Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000381-TA|BGIBMGA000381-PA|undefined
(193 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 29 0.45
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 28 1.0
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 1.0
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 1.4
SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|ch... 27 1.8
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 27 1.8
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 2.4
SPBC2G5.01 |||DUF1682 family protein|Schizosaccharomyces pombe|c... 27 2.4
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.1
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 3.1
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 26 3.1
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 26 4.2
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 26 4.2
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 26 4.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 4.2
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 26 4.2
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 25 7.3
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 25 7.3
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 25 7.3
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 25 7.3
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 25 7.3
SPBC19C2.08 |prp38||U4/U6 x U5 tri-snRNP complex subunit Prp38 |... 25 9.6
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 25 9.6
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 9.6
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 25 9.6
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 25 9.6
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 29.1 bits (62), Expect = 0.45
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 46 EGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTE 105
E + + +++ A+ A +EANR E+EEA KR I++R R A + E + E
Sbjct: 783 EQKLAEAIREAEEEAARAAEEEANRELHEQEEAQKR--AIEERTRAAREAKEREQREMAE 840
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 27.9 bits (59), Expect = 1.0
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Query: 21 GGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKKACDE--ANRIKKEKEEA 78
G V L+ I LS T + ++ + + + AK + ANR K +
Sbjct: 432 GLVSSALDKITGLLSADNLSETVSQARDFSHTLSKSLKSRAKSLSQKEAANRSKLIAKRG 491
Query: 79 DKRLKEIQQRKEQERLANDFEP 100
D +E EQ+ L+ DF P
Sbjct: 492 DNLRREASLSSEQDDLSEDFPP 513
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 45 REGEWEQVVKDT---FYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLAND 97
+ G+ E+ +KD+ F + + + +++ KEE K + E+ R E +LA +
Sbjct: 1338 QRGDLEKALKDSEKNFLRKEAEMTENIHSLEEGKEETKKEIAELSSRLEDNQLATN 1393
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 35 SRKTDFFTGGREGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERL 94
+RK + G E E+ ++ + EA R+K+EKE + ++ ++ +EQE++
Sbjct: 62 NRKKRIYNGSAEAGKEKKLQKQRAQEERIRQKEAERLKREKERQQR--EQEKKLREQEKI 119
Query: 95 A 95
A
Sbjct: 120 A 120
>SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 678
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 27 LNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKKACDEANRIKKE--KEEADKRLKE 84
L+T+ +FL TDF T + + ++ D + A+ + R KE K E ++LK
Sbjct: 102 LDTVANFLDFSTDFSTLSTKKDETEIAPDCLHYIAELLFQKKEREVKEKWKNELTEKLKT 161
Query: 85 I 85
+
Sbjct: 162 L 162
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 66 DEANRIKKEKEEADKRLKEIQQRK-EQERLANDFEPATVTE 105
+E N+ K++A L+E +++K EQ+RL+ FE T E
Sbjct: 523 EEYNKWFARKQQARVELEEQRRKKKEQDRLSGKFEKMTQKE 563
Score = 26.6 bits (56), Expect = 2.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 17 QQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKKACDEANRIKKEKE 76
++H+ K T+VSF+ TG + ++ Q+ KK+ + KK K
Sbjct: 254 EKHKSDNKKTFGTLVSFVEPT---ITGSEQSDYRQI-------KIKKS-----KKKKSKS 298
Query: 77 EADKRLKEIQQRKEQERLANDF 98
+ KRL E+ E E +DF
Sbjct: 299 DRRKRLVELDAENENENDPSDF 320
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 61 AKKACDEANRIKKEKEEADKRLKEIQQRKEQE 92
A+KA + + + K+ ++RLK Q++K+QE
Sbjct: 625 AQKALEAKRQEEARKKREEQRLKREQEKKQQE 656
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 61 AKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 99
A++A +A K++ EEA K+ +E + ++EQE+ + E
Sbjct: 621 AEQAAQKALEAKRQ-EEARKKREEQRLKREQEKKQQELE 658
>SPBC2G5.01 |||DUF1682 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 374
Score = 26.6 bits (56), Expect = 2.4
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 42 TGGREGEWEQVVKDTFYTHAKKACDEANRIKKEKE-EADKRLKEIQQRKEQER 93
T R+ +EQVV + AKK + I K E + KR++ +QRK + R
Sbjct: 318 TSARKLAFEQVVHASAAKAAKKKVKSSGDISKLSESDQKKRMERERQRKMRRR 370
