Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000384-TA|BGIBMGA000384-PA|IPR008973|C2
calcium/lipid-binding region, CaLB
(318 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 32 0.12
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 31 0.22
SPBC17A3.09c |||lipoate-protein ligase A |Schizosaccharomyces po... 29 0.87
SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces ... 29 1.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.7
SPBC29A3.21 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 3.5
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 27 4.7
SPAC22E12.16c |pik1||phosphatidylinositol kinase Pik1|Schizosacc... 27 4.7
SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr 1||... 27 4.7
SPAC1952.07 |rad1||checkpoint clamp complex protein Rad1|Schizos... 27 4.7
SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr 2||... 26 6.1
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 26 6.1
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 26 8.1
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 8.1
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 31.9 bits (69), Expect = 0.12
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 31 FQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADK---RKNSKTIDTKNAKV 87
F+ K+ E + S +++L NL S + + A L+ Q +K S+ + +NA
Sbjct: 960 FKKKKNEQRSQSFQVELSNLTSEYDTTTESIATLKTELQSLNKYVDEHKSRLREFENALW 1019
Query: 88 GDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRTVGAATWNFDSK 137
F+E + KAE I ++ ++++RT + N ++K
Sbjct: 1020 DINSSIDELVKFIEFESKQMNSVKAERIELENQIQEQRTALSEVGNNENK 1069
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 31.1 bits (67), Expect = 0.22
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 34 KQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEP 93
+Q++ ++K+DL ++S S+ +L+ K+E ++ K + + + +
Sbjct: 608 EQEQVSNQANKVDLNKIISAAMESVNQKNVLKAQKEEEERIAQQKREEKRRLAYEESLKR 667
Query: 94 KAKTGFLEKTFSSFKAT--------KAEAIAQKSILEK 123
AK +KT SS AT E+IA K++L K
Sbjct: 668 HAKKLHEKKTKSSQDATIDHHLTSHSPESIAFKAVLAK 705
>SPBC17A3.09c |||lipoate-protein ligase A |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 29.1 bits (62), Expect = 0.87
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 77 SKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRTVGAATWNFDS 136
SK + + + V + + KA+ F+++ S F K+ + K L K R ++ +
Sbjct: 193 SKGVSSTRSPVSNTKLLKAE--FIKQVISCFLLHKSHSTTTKP-LSKPRASSKRLYDIEP 249
Query: 137 KLFQNDLKNGLIGTPDIWRPINAIAS 162
K +N L+G P I + +N + S
Sbjct: 250 KSVITLEQNDLLGVPSILKAVNELQS 275
>SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 62 AILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKA 112
+ +P +EA K + S +DT +A + EE G + T S+ K KA
Sbjct: 48 SFFDPSNEEASKLRESFAMDTLDALLQWFEEEDGVVGIFDATNSTSKRRKA 98
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 208 TMQEHEKYKAPLYLKATILEANKAECFWKSDRF-----VPTISARWDPKSATVRLSVFKA 262
++++H + + L K + LEA AEC +++ PT + + +P +TV L F +
Sbjct: 1393 SLEKHNQIRQQLSQKTSELEAKVAECHQLNEQLNKPSATPTATTQSEP--STVSLEEFNS 1450
Query: 263 SLDQVS 268
+ +++S
Sbjct: 1451 TKEELS 1456
>SPBC29A3.21 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 100
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 178 LEVTLLYTASEDGLNDVVQLTVNRLRCSVHTMQEHEKYKAPL-YLKATILEAN 229
L T+++ +E L+ V QL V C+VH + + Y A + Y + + +N
Sbjct: 13 LSHTVVFCFTEVSLHIVKQLGVESYACTVHASRFQKSYSASIDYCQRFLFSSN 65
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 65 EPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILE 122
E P + RKNS T K + + K++ FL+K+ S + + SI+E
Sbjct: 129 EKPVKSKQLRKNSVTEFEKPIETKKSKHRKSRNKFLDKSSGSMEIESWDNSTSDSIIE 186
>SPAC22E12.16c |pik1||phosphatidylinositol kinase
Pik1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 169 KRGENTKGQLEVTLLYTASEDGLNDVVQLTVNRLRCSVHT 208
+ GENT QL + +D V L + + CSV T
Sbjct: 798 RAGENTSAQLLQRFQLQLGDKECDDFVDLLIQKANCSVWT 837
>SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1101
Score = 26.6 bits (56), Expect = 4.7
Identities = 22/93 (23%), Positives = 38/93 (40%)
Query: 60 IYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKS 119
+Y + E K E D+ ++ +T N ++ P +K SSF K + S
Sbjct: 813 LYPLSEKEKIEGDELYDNILKETFNEELLSHYPPNIIYATFQKYLSSFINRKFGVLLSSS 872
Query: 120 ILEKRRTVGAATWNFDSKLFQNDLKNGLIGTPD 152
+++ TV +F+S LK L P+
Sbjct: 873 FIQQLNTVENLNLSFNSTDAVYHLKKILQDLPE 905
>SPAC1952.07 |rad1||checkpoint clamp complex protein
Rad1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 323
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 96 KTGFLEKTFSSFKATKAEAIAQKSILEKRRTVGAATWNFDSKLFQNDLKNGLIGT 150
K+ FL + + T+ E +KS+LE T T+++ L ++ LK +G+
Sbjct: 191 KSTFLLRCVGALSTTEIEYPNEKSVLESFETDSENTYSYRFSLIRHALKALQVGS 245
>SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 23 PVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGH 54
PV ++ FQ+KQ + +SD LQ +V G+
Sbjct: 78 PVEIQELTFQIKQSLSSLNSDIASLQQVVKGN 109
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 26.2 bits (55), Expect = 6.1
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 5 KVFPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKI--DLQNLVS--GHFLSLTI 60
K+FPG++ Y + + P ED F + K +KS+ +I N+ S G ++
Sbjct: 322 KLFPGDNPYSFPITSSVHP--GEDVNFTVALKVPEKSNKEIFTAFFNICSDDGSVFHKSL 379
Query: 61 YAILEPPKQEADKRKNS 77
A L PK + K+S
Sbjct: 380 CAFLRVPKSFSRISKSS 396
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 22 WPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHF-LSLTIYAILEPPKQEADKRKNSKTI 80
WP+ N D + +KE S K +L N + + L P QE DK
Sbjct: 276 WPITNLDSFSTISEKELLNYSKKQELTNFIENSIRKKIQTIKNLIPVLQEMDKEHARIDF 335
Query: 81 DTKNAKV 87
D ++++
Sbjct: 336 DNVDSRL 342
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 8.1
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 43 DKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEK 102
D + +L+ F+ L I+E KQE ++R + K K D E+ KAK G
Sbjct: 1035 DVDQMNSLLREAFVLLHSNNIMERLKQEFEERYKGFLVSKKAIKAND-EDLKAKFGNKSY 1093
Query: 103 TFSSFKATKAE-AIAQKSILEKR 124
F A A+ K +LE +
Sbjct: 1094 IPLEFPPLPARGALDLKKVLESK 1116
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.129 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,419,546
Number of Sequences: 5004
Number of extensions: 56545
Number of successful extensions: 153
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 145
Number of HSP's gapped (non-prelim): 14
length of query: 318
length of database: 2,362,478
effective HSP length: 73
effective length of query: 245
effective length of database: 1,997,186
effective search space: 489310570
effective search space used: 489310570
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)
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