Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000382-TA|BGIBMGA000382-PA|IPR007052|CS,
IPR008978|HSP20-like chaperone
(156 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0888 + 6805071-6805485,6806202-6806374,6806501-6806549,680... 184 2e-47
02_05_0720 - 31213391-31213617,31213724-31213772,31213898-312140... 78 3e-15
01_06_0190 + 27330533-27330581,27330681-27330829,27331047-273311... 31 0.42
08_01_0674 + 5835592-5835649,5835750-5835856,5835953-5836019,583... 29 1.3
02_02_0699 + 13055146-13055758,13056230-13056324 29 1.7
01_06_1579 + 38402868-38402894,38403394-38403582,38403817-384039... 29 1.7
03_02_0431 - 8384259-8384266,8384649-8384787,8385875-8386067,838... 29 2.3
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806... 29 2.3
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 28 3.0
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 28 3.0
01_01_0033 + 260562-260661,260895-260941,261582-261681,261925-26... 28 3.0
09_02_0548 - 10467342-10468810,10470309-10471632 28 3.9
01_07_0265 + 42404297-42404479,42404544-42404723,42404811-42405440 28 3.9
01_05_0006 + 17008799-17009417,17010035-17010162,17010425-170106... 28 3.9
12_02_0842 - 23588826-23589198,23589548-23590203 27 6.9
12_02_0763 + 22953749-22953884,22955036-22955199,22955695-229563... 27 6.9
05_01_0097 - 656813-657316 27 9.1
>06_01_0888 +
6805071-6805485,6806202-6806374,6806501-6806549,
6806654-6806820,6806919-6807002,6807097-6807135
Length = 308
Score = 184 bits (449), Expect = 2e-47
Identities = 86/145 (59%), Positives = 108/145 (74%)
Query: 10 IRVPLRQILRPRDLTVVINKKHLKVGIKGQPLIIDGELDADVKIEESTWVLQDGRNLLIN 69
I VP+ Q + R + I K HLKVG+KGQP IIDGEL VK+++ W ++DG++L I
Sbjct: 162 ITVPVPQGTKSRFVVCDIKKNHLKVGLKGQPPIIDGELFKPVKVDDCFWSIEDGKSLSIL 221
Query: 70 LEKVNKMNWWGRLVTTDPEISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTS 129
L K N+M WW +V DPE+ T+K+ PE SKL+DLD ETR VEKMM+DQRQK+MGLPTS
Sbjct: 222 LTKQNQMEWWKSVVKGDPEVDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKQMGLPTS 281
Query: 130 DEQKKQEVLKKFMEQHPEMDFSKCK 154
DE +KQ++LKKFM QHPEMDFS K
Sbjct: 282 DEMQKQDMLKKFMAQHPEMDFSNAK 306
>02_05_0720 -
31213391-31213617,31213724-31213772,31213898-31214076,
31215861-31216110
Length = 234
Score = 78.2 bits (184), Expect = 3e-15
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 10 IRVPLRQILRPRDLTVVINKKHLKVGIKGQPLIIDGELDADVKIEESTWVLQDGRNLLIN 69
I +P+ Q + +T I K HLKVG+KG IIDGEL VK+ + W ++DG L I
Sbjct: 109 ITIPVPQGTKSSLVTYEIMKNHLKVGLKGCSFIIDGELFEPVKVNDCLWTIEDGNTLSIL 168
Query: 70 LEKVNKMNWWGRLVTTDPEISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQKEM 124
L K N+ WW ++ DPE+ R + + +L D D E + + +++ K M
Sbjct: 169 LTKENQKEWWTSVIKGDPELDPRDM--KVPELRDCDVEAKETIVRILSHGLPKAM 221
>01_06_0190 +
27330533-27330581,27330681-27330829,27331047-27331128,
27331567-27331709,27332192-27332278
Length = 169
Score = 31.1 bits (67), Expect = 0.42
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 119 QRQKEMGLPTSDEQKKQEVLKKFMEQHPEMDFSKCKF 155
Q Q + +D+++K+ +L++F E++P DFS+ +F
Sbjct: 116 QGQGSLDPYAADQEQKRLMLQRFQEENPGFDFSQAQF 152
>08_01_0674 +
5835592-5835649,5835750-5835856,5835953-5836019,
5836244-5836481,5836570-5836720,5836829-5837173
Length = 321
Score = 29.5 bits (63), Expect = 1.3
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 42 IIDGELDADVKIEESTWVLQDGRNLLINLEKV--NKMNWWGRLVTTDPEISTRKINPEPS 99
IID +++ DV +EE+ L+ G + K+ N +N +++T + +++T +I +PS
Sbjct: 220 IIDADIEDDVDVEEACRFLKVGLLCTQDAMKLRPNMIN-IVQMLTGEKDVNTERIT-KPS 277
Query: 100 KLSDLDGETRGLVEKMMYD 118
+ DL G+ RG ++ D
Sbjct: 278 VVGDL-GDLRGSSQQRPID 295
>02_02_0699 + 13055146-13055758,13056230-13056324
Length = 235
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 89 ISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQ---KEMGLPTSDEQKKQEVLKKFMEQH 145
+ST++I P SD DG+ G EK+ +Q++ E+ LP ++++ + + +
Sbjct: 99 VSTKEITKFPEMTSDPDGKLDGKKEKLYPEQKEAIVSEISLPQILKKEETHIAVEVDDGS 158
Query: 146 PEMDFS 151
M+ S
Sbjct: 159 SNMELS 164
>01_06_1579 +
38402868-38402894,38403394-38403582,38403817-38403918,
38404005-38405963,38406050-38406105,38406332-38406368
Length = 789
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 74 NKMNWWGRLVTTDPEISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQ 121
