Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000379-TA|BGIBMGA000379-PA|IPR013090|Phospholipase A2,
active site, IPR003006|Immunoglobulin/major histocompatibility
complex, IPR001849|Pleckstrin-like, IPR003116|Raf-like Ras-binding,
IPR001478|PDZ/DHR/GLGF, IPR000219|DH
(1598 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 37 0.020
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 32 0.57
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 32 0.75
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 31 0.99
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 31 0.99
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 31 1.3
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 31 1.7
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 31 1.7
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 30 2.3
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 30 2.3
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 30 2.3
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 30 3.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 4.0
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 29 4.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 4.0
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 29 4.0
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 29 5.3
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 29 7.0
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 29 7.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 7.0
SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomy... 29 7.0
SPAC607.06c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 29 7.0
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 28 9.2
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 28 9.2
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 28 9.2
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 28 9.2
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 37.1 bits (82), Expect = 0.020
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 346 KAGFLSVKKWLLRKKHQIELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVE-AAPKHLI 404
+ G +S KK +L K ++ WK + + L+FY D + + +P H
Sbjct: 1046 RRGMISYKKMVLSKNNRWVAGY---WKKKYCIVDSGKLIFYKSDHLDPNACSNVSPIHRE 1102
Query: 405 I-VDGAIMQP-IPE--HPKRDYIFCLSTAFGDAYLFQAPCQIELENWVNSIH 452
+ + P +P + R+ +F L+ + YLF+AP + + W++S++
Sbjct: 1103 FGLQSCLASPNLPPSINSNRNNVFYLNIPGNECYLFEAPSVLAMNEWIHSLN 1154
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 32.3 bits (70), Expect = 0.57
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 921 RKVLLEVVDTERAYVXXXXXXXXXXXXXXXXXTFLSNAEINALFGNIQEIVTFQRQFLQN 980
R+V E+ +TE Y+ LS I ++F N+ EI+ FQR+FL
Sbjct: 230 RRVTAELYETELKYIQDLEYLSNYMVILQQKQ-ILSQDTILSIFTNLNEILDFQRRFLVG 288
Query: 981 LE 982
LE
Sbjct: 289 LE 290
Score = 31.9 bits (69), Expect = 0.75
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 1016 LVESLKGMEKVAEHINEMQRIHEEYGAIFDHLFRQHQKSCKQPIDLSPGDLLYYGGVEWL 1075
L + + + +VA +NE +RIHE AI + Q + ID L Y+G L
Sbjct: 385 LKQGMACVVRVANQVNETRRIHENRNAIIE--LEQ------RVIDWKGYSLQYFG---QL 433
