GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000388-TA|BGIBMGA000388-PA|IPR000618|Insect cuticle
protein, IPR008160|Collagen triple helix repeat
         (1624 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    29   1.00 
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    29   1.00 
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    29   1.00 
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    29   1.3  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 136 ENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           E+R  D VV G Y  VD +G  R   Y AD H
Sbjct: 42  ESRDGD-VVQGSYSVVDPDGTKRTVDYTADPH 72


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 110 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 141


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 102 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 133


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 102 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 133


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 102 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 133


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 102 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 133


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 110 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 141


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 134 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 165


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 102 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 133


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 110 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 141


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 102 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 133


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 110 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 141


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 102 HETRHGDEV-HGQYSLLDSDGHQRIVDYHADHH 133


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 135 HENRGPDGVVYGCYGYVDTEGYLRATHYVADSH 167
           HE R  D V +G Y  +D++G+ R   Y AD H
Sbjct: 110 HETRHGDEV-HGQYSLLDSDGHHRIVDYHADHH 141


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.134    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,418
Number of Sequences: 2123
Number of extensions: 21211
Number of successful extensions: 91
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77
Number of HSP's gapped (non-prelim): 14
length of query: 1624
length of database: 516,269
effective HSP length: 73
effective length of query: 1551
effective length of database: 361,290
effective search space: 560360790
effective search space used: 560360790
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)