N+ NWW + T P I S D + R L+E++ D +
Sbjct: 461 NQPNWWRQSNKTIPRIGLSSSTDSKPDFSGNDAKVRNLIEELKSDSAE 508
>03_02_0431 -
8384259-8384266,8384649-8384787,8385875-8386067,
8386180-8387702
Length = 620
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 96 PEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQEVL 138
P PS + + G RG + ++++++++ LP EQK +L
Sbjct: 96 PGPSPSASVPGSRRGFLYGFVFNRQRQDERLPRGGEQKSVVIL 138
>02_05_0276 +
27378994-27380094,27380185-27380250,27380586-27380660,
27381927-27382025,27382353-27382436,27382519-27382868,
27383190-27383406,27383579-27383658,27383760-27383850,
27386544-27386672,27388771-27388858,27389967-27390097
Length = 836
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 28 NKKHLKVGIKGQPLIIDGELDADVKIEE 55
+K+H VGIKG PL ++ +D DV + E
Sbjct: 628 SKEHCLVGIKGNPL-VNRNIDTDVIVAE 654
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 80 GRLVTTDPEISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKK 134
GR + + +S P+P++ S G T LV+K D + + + T D+QK+
Sbjct: 221 GRQLLGEMNVSKSTEQPKPTE-SISGGHTDELVQKRYQDNKPADQEIATLDKQKR 274
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 86 DPEISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQEVLKKFMEQH 145
D + ++ PEP ++L+ E VE+ DQ +KE LP +E + ++ E+
Sbjct: 133 DHAVQSKPAEPEPEPGTELEEEE---VEQ---DQEEKEAELPMPEESGDGKAPEEESEKA 186
Query: 146 PEMDFSK 152
PE++ +
Sbjct: 187 PELELDE 193
>01_01_0033 +
260562-260661,260895-260941,261582-261681,261925-262181,
262525-262640,263014-263098,264236-264415,264740-264817,
264909-264970,265138-265246,266237-266514,266591-266657,
266734-266802,266880-266981,267309-267443
Length = 594
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 92 RKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQEVLKKFMEQH 145
+K +P P + L+ ET G ++ + Q +K GL S +K + KK+ +H
Sbjct: 467 QKYSPNPV-IESLEEETEGDGKRKISYQMEKNRGLTRSRNKKLKNPRKKYRVKH 519
>09_02_0548 - 10467342-10468810,10470309-10471632
Length = 930
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 56 STWVLQDGRNLLINLEKVNKMNWWGR----LVTTDPEISTRKINP 96
S W + D R L+ L K K NW R LV +P K+ P
Sbjct: 147 SRWEIVDSRGSLLLLAKKKKSNWMRRCFPDLVVCEPVTRRHKVIP 191
>01_07_0265 + 42404297-42404479,42404544-42404723,42404811-42405440
Length = 330
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 101 LSDLDGETRGLVEKMMYDQRQKE--MGLPTSDEQKKQEVLKKFMEQHPE 147
L L GE + +E+++++ R+ E +G+ + + +E+L + E+H +
Sbjct: 62 LDRLVGEMQRQMERLVWENRELEEKLGMALKESRAMEEILDEMEEEHDD 110
>01_05_0006 +
17008799-17009417,17010035-17010162,17010425-17010650,
17010792-17010925,17010988-17011161,17011234-17012238
Length = 761
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 3 LLNLGLQIRVPLRQILRPRDLTVVINKKHLKVGIKGQPLII 43
L +Q R LR++ + T I +KHLK GI +P+++
Sbjct: 324 LAKSNVQNRKYLREVDVEHETTTFICQKHLKCGITVEPMLL 364
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 99 SKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQEVLKKFMEQHPEM 148
+K+ L E VE++ + R+K GL E K+Q++ +++ +H +
Sbjct: 263 AKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARL 312
>12_02_0763 +
22953749-22953884,22955036-22955199,22955695-22956307,
22968553-22968874,22969107-22969373,22969692-22970460
Length = 756
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 103 DLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQEVLKKFMEQHPEM 148
D+DG G+V QRQ ++ L +E+ K+E+ K F Q PE+
Sbjct: 263 DVDGYLAGMV------QRQVKLLLKGEEEEFKEELRKLFKFQTPEI 302
>05_01_0097 - 656813-657316
Length = 167
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 83 VTTDPEISTRKINPEPSKLSDLDGETRGLVEK 114
V +P+I T + + EP+ + DL G +G EK
Sbjct: 77 VKEEPDIKTEEGSSEPTTVEDLLGALKGGAEK 108
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.136 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,455,885
Number of Sequences: 37544
Number of extensions: 179464
Number of successful extensions: 457
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 447
Number of HSP's gapped (non-prelim): 18
length of query: 156
length of database: 14,793,348
effective HSP length: 76
effective length of query: 80
effective length of database: 11,940,004
effective search space: 955200320
effective search space used: 955200320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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