Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000383-TA|BGIBMGA000383-PA|IPR002085|Alcohol
dehydrogenase superfamily, zinc-containing
(370 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ529299-1|ABF71985.1| 431|Homo sapiens TTG1A protein. 82 3e-15
DQ323046-1|ABC50092.1| 454|Homo sapiens TTG1 protein. 81 6e-15
BC003397-1|AAH03397.2| 454|Homo sapiens chromosome 1 open readi... 81 6e-15
AY854248-1|AAW30011.1| 454|Homo sapiens odorant response abnorm... 81 6e-15
AL596220-3|CAI13121.1| 454|Homo sapiens chromosome 1 open readi... 81 6e-15
AK000512-1|BAA91218.1| 335|Homo sapiens protein ( Homo sapiens ... 81 6e-15
AK026086-1|BAB15356.1| 373|Homo sapiens protein ( Homo sapiens ... 60 1e-08
BC017282-1|AAH17282.1| 860|Homo sapiens THRAP5 protein protein. 34 0.70
BC011841-1|AAH11841.1| 841|Homo sapiens THRAP5 protein protein. 34 0.70
BC007853-1|AAH07853.2| 504|Homo sapiens THRAP5 protein protein. 34 0.70
BC004554-1|AAH04554.1| 841|Homo sapiens THRAP5 protein protein. 34 0.70
AF121228-1|AAD30032.1| 877|Homo sapiens thyroid hormone recepto... 34 0.70
AF106934-1|AAD31087.1| 873|Homo sapiens vitamin D receptor-inte... 34 0.70
Z72499-1|CAA96580.1| 1102|Homo sapiens herpesvirus associated ub... 31 4.9
AY376241-1|AAQ82908.1| 1112|Homo sapiens ubiquitin-specific prot... 31 4.9
>DQ529299-1|ABF71985.1| 431|Homo sapiens TTG1A protein.
Length = 431
Score = 82.2 bits (194), Expect = 3e-15
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 22/222 (9%)
Query: 1 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 59
M RT E QYL + + F GL++GQ + ++ VI RTP KG + N
Sbjct: 1 MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPP-KGEQ---SEN 56
Query: 60 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 119
K++ L ++ E W +HA V+RMLPGG+ V G+F+ + ++ D + LR
Sbjct: 57 LKHPKAK----LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDSQ--NALRR 110
Query: 120 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKSLEVGGLNKNTTLKPVEW 177
+ + K SIN N +ER+ LH+ STK + C++ ++ + ++ +P +W
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTYDIH--DPESSARPADW 166
Query: 178 KF-SPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKNQFQENT 218
K+ S + SW L+C + P+ S SV ++NT
Sbjct: 167 KYQSGLSSSWLSLECTVHINIHIPL----SATSVSYTLEKNT 204
Score = 55.2 bits (127), Expect = 3e-07
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 228 CEGSIHFSGVVSSSVFIYP-KATVKEAIAAVKQDMVRSLASRFTMHCDALIDD---NLLP 283
C GS++ G V +I+ K VK+A+ AVK+D++ ++A R C+ L +D N +P
Sbjct: 252 CSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADR----CEMLFEDLLLNEIP 307
Query: 284 EEKIC---FNEPPRRVLVPV--GSLYLCDYLFPGEAPAEALLSVRELLDLKITETDVICD 338
E+K F+ P RV VP+ ++ L DY F E+ E E+LD I D+
Sbjct: 308 EKKDSEKEFHVLPYRVFVPLPGSTVMLRDYKFDDESAEEIRDHFMEMLDHTIQIEDLEIA 367
Query: 339 VET 341
ET
Sbjct: 368 EET 370
>DQ323046-1|ABC50092.1| 454|Homo sapiens TTG1 protein.
Length = 454
Score = 81.0 bits (191), Expect = 6e-15
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 1 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 59
M RT E QYL + + F GL++GQ + ++ VI RTP ++ E +
Sbjct: 1 MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54
Query: 60 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 119
L K AK L ++ E W +HA V+RMLPGG+ V G+F+ + ++ D + LR
Sbjct: 55 ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110
Query: 120 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKSLEVGGLNKNTTLKPVEW 177
+ + K SIN N +ER+ LH+ STK + C++ ++ + ++ +P +W
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTYDIH--DPKSSARPADW 166
Query: 178 KF-SPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKNQFQENT 218
K+ S + SW L+C + P+ S SV ++NT
Sbjct: 167 KYQSGLSSSWLSLECTVHINIHIPL----SATSVSYTLEKNT 204
Score = 60.1 bits (139), Expect = 1e-08
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 228 CEGSIHFSGVVSSSVFIYP-KATVKEAIAAVKQDMVRSLASRFTMHCDALIDD---NLLP 283
C GS++ G V +I+ K VK+A+ AVK+D++ ++A R C+ L +D N +P
Sbjct: 275 CSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADR----CEMLFEDLLLNEIP 330
Query: 284 EEKIC---FNEPPRRVLVPV--GSLYLCDYLFPGEAPAEALLSVRELLDLKITETDVICD 338
E+K F+ P RV VP+ ++ LCDY F E+ E E+LD I D+
Sbjct: 331 EKKDSEKEFHVLPYRVFVPLPGSTVMLCDYKFDDESAEEIRDHFMEMLDHTIQIEDLEIA 390
Query: 339 VET 341
ET
Sbjct: 391 EET 393
>BC003397-1|AAH03397.2| 454|Homo sapiens chromosome 1 open reading
frame 27 protein.
