GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000383-TA|BGIBMGA000383-PA|IPR002085|Alcohol
dehydrogenase superfamily, zinc-containing
         (370 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione S-tran...    28   0.36 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.5  
DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    24   5.8  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           24   5.8  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           24   5.8  

>AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione
           S-transferase E5 protein.
          Length = 230

 Score = 28.3 bits (60), Expect = 0.36
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 232 IHF-SGVVSSSVFIYPKATVKEAIAAVKQDMVRSLASRFTMHCDALIDD 279
           +HF SGV+ S +  Y +  + E  A V QD +  +   + +  DAL++D
Sbjct: 104 LHFDSGVLFSRLRFYFEPILYEGSAEVPQDKIDYMKKGYELLNDALVED 152


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 334 DVICDVETPAGAQIFVFLEIILL 356
           D + DV+ P GA+I  F + +LL
Sbjct: 662 DSVLDVQLPEGAEIIAFADDLLL 684


>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 27  GLILGQMTDARENVIHLARTPEEKGSEIGIESNYGLDK 64
           GLI  +  D  E  + L+       ++ G+ + Y LDK
Sbjct: 191 GLIYQRCNDRLETAVQLSWASGSNATKFGMGAKYDLDK 228


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 27  GLILGQMTDARENVIHLARTPEEKGSEIGIESNYGLDK 64
           GLI  +  D  E  + L+       ++ G+ + Y LDK
Sbjct: 191 GLIYQRCNDRLETAVQLSWASGSNATKFGMGAKYDLDK 228


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 27  GLILGQMTDARENVIHLARTPEEKGSEIGIESNYGLDK 64
           GLI  +  D  E  + L+       ++ G+ + Y LDK
Sbjct: 191 GLIYQRCNDRLETAVQLSWASGSNATKFGMGAKYDLDK 228


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,195
Number of Sequences: 2123
Number of extensions: 14903
Number of successful extensions: 47
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42
Number of HSP's gapped (non-prelim): 5
length of query: 370
length of database: 516,269
effective HSP length: 65
effective length of query: 305
effective length of database: 378,274
effective search space: 115373570
effective search space used: 115373570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)