Query: 1076 NISDFLGKIKKGLELHAMCFVFKSAVVFLCKERLRQKKKLMGVSSKNNSNEVEIIR 1131
+ D + K +E ++F+ ++ CKE K++ +S + ++ ++
Sbjct: 434 LVWDVVNVCKADIEREYHVYLFEK-ILLCCKEMSTLKRQARSISMNKKTKRLDSLQ 488
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 31.9 bits (69), Expect = 0.75
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 901 SVASAAAGTPSRHLSDADKLRKVLLEVVDTERAYVXXXXXXXXXXXXXXXXXTFLSNAEI 960
S+A + A + + K ++ E+V TE AY+ + L+ +
Sbjct: 293 SLAMSEASSINPEYKRIKKRANLIKELVTTEAAYLNDLIAIQQSYGLRVKECSALNPVDA 352
Query: 961 NALFGNIQEIVTFQRQFLQNLEEALEAEPNFN 992
+FG+I+ ++TF +F L +A E N
Sbjct: 353 QTVFGDIESLLTFTVEFHSRLYQAGEGSWRVN 384
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 31.5 bits (68), Expect = 0.99
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 10/128 (7%)
Query: 1406 SINRDRSPNRSLDRASPDRDRVTKVIVCKSPNKSSLKQTKTLHRSPRGSFDQSRSPRGSI 1465
+I D R L +++ + K+I+ S S Q P + +R+ R SI
Sbjct: 102 AIGGDEMLTRDLKKSNENTVVHGKIIINLSTTAQSTLQV------PSSAASGARTQRTSI 155
Query: 1466 DKSKSPQQSFDGSRSPRGSIMKSRENSVDRSRSPKPAPKKGIMRTPQASFDRSPCKSPGA 1525
QS SR+P S R S R +P +P RT + D+ PG
Sbjct: 156 TNDPQSSQSSSVSRNPASS----RAGSPTRDNAPAASPASSEPRTFSSFEDQYGRLPPGW 211
Query: 1526 SRRSSKSG 1533
RR+ G
Sbjct: 212 ERRTDNLG 219
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 31.5 bits (68), Expect = 0.99
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 1448 HRSPRGSFDQSRSPRGSI-DKSKSPQQSFDG--SRSPRGSIMKSRENSVDRSRSP 1499
HR+PR +S SPR +S SP S D SRSP S + R + RSR P
Sbjct: 110 HRTPR-HHRRSYSPRSDYGSRSPSPHSSVDSHQSRSPVRSRDRDRSSRSSRSRHP 163
Score = 29.5 bits (63), Expect = 4.0
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 1410 DRSPNRSLDRASPDRDRVTKVIVCKSPNKSSLKQTKTLHRSPRGSFDQSRSPR----GSI 1465
D +RS R S DRDR ++ + P+ S + RSP S SRS R S
Sbjct: 138 DSHQSRSPVR-SRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEERSS 196
Query: 1466 DKSKSPQQSFDGSRSPRGSIMKSRENSVDRSRSPKPAPKKGIMRT 1510
S++ ++ R S + R S R RS K + ++ RT
Sbjct: 197 RSSRAHDYDYEDLRDDDRSHERKRSRSRPRERSSKLSEEERDRRT 241
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 1260 SRENSQDAEETQDSGPEEPFRQRSKTIGDVVENGG--KRVASSA 1301
+ + Q AE+ ++SG E+ RQ SK+ +V+ GG K+VAS++
Sbjct: 541 AEKRKQMAEKRRNSGTEQVVRQLSKSNVEVIGKGGERKKVASNS 584
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.7 bits (66), Expect = 1.7
Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 3/177 (1%)
Query: 1401 SCSGSSINRDRSPNRSLDRASPDRDRVTKVIVCKSPNK---SSLKQTKTLHRSPRGSFDQ 1457
S SGSS + S + + +S D D + +S + S + + S S
Sbjct: 103 SGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGS 162
Query: 1458 SRSPRGSIDKSKSPQQSFDGSRSPRGSIMKSRENSVDRSRSPKPAPKKGIMRTPQASFDR 1517
S S +S+S + D S S S +S D S S + + +S
Sbjct: 163 DSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSS 222
Query: 1518 SPCKSPGASRRSSKSGGEKLARLGTNSLDRATHYSQLAKVEDKAMKMGIVVSKSTES 1574
S +S +S + S + ++S D + S + + K S S++S
Sbjct: 223 SSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDS 279
Score = 30.7 bits (66), Expect = 1.7
Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 12/168 (7%)
Query: 1401 SCSGSSINRDRSPNRSLDRASPDRDRVTKVIVCKSPNKSSLKQTKTLHRSPRGSFDQSRS 1460