Length = 454
Score = 81.0 bits (191), Expect = 6e-15
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 1 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 59
M RT E QYL + + F GL++GQ + ++ VI RTP ++ E +
Sbjct: 1 MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54
Query: 60 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 119
L K AK L ++ E W +HA V+RMLPGG+ V G+F+ + ++ D + LR
Sbjct: 55 ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110
Query: 120 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKSLEVGGLNKNTTLKPVEW 177
+ + K SIN N +ER+ LH+ STK + C++ ++ + ++ +P +W
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTYDIH--DPKSSARPADW 166
Query: 178 KF-SPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKNQFQENT 218
K+ S + SW L+C + P+ S SV ++NT
Sbjct: 167 KYQSGLSSSWLSLECTVHINIHIPL----SATSVSYTLEKNT 204
Score = 60.1 bits (139), Expect = 1e-08
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 228 CEGSIHFSGVVSSSVFIYP-KATVKEAIAAVKQDMVRSLASRFTMHCDALIDD---NLLP 283
C GS++ G V +I+ K VK+A+ AVK+D++ ++A R C+ L +D N +P
Sbjct: 275 CSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADR----CEMLFEDLLLNEIP 330
Query: 284 EEKIC---FNEPPRRVLVPV--GSLYLCDYLFPGEAPAEALLSVRELLDLKITETDVICD 338
E+K F+ P RV VP+ ++ LCDY F E+ E E+LD I D+
Sbjct: 331 EKKDSEKEFHVLPYRVFVPLPGSTVMLCDYKFDDESAEEIRDHFMEMLDHTIQIEDLEIA 390
Query: 339 VET 341
ET
Sbjct: 391 EET 393
>AY854248-1|AAW30011.1| 454|Homo sapiens odorant response abnormal
4 protein protein.
Length = 454
Score = 81.0 bits (191), Expect = 6e-15
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 1 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 59
M RT E QYL + + F GL++GQ + ++ VI RTP ++ E +
Sbjct: 1 MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54
Query: 60 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 119
L K AK L ++ E W +HA V+RMLPGG+ V G+F+ + ++ D + LR
Sbjct: 55 ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110
Query: 120 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKSLEVGGLNKNTTLKPVEW 177
+ + K SIN N +ER+ LH+ STK + C++ ++ + ++ +P +W
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTYDIH--DPKSSARPADW 166
Query: 178 KF-SPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKNQFQENT 218
K+ S + SW L+C + P+ S SV ++NT
Sbjct: 167 KYQSGLSSSWLSLECTVHINIHIPL----SATSVSYTLEKNT 204
Score = 60.1 bits (139), Expect = 1e-08
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 228 CEGSIHFSGVVSSSVFIYP-KATVKEAIAAVKQDMVRSLASRFTMHCDALIDD---NLLP 283
C GS++ G V +I+ K VK+A+ AVK+D++ ++A R C+ L +D N +P
Sbjct: 275 CSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADR----CEMLFEDLLLNEIP 330
Query: 284 EEKIC---FNEPPRRVLVPV--GSLYLCDYLFPGEAPAEALLSVRELLDLKITETDVICD 338
E+K F+ P RV VP+ ++ LCDY F E+ E E+LD I D+
Sbjct: 331 EKKDSEKEFHVLPYRVFVPLPGSTVMLCDYKFDDESAEEIRDHFMEMLDHTIQIEDLEIA 390
Query: 339 VET 341
ET
Sbjct: 391 EET 393
>AL596220-3|CAI13121.1| 454|Homo sapiens chromosome 1 open reading
frame 27 protein.
