + SN DR G SV R+ G E
Sbjct: 9 KANLHKIVL-DVHEDDEEEDDLHKYGSANGV-SNSDRRNSSGFRSVSRYSISNGIE 62
>At5g08790.1 68418.m01042 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 283
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 49 WYIYSNFDRNYPDGS 63
WY +S DR YP+GS
Sbjct: 63 WYFFSPRDRKYPNGS 77
>At4g36160.1 68417.m05146 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) [Arabidopsis thaliana];
contains Pfam PF02365 : No apical meristem (NAM)
protein
Length = 377
Score = 26.6 bits (56), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 47 NAWYIYSNFDRNYPDGS 63
N WY +S+ D+ YP G+
Sbjct: 67 NEWYFFSHKDKKYPTGT 83
>At4g27410.2 68417.m03938 no apical meristem (NAM) family protein
(RD26) contains Pfam PF02365: No apical meristem (NAM)
domain; Arabidopsis thaliana nap gene,PID:e1234813;
identical to cDNA RD26 mRNA for NAM-like protein
GI:15375403
Length = 297
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 49 WYIYSNFDRNYPDGS 63
WY +S DR YP+GS
Sbjct: 70 WYFFSPRDRKYPNGS 84
>At3g15500.1 68416.m01965 no apical meristem (NAM) family protein
(NAC3) identical to AtNAC3 [Arabidopsis thaliana]
GI:12060424; contains Pfam PF02365: No apical meristem
(NAM) domain; similar to jasmonic acid 2 GB:AAF04915
from [Lycopersicon esculentum]
Length = 317
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 49 WYIYSNFDRNYPDGS 63
WY +S DR YP+GS
Sbjct: 70 WYFFSPRDRKYPNGS 84
>At3g03200.1 68416.m00316 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) {Arabidopsis thaliana}
Length = 479
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 49 WYIYSNFDRNYPDGS 63
WY +S DR YP+GS
Sbjct: 56 WYFFSPRDRKYPNGS 70
>At2g24430.2 68415.m02920 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 316
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 31 DETNTFEETDDLKTAANAWYIYSNFDRNYPDG 62
+++ +E + K WY +S DR YP G
Sbjct: 54 NKSEPWELPEKAKMGGKEWYFFSLRDRKYPTG 85
>At2g24430.1 68415.m02919 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
Length = 316
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 31 DETNTFEETDDLKTAANAWYIYSNFDRNYPDG 62
+++ +E + K WY +S DR YP G
Sbjct: 54 NKSEPWELPEKAKMGGKEWYFFSLRDRKYPTG 85
>At2g18060.1 68415.m02100 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) [Arabidopsis thaliana];
contains Pfam PF02365 : No apical meristem (NAM)
protein
Length = 365
Score = 26.6 bits (56), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 47 NAWYIYSNFDRNYPDGS 63
N WY +S+ D+ YP G+
Sbjct: 66 NEWYFFSHKDKKYPTGT 82
>At1g79580.3 68414.m09279 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 26.6 bits (56), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 47 NAWYIYSNFDRNYPDGS 63
N WY +S+ D+ YP G+
Sbjct: 74 NEWYFFSHKDKKYPTGT 90
>At1g79580.2 68414.m09278 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 26.6 bits (56), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 47 NAWYIYSNFDRNYPDGS 63
N WY +S+ D+ YP G+
Sbjct: 74 NEWYFFSHKDKKYPTGT 90
>At1g79580.1 68414.m09277 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 26.6 bits (56), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 47 NAWYIYSNFDRNYPDGS 63
N WY +S+ D+ YP G+
Sbjct: 74 NEWYFFSHKDKKYPTGT 90
>At1g77450.1 68414.m09019 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to GRAB1 protein GB:CAA09371, a novel member of
the NAC domain family
Length = 253
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 49 WYIYSNFDRNYPDGS 63
WY +S DR YP+GS
Sbjct: 66 WYFFSPRDRKYPNGS 80
>At1g52890.1 68414.m05980 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to NAM (no apical meristem) GB:CAA63101 from
[Petunia x hybrida]
Length = 317
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 49 WYIYSNFDRNYPDGS 63
WY +S DR YP+GS
Sbjct: 70 WYFFSPRDRKYPNGS 84
>At1g01720.1 68414.m00090 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to NAC domain protein NAM GB:AAD17313
GI:4325282 from [Arabidopsis thaliana]
Length = 289
Score = 26.6 bits (56), Expect = 7.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 49 WYIYSNFDRNYPDGS 63
WY +S DR YP+GS
Sbjct: 63 WYFFSPRDRKYPNGS 77
>At1g76420.1 68414.m08883 no apical meristem (NAM) family protein
N-term similar to N-term of NAM GB:CAA63101 [Petunia x
hybrida] (apical meristem formation), CUC2 GB:BAA19529
[Arabidopsis thaliana], GRAB2 protein GB:CAA09372
[Triticum sp.]
Length = 334
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 43 KTAANAWYIYSNFDRNYPDG 62
K WY YS DR YP G
Sbjct: 72 KMGEREWYFYSLRDRKYPTG 91
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,537,167
Number of Sequences: 28952
Number of extensions: 71541
Number of successful extensions: 237
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 209
Number of HSP's gapped (non-prelim): 30
length of query: 155
length of database: 12,070,560
effective HSP length: 75
effective length of query: 80
effective length of database: 9,899,160
effective search space: 791932800
effective search space used: 791932800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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