Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000384-TA|BGIBMGA000384-PA|IPR008973|C2
calcium/lipid-binding region, CaLB
(318 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0108 - 20912236-20912364,20912470-20912601,20912718-209130... 33 0.30
08_02_1199 - 25209454-25210896,25211005-25211519,25211751-252119... 31 1.2
04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617... 31 1.2
12_01_0549 + 4396159-4397327,4397341-4398353,4398609-4398676,439... 31 1.6
11_06_0710 - 26492093-26493460 31 1.6
03_05_0541 + 25381403-25382077,25382555-25383904,25386267-253864... 31 1.6
06_02_0280 - 13708651-13708839,13708895-13709164,13709889-137104... 30 2.1
01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022... 30 2.1
05_05_0207 + 23272777-23272977,23273831-23275330 30 2.8
01_01_0186 + 1598046-1598234,1599215-1599277,1599359-1599448,159... 30 2.8
03_02_0152 - 5951201-5951616,5952228-5952602,5955534-5955948 29 3.7
02_05_0098 - 25807993-25808193,25808629-25808710,25808891-258089... 29 3.7
03_05_0226 - 22115285-22115404,22115477-22116661,22117037-221178... 29 4.9
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 29 4.9
01_06_1148 - 34895562-34895690,34896339-34896464,34896579-348969... 29 6.5
10_08_0418 - 17779499-17780952,17781177-17782017 28 8.6
01_04_0008 + 15041682-15041909,15042035-15042319,15042406-150427... 28 8.6
>09_06_0108 -
20912236-20912364,20912470-20912601,20912718-20913071,
20913161-20913407,20913489-20913565,20913971-20914045,
20914118-20914219,20914329-20914447,20914861-20914984,
20915081-20915131,20915247-20915345,20915839-20915949
Length = 539
Score = 33.1 bits (72), Expect = 0.30
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 11 SKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKI-DLQNLVSGHFLSLTIYAILEPPKQ 69
SK T + N P WNEDFKF + E + + D + + + + + E P
Sbjct: 296 SKKTTVKRSNLNPEWNEDFKFVVTDPETQALEINVFDWEQVGKHEKMGMNNILLKELP-- 353
Query: 70 EADKRKNSKTIDTKNAKVGDQEEPKAKTGF-LEKTFSSFKA--TKAEAIAQKSILEK 123
AD+ K K D + K++ LE T+ FK + E I ++EK
Sbjct: 354 -ADETKVMTVNLLKTMDPNDVQNEKSRGQLTLEVTYKPFKEEDMEKEGIDNADVVEK 409
>08_02_1199 -
25209454-25210896,25211005-25211519,25211751-25211991,
25215330-25215625,25216320-25216464
Length = 879
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 87 VGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRTVGAATWNFDSKLFQNDLKNG 146
VGD+ P + F KT+ + +K+ L+++R G D +++ D+ N
Sbjct: 132 VGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYND 191
Query: 147 LIGTPD 152
L G PD
Sbjct: 192 L-GNPD 196
>04_04_1357 +
32860677-32860781,32861484-32861588,32861678-32861728,
32861829-32861949,32862495-32862616,32863032-32863133,
32863226-32863300,32863391-32863470,32863601-32863751,
32863850-32864080,32864221-32864517,32864638-32864751,
32864857-32865030
Length = 575
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 1 ILQVKVFPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKI 45
I+ V+ P + K T+ + P+WNE F+F ++ + + + KI
Sbjct: 288 IVYVRPLPDKMKRSKTINNDLNPIWNEHFEFIVEDADTQTVTVKI 332
>12_01_0549 +
4396159-4397327,4397341-4398353,4398609-4398676,
4399229-4399291
Length = 770
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 7 FPGESKYETTLQENSWPVWNEDFKFQLKQKE 37
F +SK TT++EN VWNE F F ++Q+E
Sbjct: 32 FNSQSK-STTIKENV-AVWNERFSFDMRQRE 60
>11_06_0710 - 26492093-26493460
Length = 455
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 73 KRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSS----FKATKAEAIAQKSILEKRRTVG 128
