GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000381-TA|BGIBMGA000381-PA|undefined
         (193 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.4  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/48 (22%), Positives = 24/48 (50%)

Query: 61  AKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTD 108
           +KK  +   ++ +E +  D+ L ++  ++  +RL N   P    E+ D
Sbjct: 374 SKKLEESMRKLDEEMKRTDELLYQMIPKQVADRLRNGENPIDTCEMFD 421


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/35 (22%), Positives = 19/35 (54%)

Query: 59   THAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 93
            T  K ACD    +    ++  ++  + QQ+++Q++
Sbjct: 1481 TDKKSACDSKLIVDHSSQKTQQQQPQQQQQQQQQQ 1515


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.129    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,274
Number of Sequences: 429
Number of extensions: 2189
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 193
length of database: 140,377
effective HSP length: 54
effective length of query: 139
effective length of database: 117,211
effective search space: 16292329
effective search space used: 16292329
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 42 (21.0 bits)