GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000389-TA|BGIBMGA000389-PA|undefined
         (155 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LG14 Cluster: TPR-repeat-containing protein; n=1; Par...    34   1.2  
UniRef50_Q6G4M7 Cluster: Hypothetical prophage protein; n=1; Bar...    33   2.1  
UniRef50_A7QRN5 Cluster: Chromosome undetermined scaffold_151, w...    32   4.9  
UniRef50_Q8A848 Cluster: TPR-domain containing protein; n=1; Bac...    31   8.6  
UniRef50_Q2SGC1 Cluster: Putative uncharacterized protein; n=1; ...    31   8.6  
UniRef50_Q5UUY9 Cluster: Putative hydrolase-like protein; n=1; A...    31   8.6  

>UniRef50_A6LG14 Cluster: TPR-repeat-containing protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep:
           TPR-repeat-containing protein - Parabacteroides
           distasonis (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 588

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 26  ENLLADETNTFEETDDLKTAANAWYIYSNF--DRNYPDGSSSVY 67
           ++L+   T+ +EETDDL+  A AWY       D+N+P  +   Y
Sbjct: 82  DSLITIATDYYEETDDLERKAKAWYYRGRISQDQNHPLKAQECY 125


>UniRef50_Q6G4M7 Cluster: Hypothetical prophage protein; n=1;
           Bartonella henselae|Rep: Hypothetical prophage protein -
           Bartonella henselae (Rochalimaea henselae)
          Length = 441

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 21  EAALHENLLADETNTFEETDDL---KTAANAWYIYSNFDRNYPDGSS 64
           E+AL+  + AD+T TF +  D+   K AAN + +Y + + N+  GS+
Sbjct: 62  ESALNGKMAADKTFTFADLSDIEGAKDAANNYVLYKSSNNNFTFGSA 108


>UniRef50_A7QRN5 Cluster: Chromosome undetermined scaffold_151,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_151, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 566

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 42  LKTAANAWYIYSNFDRNYPDG--SSSVYRHGF 71
           LKT    W+ +S  DR YP+G  S+   RHG+
Sbjct: 71  LKTGDRQWFFFSPRDRKYPNGARSNRATRHGY 102


>UniRef50_Q8A848 Cluster: TPR-domain containing protein; n=1;
           Bacteroides thetaiotaomicron|Rep: TPR-domain containing
           protein - Bacteroides thetaiotaomicron
          Length = 478

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 18  LKTEAALHENLLADETN---TFEETDDLKTAANAWYIYSNFDRNYPDGS 63
           LK E  L+E  L +  N   T E+ D+L+T  N  Y+Y   D  YP+ +
Sbjct: 105 LKAELMLNEGQLENARNVLDTIEDADELETIINIVYLY--MDMGYPEAA 151


>UniRef50_Q2SGC1 Cluster: Putative uncharacterized protein; n=1;
          Hahella chejuensis KCTC 2396|Rep: Putative
          uncharacterized protein - Hahella chejuensis (strain
          KCTC 2396)
          Length = 152

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 23 ALHENLLADETNTFEETDDLKTAANAW-YIYSNFDRNYPDGSSSVY 67
          A HE LL D  N FE+T ++K A N W Y Y      +P     ++
Sbjct: 44 ARHETLLFDVINGFEQTSEVK-ALNTWCYEYLEMHPTHPLADGEIH 88


>UniRef50_Q5UUY9 Cluster: Putative hydrolase-like protein; n=1;
           Antonospora locustae|Rep: Putative hydrolase-like
           protein - Antonospora locustae (Nosema locustae)
          Length = 372

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 30  ADETNTFEETDDLKTAANAWYIYSNFDRNYPDGSSSVYRHGF 71
           ADE +  EE ++L   + A  + +  D N+  G   V+RH F
Sbjct: 233 ADEISPMEEAEELSRKSGAKLVITKGDHNHTIGDPEVWRHVF 274


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,564,600
Number of Sequences: 1657284
Number of extensions: 3288310
Number of successful extensions: 6932
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6929
Number of HSP's gapped (non-prelim): 7
length of query: 155
length of database: 575,637,011
effective HSP length: 94
effective length of query: 61
effective length of database: 419,852,315
effective search space: 25610991215
effective search space used: 25610991215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 68 (31.5 bits)