S S SS + S + D +S ++ N SS + + S S D S
Sbjct: 200 SSSSSSDSESESSSEGSDSSSSSSSSESES--SSEDNDSSSSSSDS--ESESSSEDSDSS 255
Query: 1461 PRGSIDKSKSPQQSFDGSRSPRGSIMKSRENSVDRSRSPKPAPKKGIMRTPQAS-FDRSP 1519
S +S+S + D S + S ++S D S S + + T +S D S
Sbjct: 256 SSSSDSESESSSKDSDSSSNSSDS---EDDSSSDSSDSESESSSEDSDSTSSSSDSDSSS 312
Query: 1520 CKSPGASRRSSKSGGEKLARLGTNSLDRATHYS----QLAKVEDKAMK 1563
G S + + GE A+ TNS S +K+ DK++K
Sbjct: 313 SSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLK 360
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 30.7 bits (66), Expect = 1.7
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 11/132 (8%)
Query: 1443 QTKTLHRSPRGSFDQSRSPRGSIDKSKSPQQSFDGSRSPRGSIMKSRENSVDRSRSPKPA 1502
Q + LH P F+QS +++ K+ Q S D + ++ + ++ P+
Sbjct: 474 QREDLHAEPLTYFNQSNVEVDNVELRKNTQPSSDAANRDLYQVLPEKSTNISGFMGPQHQ 533
Query: 1503 PKKGIMRTPQASFDRSPCKSPGASRRSSKSGGEKLARLGTNSLDRATHYSQLAKVEDKAM 1562
P A D P K S SS + G+ +N D S+L V ++AM
Sbjct: 534 -----YDIPTAE-DTLPQKRNAHSMLSSTNKGDVALNQSSNWQD---ELSEL--VSEQAM 582
Query: 1563 KMGIVVSKSTES 1574
K+G + T+S
Sbjct: 583 KVGAAKRQKTQS 594
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 1440 SLKQTKTLHRSPRGSFDQSRSPRGSIDKSKSPQQSFDGSRSP----RGSIMKSRENSVDR 1495
+LKQ+ + R+P+ + S SK P+ S S +P G + SR + ++
Sbjct: 241 TLKQSTIIPRTPQKTVRSIVKQTSSPHSSKMPKHSLPSSPTPFNSNSGDSLLSRIKNSNQ 300
Query: 1496 SRSPKPAPKKGIMRTPQAS 1514
S S +P G Q+S
Sbjct: 301 SSSERPTANNGAQEQNQSS 319
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 652 VRRSLNPLEHFVRVKKRRDMEDHNYFVPHRSDLIETYLHTHEVVEVCAKILYQVELQRNT 711
+ +SLN L+H V + +M+ H+Y+ +++ +T T + + EL+R
Sbjct: 767 MEKSLNVLQHKVLQLQAVNMKLHDYYEKEPTEIYKTVSVTSTQIMPAVTKMSSFELEREQ 826
Query: 712 LEQMWGF 718
+ +GF
Sbjct: 827 FHKAFGF 833
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 30.3 bits (65), Expect = 2.3
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 1457 QSRSPRGSIDKSKSPQQSFDGSRSPRGSIMKSRENSVD-RSRSP---KPAPKKGIMRTPQ 1512
+SRSP +S+SP R +SR S D RSRSP + +PK+
Sbjct: 114 RSRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPDGRSRSPDYDRRSPKRNHRSPSP 173
Query: 1513 ASFDRSPCKSP 1523
SF +P KSP
Sbjct: 174 VSF--APQKSP 182
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 647 LAAACVRRSLNPLEHFVRVKKRRDMEDHNYFVPHRSDLI---ETYLHTHEVVEVCAKI-- 701
LA + +++ E R+ R D NY V R DLI + +LHT + +
Sbjct: 480 LAMEALEQTVRETETCQRLWNERTNNDENYLVNQREDLIHQCKKFLHTLKTARYYLETVQ 539
Query: 702 LYQVELQRNTLEQMWGFSVEAELIE 726
L+Q++ Q+W A++ E
Sbjct: 540 LHQLKKYVTYFSQIWSTDELADISE 564
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 1262 ENSQDAEETQDSG--PEEPFRQRSKTIGDVVENGGKRVASSAAAPVESDKEPAGSRSEGE 1319
EN Q+ EE+ + G +E Q ++N K A S A E+D+E GE
Sbjct: 4167 ENVQENEESTEDGVKSDEELEQGEVPEDQAIDNHPKMDAKSTFASAEADEENTDKGIVGE 4226
Query: 1320 DE 1321
+E
Sbjct: 4227 NE 4228
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1257 GNISRENSQDAEETQDSGPEEPFRQRSKTIGDVVENGGKRVASSAAAPVESD-KEPAGSR 1315
G+I+++ S + +T GP + S ++ V + ++SSA ++S+ EP G
Sbjct: 357 GDIAQDCSYISSKTNGGGPSDSPSSSSTSVRGSVNDSNSPISSSATFAIQSNGVEPVGLS 416
Query: 1316 SEGEDEPP 1323
++ ++ P
