Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000383-TA|BGIBMGA000383-PA|IPR002085|Alcohol
dehydrogenase superfamily, zinc-containing
(370 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 30 0.46
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 27 3.2
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 27 5.6
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 27 5.6
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 26 7.4
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 26 7.4
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 26 9.8
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 26 9.8
SPAC9E9.10c |cbh1|cbh|centromere binding protein |Schizosaccharo... 26 9.8
SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor Vp... 26 9.8
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 30.3 bits (65), Expect = 0.46
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 302 SLYLCDYLFPGEAPAEALLSVRELLDLKITETDV 335
S LC YLFP E+L+++ L L++++ D+
Sbjct: 408 STILCPYLFPTNVRMESLINLELFLYLRLSQNDI 441
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 260 DMVRSLASRFTMHCDALIDDNLLPE-EKICFNEPP 293
+M+++L F + ++ID ++PE EK N+PP
Sbjct: 436 EMIQNLPPLFVFNARSVIDKEVVPEQEKSAENQPP 470
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 26.6 bits (56), Expect = 5.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 179 FSPKALSWQRLDCYYEFDEIYPVIVK-NSGVSVKNQFQENTLPETVEYLE 227
F+ K LS + D ++ F I+P +VK + +F E T PE + YL+
Sbjct: 167 FTMKELSVELADEHFTFISIHPGVVKTDMNADAIKKFTE-TSPEMLTYLK 215
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 26.6 bits (56), Expect = 5.6
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 25 AIGLILGQMTDARENVIHLARTPEEKGSEIGIESNYGLDKSEIAKNLSSVSEAWIADHAR 84
+I LI+ ++N + + + +K SE+ + + D S + +NLS+ S A D R
Sbjct: 592 SIDLIIALCKSLQKNEVLQSLSLVKKLSELPFDPSTSRDASVLLRNLSAKSSALEKDTRR 651
Query: 85 HVTRMLPG 92
V L G
Sbjct: 652 VVLHALLG 659
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 26.2 bits (55), Expect = 7.4
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 202 IVKNSGVSVKNQFQENTLPETV-----EYLECEGSIHFSGVVSSSVFIYPKATVKEAI 254
+ KNS + ++ + T PE + + + + ++G + SVF +PK ++EAI
Sbjct: 184 VKKNSEIKFVSEERGGTKPERLLDPLWPTPDSQSMLEYAGSIEPSVFWFPKKHLEEAI 241
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 26.2 bits (55), Expect = 7.4
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 208 VSVKNQFQENTLPETVEYLECEGSIHFSGVVSSSVFIYPKATVKEAIAAVKQDMVRSLAS 267
++ +F+ + + VE LE G + + +F+Y V++ V + +V+ +
Sbjct: 732 ITETKEFKLDMITNIVENLEYNGGLPVRLMTLGQLFLYTLEEVEKVADQVTEFLVKKVIQ 791
Query: 268 RFTMHCDALIDD 279
RF D +D
Sbjct: 792 RFPEKYDDTHND 803
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 60 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDE 105
Y + K EI + +SEA + R + +PGG+ + DE
Sbjct: 82 YVIPKHEIRNRIRLLSEASLISCLRWLLHRIPGGVITWSTYKLFDE 127
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 36 ARENVIHLARTPEEKGSEIGIESNYGLDKSEIAKNLSS 73
A EN++ TP++ ++G +++ +DK + K SS
Sbjct: 631 APENILLDGLTPKQSSEDVGDATSFHMDKLDKEKEKSS 668
>SPAC9E9.10c |cbh1|cbh|centromere binding protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 514
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/35 (28%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 8 PEHCLQYLEQYASKEIFAIG--LILGQMTDARENV 40
P H +++ YA K+IF +G + ++T ++N+
Sbjct: 161 PVHIQEFIRPYAQKDIFCVGGTSLFWKLTPNKQNL 195
>SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor
Vps902 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 310 FPGEAPAEALLSVRELLDLKITETDVI 336
F G+ P E L+V + DLKI E +++
Sbjct: 358 FVGDPPLERFLTVSDASDLKIGEIELL 384
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,775,370
Number of Sequences: 5004
Number of extensions: 76402
Number of successful extensions: 191
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 185
Number of HSP's gapped (non-prelim): 10
length of query: 370
length of database: 2,362,478
effective HSP length: 74
effective length of query: 296
effective length of database: 1,992,182
effective search space: 589685872
effective search space used: 589685872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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