K+K K K++ D E+PK K+ K+ SS K +K+E A E+ G
Sbjct: 207 KKKKKKKSKGKSSDEEDDEKPKKKSKSKSKSSSSDEEDEKKSKSEGQAAAKPKEEDEEGG 266
Query: 129 AATWNFDSKLFQNDLKNGLIGTPD 152
+A+ + + +N+ +G + PD
Sbjct: 267 SASASASTSAPKNEHHSGTMSLPD 290
>03_05_0541 +
25381403-25382077,25382555-25383904,25386267-25386402,
25386642-25387126
Length = 881
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 205 SVHTMQEHEKYKAPLYLKATIL--EANKAECFWKSDRFVPTISARWDPKSATVRLSVFKA 262
SV+ ++H P+YL+ T E++K EC +S F ISA+ DP+S + ++
Sbjct: 261 SVYNCRQHW---VPVYLRDTFFGDESSKEECASRSSFFDGYISAKTDPQSF---IQQYEK 314
Query: 263 SLD-QVSIYISLGCKTKMAKKEILGKATIHAQSAYSETWTQCLK 305
+LD + +TK + EI + I Q A T + LK
Sbjct: 315 ALDCCYEKEVKEEFETKYSLPEIKTSSPIEKQGADLYTRSMFLK 358
>06_02_0280 -
13708651-13708839,13708895-13709164,13709889-13710476,
13710511-13710686,13710897-13711029,13711193-13711462,
13711521-13711889
Length = 664
Score = 30.3 bits (65), Expect = 2.1
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Query: 74 RKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRTVGAATWN 133
R T+D + P KT L SSF+ T+ E I++ +
Sbjct: 30 RATINTLDRCSTTFRSMFFPMGKTNTLHGRISSFQQTRNEPISEAWERLQEYVAACPHHG 89
Query: 134 FDSKLFQNDLKNGLIGTPDIWRPINAIASGITASEKRGENTKGQLEV 180
D L + NGL TP ++A A G S+ RG +T + E+
Sbjct: 90 MDDWLNLQNCYNGL--TPMSRDHLDATAGGAFFSKTRGMHTVKETEM 134
>01_06_1149 -
34901338-34901466,34901707-34901838,34901940-34902290,
34902301-34902619,34902756-34902784,34903641-34903715,
34903799-34903900,34904002-34904120,34904752-34904875,
34904976-34905026,34905143-34905241,34905751-34905861
Length = 546
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 11 SKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKI 45
SK T + N P WNEDFKF + E ++ K+
Sbjct: 280 SKKTTVKRGNLNPEWNEDFKFVVTDPETQELEIKV 314
>05_05_0207 + 23272777-23272977,23273831-23275330
Length = 566
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 164 ITASEKRGENTKGQLEVTLLYTA-SEDGLND---VVQLTVNRLRCSVHTMQEHEKYKAPL 219
+ A+++ +N K QLE +A S G +D V L +CS HT Q E K
Sbjct: 99 LQATKQVADNLKLQLEKAASESAASARGHSDAGKVYPLPDTERKCSYHTGQPVESAKGNQ 158
Query: 220 YLKATILEANKAECFWKSD 238
T+++ N+A+ F D
Sbjct: 159 SALTTLIKLNQAKAFLNMD 177
>01_01_0186 +
1598046-1598234,1599215-1599277,1599359-1599448,
1599968-1600093,1600583-1600726,1600845-1601255,
1601283-1601364,1601403-1601491,1602250-1602471,
1602552-1602827,1603116-1603253,1603772-1604077,
1604203-1604421
Length = 784
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 4 VKVFPGESKYET-TLQENSWPVWNEDFKF 31
VKV G++ Y+T TL + PVWN+ F+F
Sbjct: 466 VKVQYGKALYKTKTLSHTTRPVWNDKFEF 494
>03_02_0152 - 5951201-5951616,5952228-5952602,5955534-5955948
Length = 401
Score = 29.5 bits (63), Expect = 3.7
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 21/202 (10%)
Query: 14 ETTLQENSWPVWNEDFKFQLKQKEAKKSSD----KIDLQNLVSGHFLSLTIYAILEPPKQ 69
+T ++ +S P ED + K+ ++ K + +I+ +N ++ + + ILE
Sbjct: 143 DTLMRTSSLPAGIEDEWRKRKEAQSLKRLEVKRKRIERRNSLTSNISKEAVGQILEEMNA 202
Query: 70 EADKRKNSKTIDTKNAKVG----DQEEPKAKTGF--LEKTFSSFKATKAEAIAQKSILEK 123
A+K ++ + T N K G + TG + + + + I K I
Sbjct: 203 GAEKVESCDDVATGNKKTGGNVNHSSDRNRCTGLPPVHRATYTQQRGSLSGIPTKHIPAM 262
Query: 124 RRTVGAATWNFDSKLFQNDLKNG-LIGTPDIWRPINAIASGITASEKRGENTKGQLEVTL 182
+ + A N S ++ +NG I TP P +A+A A RGE QL T
Sbjct: 263 KGSADAEEHNVPSAATEH--RNGAAIATP----PFSALAVRAVALASRGE----QLRATG 312
Query: 183 LYTASEDGLNDVVQLTVNRLRC 204
A + DV ++ + + C
Sbjct: 313 RVAARAKSMGDVERIMMQEMPC 334
>02_05_0098 -
25807993-25808193,25808629-25808710,25808891-25808978,
25809062-25809133,25809388-25809556