Length = 454
Score = 81.0 bits (191), Expect = 6e-15
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 1 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 59
M RT E QYL + + F GL++GQ + ++ VI RTP ++ E +
Sbjct: 1 MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54
Query: 60 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 119
L K AK L ++ E W +HA V+RMLPGG+ V G+F+ + ++ D + LR
Sbjct: 55 ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110
Query: 120 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKSLEVGGLNKNTTLKPVEW 177
+ + K SIN N +ER+ LH+ STK + C++ ++ + ++ +P +W
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTYDIH--DPKSSARPADW 166
Query: 178 KF-SPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKNQFQENT 218
K+ S + SW L+C + P+ S SV ++NT
Sbjct: 167 KYQSGLSSSWLSLECTVHINIHIPL----SATSVSYTLEKNT 204
Score = 60.1 bits (139), Expect = 1e-08
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 228 CEGSIHFSGVVSSSVFIYP-KATVKEAIAAVKQDMVRSLASRFTMHCDALIDD---NLLP 283
C GS++ G V +I+ K VK+A+ AVK+D++ ++A R C+ L +D N +P
Sbjct: 275 CSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADR----CEMLFEDLLLNEIP 330
Query: 284 EEKIC---FNEPPRRVLVPV--GSLYLCDYLFPGEAPAEALLSVRELLDLKITETDVICD 338
E+K F+ P RV VP+ ++ LCDY F E+ E E+LD I D+
Sbjct: 331 EKKDSEKEFHVLPYRVFVPLPGSTVMLCDYKFDDESAEEIRDHFMEMLDHTIQIEDLEIA 390
Query: 339 VET 341
ET
Sbjct: 391 EET 393
>AK000512-1|BAA91218.1| 335|Homo sapiens protein ( Homo sapiens
cDNA FLJ20505 fis, clone KAT09459. ).
Length = 335
Score = 81.0 bits (191), Expect = 6e-15
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 1 MPRTVYSPEHCLQYLEQYASK-EIFAIGLILGQMTDARENVIHLARTPEEKGSEIGIESN 59
M RT E QYL + + F GL++GQ + ++ VI RTP ++ E +
Sbjct: 1 MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKE------EQS 54
Query: 60 YGLDKSEIAKNLSSVSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRS 119
L K AK L ++ E W +HA V+RMLPGG+ V G+F+ + ++ D + LR
Sbjct: 55 ENL-KHPKAK-LDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQ--NALRR 110
Query: 120 TLNHIYKGLSINEYMFGNCPYS--NERLILHMSTSTKVLTCKSLEVGGLNKNTTLKPVEW 177
+ + K SIN N +ER+ LH+ STK + C++ ++ + ++ +P +W
Sbjct: 111 LMFAVEK--SINRKRLWNFTEEEVSERVTLHICASTKKIFCRTYDIH--DPKSSARPADW 166
Query: 178 KF-SPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKNQFQENT 218
K+ S + SW L+C + P+ S SV ++NT
Sbjct: 167 KYQSGLSSSWLSLECTVHINIHIPL----SATSVSYTLEKNT 204
Score = 41.9 bits (94), Expect = 0.003
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 228 CEGSIHFSGVVSSSVFIYP-KATVKEAIAAVKQDMVRSLASRFTMHCDALIDDNLLPE 284
C GS++ G V +I+ K VK+A+ AVK+D++ ++A R C+ L +D LL E
Sbjct: 275 CSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADR----CEMLFEDLLLNE 328
>AK026086-1|BAB15356.1| 373|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22433 fis, clone HRC09172. ).
Length = 373
Score = 60.1 bits (139), Expect = 1e-08
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 228 CEGSIHFSGVVSSSVFIYP-KATVKEAIAAVKQDMVRSLASRFTMHCDALIDD---NLLP 283
C GS++ G V +I+ K VK+A+ AVK+D++ ++A R C+ L +D N +P
Sbjct: 194 CSGSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADR----CEMLFEDLLLNEIP 249
Query: 284 EEKIC---FNEPPRRVLVPV--GSLYLCDYLFPGEAPAEALLSVRELLDLKITETDVICD 338
E+K F+ P RV VP+ ++ LCDY F E+ E E+LD I D+
Sbjct: 250 EKKDSEKEFHVLPYRVFVPLPGSTVMLCDYKFDDESAEEIRDHFMEMLDHTIQIEDLEIA 309
Query: 339 VET 341
ET
Sbjct: 310 EET 312
Score = 51.2 bits (117), Expect = 6e-06
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 89 MLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYKGLSINEYMFGNCPYS--NERLI 146
MLPGG+ V G+F+ + ++ D + LR + + K SIN N +ER+
Sbjct: 1 MLPGGLLVLGVFIITTLELANDFQ--NALRRLMFAVEK--SINRKRLWNFTEEEVSERVT 56
Query: 147 LHMSTSTKVLTCKSLEVGGLNKNTTLKPVEWKF-SPKALSWQRLDCYYEFDEIYPVIVKN 205
LH+ STK + C++ ++ + ++ +P +WK+ S + SW L+C + P+
Sbjct: 57 LHICASTKKIFCRTYDIH--DPKSSARPADWKYQSGLSSSWLSLECTVHINIHIPL---- 110
Query: 206 SGVSVKNQFQENT 218
S SV ++NT
Sbjct: 111 SATSVSYTLEKNT 123
>BC017282-1|AAH17282.1| 860|Homo sapiens THRAP5 protein protein.