Sbjct: 417 TQEQNLSP 424
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 4.0
Identities = 39/180 (21%), Positives = 59/180 (32%), Gaps = 7/180 (3%)
Query: 1401 SCSGSSINRDRSPNRSLDRASPDRDRVTKVIVCKSPNKSSLKQTKTLHRSPRGSFDQSRS 1460
S S SS+ + + SL +S T SP SSL + S S S S
Sbjct: 69 SASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSS 128
Query: 1461 ------PRGSIDKSKSPQQSFDGSRSPRGSIMKSRENSVDRSRSPKPAPKKGIMRTPQAS 1514
S+ S S S + S+ S NS S +P + + + AS
Sbjct: 129 LASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNST-TSATPTSSATSSSLSSTAAS 187
Query: 1515 FDRSPCKSPGASRRSSKSGGEKLARLGTNSLDRATHYSQLAKVEDKAMKMGIVVSKSTES 1574
+ +S S+ S + L + + + S LA + S S S
Sbjct: 188 NSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISS 247
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 29.5 bits (63), Expect = 4.0
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 1045 DHLFRQHQKSCKQPI-DLSPGDLLYYGGVEWLNISDFLGKIKKGLELHAMCFVFKSAVVF 1103
DH F Q K+ + + L ++ + L I DF +I E ++ F F V
Sbjct: 953 DHKFYQQVKNMQLELASLKQISAAFFTRIP-LKIKDFKKEINAFNEKGSLDFQFGRGFVL 1011
Query: 1104 LCKERLRQKKKLMGVSSKNNSNEVEIIRYQVLIPVTEVQVRASSAKDMDSHFLWELIHLR 1163
K+R+ ++ K + ++++E++R VL+ + +S + +S +L + I
Sbjct: 1012 SSKDRIEREVKNVVEKFDEVNDQIELMRSDVLLRKVRPGLDQTSQLNEESAYLEKRI--- 1068
Query: 1164 SQLQRRSEKV 1173
L+R E+V
Sbjct: 1069 QTLERSLEEV 1078
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 1157 WELIHLRSQLQRRSEKVYVLSNSTAD 1182
WELI LR++L + EK+ L T D
Sbjct: 272 WELISLRNELSKLDEKILSLQRETDD 297
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 28.7 bits (61), Expect = 7.0
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1400 RSCSGSSINRDRSPNR--SLDRASPDRDRVTKVIVCKSPNKSSLKQTKTLHRSPRGSFDQ 1457
RS S ++ NR ++ S++R R RV V +P+ S + T R+P
Sbjct: 473 RSASAAA-NRPKTATTTDSVNRTPSQRGRVA---VPSTPSVRSASRAMTSPRTPLPRVKN 528
Query: 1458 SRSPRGSIDKSKSPQQSFDGSRSPRGS--IMKSRENSVDRSRS 1498
+++P SI S R P + + +R NS RSRS
Sbjct: 529 TQNPSRSISAEPPSATSTANRRHPTANRIDINARLNSASRSRS 571
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 28.7 bits (61), Expect = 7.0
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 1455 FDQSRSPRGSIDKSKSPQQSFDGSRSPRGSIMKSRENSVDR-SRSPKPAPKKGIMRTPQA 1513
F Q+R P D SK+ SF S P + +N + SRSP +P
Sbjct: 380 FSQNRKPYSQSDISKAQSSSF--SEEPSNIYDEYEQNLLSPWSRSPVASPSIQTDPNRNP 437
Query: 1514 SFDRSPCKSPGASRRSS-KSGGEKLARLGTNSLDRATHYSQLAKVED 1559
F +S A+ S+ KS E ++ N + ++S + ED
Sbjct: 438 FFQNCLQESSFATESSTEKSASESVSETAVNDDCKGMNFSGNRRQED 484
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 1275 PEEPFRQRSKTIGDVVENGGKRVASSAA------APVESDKEPAGSRSEGEDEPPPPPVK 1328
P +K+ + + +GG+ +A+ A APV PA E ++ P PP
Sbjct: 864 PASAITPETKSTVNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKAPSPPAT 923
Query: 1329 RSLGRTP 1335
R TP
Sbjct: 924 RPKSTTP 930
>SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1010
Score = 28.7 bits (61), Expect = 7.0
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 462 HRGKTGTLHLLQEEIYRLEKAIESDHKLKHMADLQQSVVSDPETRDQLAAQMLQWDENLE 521
H G T L++ L ++I KLK + +Q +S +L AQ+ + D+ L+
Sbjct: 463 HYGVNATFKALEQ----LVQSIRDSEKLKERLETEQQNMSGSFQATRLTAQLSRLDQRLD 518