Length = 203
Score = 29.5 bits (63), Expect = 3.7
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 11 SKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQE 70
+K ET +E+ W E+ K + + + +KK D I +N I L+ ++E
Sbjct: 85 AKVETDKRESLIKAWEENEKAKAENRASKKLLDIISWENTKKA-----VIKTQLKKKEEE 139
Query: 71 ADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQK 118
+++K KN + +E + K + + KAE IA K
Sbjct: 140 LERKKAEYAEKAKNKEAIVHKEAEEKRAMVMARRGE-EVIKAEEIAAK 186
>03_05_0226 -
22115285-22115404,22115477-22116661,22117037-22117861,
22118029-22118106,22118370-22118420,22118510-22118581,
22118666-22118667,22119453-22119557,22119668-22119749,
22120178-22120227,22120514-22120567,22121084-22121164,
22121567-22121656,22121884-22121964,22122304-22122544
Length = 1038
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 65 EPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKR 124
+PPK ++ + NS+ I + ++G ++P+ K K S K T + Q L+K+
Sbjct: 8 DPPKHQSKIKMNSEEIKKRKIRLGKDQDPEKKE-MSGKNIKSIKETGTK--GQSKELQKK 64
Query: 125 RT 126
+
Sbjct: 65 ES 66
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 6 VFPGESKYETTLQENSWPVWNEDFKFQLKQK--EAKKSSDKIDLQNLVSGHFLSLTIYAI 63
VF GE + +++N P W ++F+F ++ K + I + H Y +
Sbjct: 531 VFRGEERKTKHIKKNRDPRWEQEFQFVCEEPPINDKMQIEVISRPPSIGIHSKENLGYVV 590
Query: 64 LEPPKQEADKRKNSK--TIDTKNAKV 87
+ +KR N K ID+KN ++
Sbjct: 591 ISLADVINNKRINEKYHLIDSKNGRI 616
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 11 SKYETTLQENSWPVWNEDFKFQLKQKEAK 39
SK + + N P WNEDFK +K E++
Sbjct: 383 SKKTSVKRSNLNPEWNEDFKLVVKDPESQ 411
>01_06_1148 -
34895562-34895690,34896339-34896464,34896579-34896906,
34897127-34897216,34897284-34897360,34897519-34897593,
34897862-34897980,34899240-34899363,34899427-34899477,
34899590-34899688,34900104-34900214
Length = 442
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 7 FPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNL 50
F G K ++EN P W E+F+F+ ++ A +DK+ ++ L
Sbjct: 350 FKGVEKKTKVVKENRNPRWKEEFEFECEETPA---NDKLHVEVL 390
>10_08_0418 - 17779499-17780952,17781177-17782017
Length = 764
Score = 28.3 bits (60), Expect = 8.6
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 132 WNFDSKLFQNDLKNGLIGTPDIWRP 156
WNF+++ ++ + L+G ++W+P
Sbjct: 515 WNFETRAYELRCRTQLVGGHEVWKP 539
>01_04_0008 +
15041682-15041909,15042035-15042319,15042406-15042723,
15044087-15044128,15045111-15045391,15045808-15045883,
15046196-15046296,15047971-15048088,15048872-15049186
Length = 587
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/86 (22%), Positives = 38/86 (44%)
Query: 66 PPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRR 125
PP +E D + + A + E +T +++ + A +A A Q ++ ++RR
Sbjct: 428 PPSKEMDAKMRDEEARRLRAAAKAKGEGVKRTRTRDRSQRAGPAPEANAELQANLDQRRR 487
Query: 126 TVGAATWNFDSKLFQNDLKNGLIGTP 151
+ A S+ F ++G +G P
Sbjct: 488 MITHANAKSKSEKFPPPHQDGAMGNP 513
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.129 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,426,055
Number of Sequences: 37544
Number of extensions: 308578
Number of successful extensions: 612
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 601
Number of HSP's gapped (non-prelim): 22
length of query: 318
length of database: 14,793,348
effective HSP length: 82
effective length of query: 236
effective length of database: 11,714,740
effective search space: 2764678640
effective search space used: 2764678640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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