GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000382-TA|BGIBMGA000382-PA|IPR007052|CS,
IPR008978|HSP20-like chaperone
         (156 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.5  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   2.5  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   3.4  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   5.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   7.8  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 61  QDGRNLLINLEKVNKMNWWGRLVTTDPEISTRKINPEPSKLSDLDGETRGLVEKM 115
           QDG +LL+NL KVN      RL+ +   I T  +    S    L  E   + + +
Sbjct: 619 QDGTHLLMNLIKVNDPVVMNRLIDS-AAIDTILVTEHQSVAIQLTSEIENVPQNL 672


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 14/55 (25%), Positives = 23/55 (41%)

Query: 82  LVTTDPEISTRKINPEPSKLSDLDGETRGLVEKMMYDQRQKEMGLPTSDEQKKQE 136
           L+  D + ST  +N EPS+    D E     +     Q ++E    T    K+ +
Sbjct: 66  LIMNDADKSTLVLNDEPSQGDSKDNEIYDFEDPDYIVQEEQEPAKKTQTRGKRTQ 120


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 93  KINPEPSKLSDLDG--ETRGLVEKMMYDQRQ 121
           +I P   K SD DG  + RG++EK+ Y +R+
Sbjct: 31  QIYPRSFKDSDGDGVGDLRGIMEKVPYLRRE 61


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 126 LPTSDEQKKQEVLKKFMEQH 145
           L ++D  K++E ++KF E+H
Sbjct: 963 LQSADFAKRREAVEKFNEEH 982


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 106  GETRG--LVEKMMYDQRQKEMGLPTSDEQKKQEVLKKFMEQHPEMDFSKC 153
            GE  G  L E +  D+   E    T  + +KQ+ L +  E+   +D SKC
Sbjct: 1180 GEALGARLNEMVNNDKLTSEQMAATLSDPEKQKQLLQQDEEEDFLDESKC 1229


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.136    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,007
Number of Sequences: 2123
Number of extensions: 5968
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 5
length of query: 156
length of database: 516,269
effective HSP length: 59
effective length of query: 97
effective length of database: 391,012
effective search space: 37928164
effective search space used: 37928164
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)