Length = 860
Score = 34.3 bits (75), Expect = 0.70
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 111 PNCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLEVGGLNKNT 170
P+ F + + LN K +I F S + L+ S ++ ++ C SL GL N
Sbjct: 261 PSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNN 320
Query: 171 T---LKPVEWKFSPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKN 212
+ PV P L W+ L + D + V + +S+ N
Sbjct: 321 IFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTN 365
>BC011841-1|AAH11841.1| 841|Homo sapiens THRAP5 protein protein.
Length = 841
Score = 34.3 bits (75), Expect = 0.70
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 111 PNCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLEVGGLNKNT 170
P+ F + + LN K +I F S + L+ S ++ ++ C SL GL N
Sbjct: 261 PSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNN 320
Query: 171 T---LKPVEWKFSPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKN 212
+ PV P L W+ L + D + V + +S+ N
Sbjct: 321 IFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTN 365
>BC007853-1|AAH07853.2| 504|Homo sapiens THRAP5 protein protein.
Length = 504
Score = 34.3 bits (75), Expect = 0.70
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 111 PNCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLEVGGLNKNT 170
P+ F + + LN K +I F S + L+ S ++ ++ C SL GL N
Sbjct: 14 PSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNN 73
Query: 171 T---LKPVEWKFSPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKN 212
+ PV P L W+ L + D + V + +S+ N
Sbjct: 74 IFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTN 118
>BC004554-1|AAH04554.1| 841|Homo sapiens THRAP5 protein protein.
Length = 841
Score = 34.3 bits (75), Expect = 0.70
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 111 PNCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLEVGGLNKNT 170
P+ F + + LN K +I F S + L+ S ++ ++ C SL GL N
Sbjct: 261 PSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNN 320
Query: 171 T---LKPVEWKFSPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKN 212
+ PV P L W+ L + D + V + +S+ N
Sbjct: 321 IFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTN 365
>AF121228-1|AAD30032.1| 877|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP95
protein.
Length = 877
Score = 34.3 bits (75), Expect = 0.70
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 111 PNCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLEVGGLNKNT 170
P+ F + + LN K +I F S + L+ S ++ ++ C SL GL N
Sbjct: 261 PSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNN 320
Query: 171 T---LKPVEWKFSPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKN 212
+ PV P L W+ L + D + V + +S+ N
Sbjct: 321 IFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTN 365
>AF106934-1|AAD31087.1| 873|Homo sapiens vitamin D
receptor-interacting protein protein.
Length = 873
Score = 34.3 bits (75), Expect = 0.70
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 111 PNCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLEVGGLNKNT 170
P+ F + + LN K +I F S + L+ S ++ ++ C SL GL N
Sbjct: 261 PSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNN 320
Query: 171 T---LKPVEWKFSPKALSWQRLDCYYEFDEIYPVIVKNSGVSVKN 212
+ PV P L W+ L + D + V + +S+ N
Sbjct: 321 IFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTN 365
>Z72499-1|CAA96580.1| 1102|Homo sapiens herpesvirus associated
ubiquitin-specific protease (HAUSP) protein.
Length = 1102
Score = 31.5 bits (68), Expect = 4.9
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 173 KPVEWKFSPKALSWQRLDCYYEFD--EIYPVIVKNSGVSVKNQFQENTLP-----ETVEY 225
KPV K K+ W+ LD + + D E+ V++ N +K E T+P + V Y
Sbjct: 272 KPVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSY 331
Query: 226 LECE 229
++C+
Sbjct: 332 IQCK 335
>AY376241-1|AAQ82908.1| 1112|Homo sapiens ubiquitin-specific
protease 7 isoform protein.
Length = 1112
Score = 31.5 bits (68), Expect = 4.9
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 173 KPVEWKFSPKALSWQRLDCYYEFD--EIYPVIVKNSGVSVKNQFQENTLP-----ETVEY 225
KPV K K+ W+ LD + + D E+ V++ N +K E T+P + V Y
Sbjct: 282 KPVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSY 341
Query: 226 LECE 229
++C+
Sbjct: 342 IQCK 345
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,395,819
Number of Sequences: 224733
Number of extensions: 2285560
Number of successful extensions: 3760
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3728
Number of HSP's gapped (non-prelim): 22
length of query: 370
length of database: 73,234,838
effective HSP length: 91
effective length of query: 279
effective length of database: 52,784,135
effective search space: 14726773665
effective search space used: 14726773665
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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