Query: 522 R----LHCEQFRLRCYMASLQSGELPNPKSL-LTHVSRGTKSTLNKLGV---FTVSSFHA 573
+HC + L + +S N ++ L+ ++ G ST K+ + F ++ A
Sbjct: 519 LDRSFVHCYEIMLTQTSDTSRSFSFLNFVAIWLSRLADGQSSTYPKMPLSLPFNENAPEA 578
Query: 574 FIC 576
F C
Sbjct: 579 FKC 581
>SPAC607.06c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 612
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 543 PNPKSLLTHVSRGTKSTLNKLGVFTVSSFHAF 574
P+ + + HV+ G + ++KLGVF S H+F
Sbjct: 228 PSTQKIRGHVALGGGTDMHKLGVFGSHSLHSF 259
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 28.3 bits (60), Expect = 9.2
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 363 IELARKRGWKGYWVCLKGTTLLFYPCDSREGRSVEAAPKHLIIVDGAIMQPIPEHPKRDY 422
+++ K GW YWV L + Y + ++ + P L++ A ++P + R +
Sbjct: 527 LQVVGKSGWHKYWVVLDHGKICEY-ANWKQSLELHTEPIDLLM---ATVRP-AQSVSRKF 581
Query: 423 IFCLSTAFGDAYLFQAPCQIELENWVNSIHSACAAAFARHRGK 465
F + T +QA + E+ +W+ +I + + + + +GK
Sbjct: 582 CFEVITP-QTKRTYQATSKAEMHSWIEAIQYSISESIVQ-KGK 622
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 28.3 bits (60), Expect = 9.2
Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 15/185 (8%)
Query: 1413 PNRSLDRASPDRDRVTKVIVCKSPNKSSLKQTKTLHRSPRGSFDQSRSPRGSIDKSKSPQ 1472
P++S D A+P T +P KS+ + G S S+ K +
Sbjct: 341 PHKSQDSATPANVETTPSTATSAPKKSTAPFAINAVKPAPG---LSNISSASLPKPSFAK 397
Query: 1473 QSFDGSRSPRGSIMKSRENSVDRSRSPKPAPKKGIMRTPQASFDR-SPCKSPGASRRSSK 1531
Q+ GS+S S+ +R S R P P P+ R G ++S+K
Sbjct: 398 QAAVGSQSSTTSMTTARLLS---DRFPVVMPVANTAAIPEKVQVRFGSLTLGGEDKKSTK 454
Query: 1532 SGGEKLARLGTNSLDRATHYSQLAKVEDKAMKMGIVVSKSTESIAKAIEHTTCVQCYLSG 1591
S + +A+ G S + + + +A K V++ST+ K +HT+ Y S
Sbjct: 455 SSSDNIAQSGPRS---SYFPKKTVSPKPEAKKEASKVAESTKIPKK--QHTS---AYESR 506
Query: 1592 KRQSK 1596
QSK
Sbjct: 507 APQSK 511
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 968 QEIVTFQRQFLQNLEEALEAEPNFNHF--EFSNQFKLRNLTDVNSEEHLHLVESL 1020
+ I+ R+ Q +++ + + N +F +F N++KLR+L +EE + + E L
Sbjct: 35 ESILCETRKIEQEIKDQVVQKENKTYFNNKFDNRYKLRDLEKNLAEEEVRITEML 89
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 28.3 bits (60), Expect = 9.2
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 1399 IRSCSGSSI-NRDRSPNRSLDRASPDRDRVTKVIVCKSPNKSSLKQTKTLHRS---PRGS 1454
+++ S SI N +++ S + + D T+ + + S ++ ++ +S P G
Sbjct: 418 LKNASKQSIQNENKASYSSYEDSEIQNDDETRTVGTPTETISVVRLRRSSSQSNIEPNGV 477
Query: 1455 FDQSRSPRGSIDKSKSPQQSFDGS----RSPRGSIMKSRENSVDRSRSPKPAPKK 1505
+ SP GS + S + GS +S + S+ S N+ R KP P K
Sbjct: 478 RSPTSSPTGSPIRRTSGNRWSSGSSHSKKSAQRSVSMSSLNNTSNGRVAKPKPSK 532
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,208,746
Number of Sequences: 5004
Number of extensions: 241308
Number of successful extensions: 809
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 46
length of query: 1598
length of database: 2,362,478
effective HSP length: 82
effective length of query: 1516
effective length of database: 1,952,150
effective search space: 2959459400
effective search space used: 2959459400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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