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 67 EANRIKKEKEEADKRLKEIQQRKEQERLANDFE 99
E + IK+ KE++ + K Q EQ+ L N E
Sbjct: 279 EKSAIKQNKEQSSEGSKTANQTHEQKELINSLE 311
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 52 VVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDF 98
++ D ++ + N + ++K E ++RLKEIQ KE E N F
Sbjct: 974 ILIDELESYRSNQFNYQNNLVQDKNELEERLKEIQ--KELEVYNNHF 1018
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 66 DEANRIKKEKEEA--DKRLKEIQQRKEQERLAN 96
+E RI++EKE+A KRL+ +++K++E+ N
Sbjct: 84 EEKRRIQQEKEDAKVQKRLEIEKKQKDREQTRN 116
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 131 SGDSSDVTEPATPEEDDDPKE--KGKLKPNAGNGCDLEH 167
SGD+ D + P EDDD E G+++ +G D+++
Sbjct: 425 SGDADDFQANSNPFEDDDKLEGANGEMEVTFTSGFDVDN 463
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 67 EANRIKKEKEEADKRLKEIQQRKEQERL 94
E R+K E+E K L E +++KE+ER+
Sbjct: 126 ERQRLKDEEERRKKELME-KEKKEKERI 152
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 30 IVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEI 85
I F+ + F+ + +WE+++K K A R + +EE + K+I
Sbjct: 479 IDEFMDAELKFYKECQTSQWEEIIKSVHECIYKWAQTNLQRWLRTREELENLSKDI 534
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 55 DTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKE 90
D + K ++ + +EKEEA+ L+ +++R E
Sbjct: 564 DNYNEELDKLVEDVRKKLQEKEEAESSLRSVRERLE 599
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/28 (32%), Positives = 20/28 (71%)
Query: 70 RIKKEKEEADKRLKEIQQRKEQERLAND 97
+ K+++EA+KR ++++ E+ERL +
Sbjct: 39 KTNKKEQEAEKRKAALERKAERERLEKE 66
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 58 YTHAKKACDEANRIKKEKEEADKRLKEIQQR 88
Y AC+EA+ + + + K L+EI+ +
Sbjct: 483 YNKCIDACNEASEVDRREPNTGKNLREIESQ 513
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 7.3
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 66 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXXXX 125
DE +KE+EE +K EI E E N F E ++
Sbjct: 273 DEELEGEKEEEEEEKEKPEISNYDETEGKVN-FS----LEDSESLEFDEGSDDYDYAKLT 327
Query: 126 XXXVGSGDSSDVTEPATPEEDDDPKEKGKLKP-NAGNGCDLEHY 168
VG+ DS E EED+D E+ L +A + ++E Y
Sbjct: 328 TELVGNTDSLAEDEDDILEEDEDEDEEELLAIFDASDDSEIEAY 371
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 73 KEKEEADKRLK--EIQQRKEQERLANDFE 99
K+K E DKR + E+E+L NDFE
Sbjct: 121 KDKFEKDKRAAVCPTTTKSEEEKLENDFE 149
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 56 TFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATV 103
T +T + + + E + DK LKE + + + + ND+E + V
Sbjct: 57 TSFTEQIETSETSKTQDSEGNKVDKNLKENKSIRRKRSIDNDYELSNV 104
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/23 (39%), Positives = 19/23 (82%)
Query: 71 IKKEKEEADKRLKEIQQRKEQER 93
+KKE++E KR ++ +Q+KE+++
Sbjct: 282 LKKEEKERKKRAEKKEQQKEKKK 304
>SPBC19C2.08 |prp38||U4/U6 x U5 tri-snRNP complex subunit Prp38
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 136 DVTEP---ATPEEDDDPKEKGKLKPNAG 160
D+ EP ++ EEDDD ++ KL+ N G
Sbjct: 177 DLLEPLSSSSDEEDDDEEQISKLESNEG 204
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 72 KKEKEEADKRLKEIQQRKEQERLAN 96
K++ +E +R KE+++ KE++R A+
Sbjct: 42 KRKLDEIKEREKELKREKEEQRAAH 66
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 9.6
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 48 EWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDF 98
E EQV ++T K +++ E ++A +RL E++ + E NDF
Sbjct: 451 EAEQVEEETRPIREKYELEKSRG--SELQDAKRRLDELKAKAEDAERRNDF 499
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 133 DSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVENIDAN 183
+ + E ATPE K+ + KP G + + T E+ EN++ +
Sbjct: 84 EEEEEEEDATPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDSENLEGD 134
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 24.6 bits (51), Expect = 9.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 42 TGGREGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQ-QRKEQERLANDFEP 100
T E E + D+ Y A++ +E ++E DK+L+ ++ KE E N+ E
Sbjct: 174 TAHAEEEKGPLTPDSEYA-ARQLTEELANKSSQEEGVDKQLRVVEATEKEHEEDGNE-EN 231
Query: 101 ATVTE 105
TVT+
Sbjct: 232 VTVTK 236
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.129 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,142
Number of Sequences: 5004
Number of extensions: 33613
Number of successful extensions: 179
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 142
Number of HSP's gapped (non-prelim): 47
length of query: 193
length of database: 2,362,478
effective HSP length: 69
effective length of query: 124
effective length of database: 2,017,202
effective search space: 250133048
effective search space used: 250133048
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 51 (24.6 bits)
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